Silkworm BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002575-TA|BGIBMGA002575-PA|IPR012258|Acyl-CoA oxidase,
IPR009100|Acyl-CoA dehydrogenase/oxidase, middle and N-terminal,
IPR009075|Acyl-CoA dehydrogenase/oxidase C-terminal,
IPR006091|Acyl-CoA dehydrogenase/oxidase, central region,
IPR002655|Acyl-CoA oxidase, C-terminal
         (665 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF515471-1|AAM61879.1|  225|Anopheles gambiae glutathione S-tran...    28   0.91 
AF491816-1|AAM09542.2|  225|Anopheles gambiae glutathione S-tran...    28   0.91 
AY645023-1|AAT92559.1|   99|Anopheles gambiae wingless protein.        26   2.8  

>AF515471-1|AAM61879.1|  225|Anopheles gambiae glutathione
           S-transferase 3-8 protein.
          Length = 225

 Score = 27.9 bits (59), Expect = 0.91
 Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 2/76 (2%)

Query: 167 DAKAEEFILNTPTLTSFKWWPGGLAHTANHCVVVAQLYTKGKCYGVHPFLVQIRDLETHM 226
           D   EEF+   P  T      GG+  TA+H + +  +   G+  G++P  + +R    H 
Sbjct: 42  DKLMEEFLKVNPQQTIPVLDDGGIVITASHAITIYLVCKYGRDDGLYPSEL-VRRARVHT 100

Query: 227 PMPGIKIGEIGSKLGY 242
            +  ++ G I S+L +
Sbjct: 101 AL-HLEAGVIFSRLSF 115


>AF491816-1|AAM09542.2|  225|Anopheles gambiae glutathione
           S-transferase E7 protein.
          Length = 225

 Score = 27.9 bits (59), Expect = 0.91
 Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 2/76 (2%)

Query: 167 DAKAEEFILNTPTLTSFKWWPGGLAHTANHCVVVAQLYTKGKCYGVHPFLVQIRDLETHM 226
           D   EEF+   P  T      GG+  TA+H + +  +   G+  G++P  + +R    H 
Sbjct: 42  DKLMEEFLKVNPQQTIPVLDDGGIVITASHAITIYLVCKYGRDDGLYPSEL-VRRARVHT 100

Query: 227 PMPGIKIGEIGSKLGY 242
            +  ++ G I S+L +
Sbjct: 101 AL-HLEAGVIFSRLSF 115


>AY645023-1|AAT92559.1|   99|Anopheles gambiae wingless protein.
          Length = 99

 Score = 26.2 bits (55), Expect = 2.8
 Identities = 10/18 (55%), Positives = 11/18 (61%)

Query: 394 DASIHIDDCRLACGGHGY 411
           D SI +D C L C G GY
Sbjct: 46  DTSIGVDGCDLMCCGRGY 63


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.134    0.396 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 674,367
Number of Sequences: 2123
Number of extensions: 28114
Number of successful extensions: 44
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 41
Number of HSP's gapped (non-prelim): 3
length of query: 665
length of database: 516,269
effective HSP length: 68
effective length of query: 597
effective length of database: 371,905
effective search space: 222027285
effective search space used: 222027285
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 51 (24.6 bits)