Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002575-TA|BGIBMGA002575-PA|IPR012258|Acyl-CoA oxidase,
IPR009100|Acyl-CoA dehydrogenase/oxidase, middle and N-terminal,
IPR009075|Acyl-CoA dehydrogenase/oxidase C-terminal,
IPR006091|Acyl-CoA dehydrogenase/oxidase, central region,
IPR002655|Acyl-CoA oxidase, C-terminal
(665 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_27283| Best HMM Match : No HMM Matches (HMM E-Value=.) 253 3e-67
SB_35341| Best HMM Match : Acyl-CoA_dh_M (HMM E-Value=2.9e-14) 196 4e-50
SB_55185| Best HMM Match : Acyl-CoA_dh_M (HMM E-Value=4.5e-16) 174 2e-43
SB_6242| Best HMM Match : No HMM Matches (HMM E-Value=.) 163 5e-40
SB_27285| Best HMM Match : No HMM Matches (HMM E-Value=.) 109 7e-24
SB_23464| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 3e-08
SB_30220| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 8e-07
SB_1643| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.020
SB_24934| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.42
SB_15052| Best HMM Match : Pox_A32 (HMM E-Value=0.0023) 33 0.56
SB_58137| Best HMM Match : DUF536 (HMM E-Value=2.8) 32 1.7
SB_56849| Best HMM Match : E-MAP-115 (HMM E-Value=1.2) 32 1.7
SB_31679| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.7
SB_31513| Best HMM Match : Transgly_assoc (HMM E-Value=0.49) 32 1.7
SB_15124| Best HMM Match : E-MAP-115 (HMM E-Value=1.6) 32 1.7
SB_11449| Best HMM Match : RtcR (HMM E-Value=1.9) 32 1.7
SB_1335| Best HMM Match : E-MAP-115 (HMM E-Value=1.6) 32 1.7
SB_58755| Best HMM Match : DUF536 (HMM E-Value=2.8) 32 1.7
SB_56701| Best HMM Match : E-MAP-115 (HMM E-Value=0.63) 32 1.7
SB_35145| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.7
SB_34762| Best HMM Match : IncA (HMM E-Value=1.1) 32 1.7
SB_31662| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.7
SB_23275| Best HMM Match : IncA (HMM E-Value=0.43) 32 1.7
SB_19764| Best HMM Match : E-MAP-115 (HMM E-Value=0.62) 32 1.7
SB_19114| Best HMM Match : E-MAP-115 (HMM E-Value=0.44) 32 1.7
SB_17094| Best HMM Match : NapE (HMM E-Value=7.7) 31 2.2
SB_11450| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.2
SB_34740| Best HMM Match : DEAD (HMM E-Value=0.00031) 31 2.2
SB_19986| Best HMM Match : bZIP_2 (HMM E-Value=5.7e-17) 31 3.0
SB_5982| Best HMM Match : PAP2 (HMM E-Value=8.3e-19) 31 3.0
SB_16898| Best HMM Match : IncA (HMM E-Value=0.36) 31 3.9
SB_4429| Best HMM Match : DUF1279 (HMM E-Value=2.8) 31 3.9
SB_52788| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.9
SB_38634| Best HMM Match : DUF164 (HMM E-Value=0.6) 30 6.9
SB_33442| Best HMM Match : AAA (HMM E-Value=0) 30 6.9
SB_33561| Best HMM Match : Transgly_assoc (HMM E-Value=0.49) 30 6.9
SB_23665| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.9
SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.9
SB_44021| Best HMM Match : DUF622 (HMM E-Value=0.34) 29 9.1
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 29 9.1
>SB_27283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 426
Score = 253 bits (620), Expect = 3e-67
Identities = 162/445 (36%), Positives = 247/445 (55%), Gaps = 50/445 (11%)
Query: 4 VNPDLVKERQKCTFDVQELVHFIDRGEEHTLERKELEDLVLSVKELKDETPEEYLSHKER 63
+NPD+ +ER K +FD+QEL +F+D G+E T R+ LE L LS + ++ + + +
Sbjct: 27 MNPDIARERSKASFDIQELTYFLDGGKEKTSRRRYLESL-LSNDPVFEKDQDWFYGREGS 85
Query: 64 YENAIRKASLLFKILQKYFETHNLLDIFSPTNKYRVQFGVLKDVSPFLVHMGMFLPTLLH 123
YEN++RK I++ TH + T+KY +Q VL+ +G LPTLL+
Sbjct: 86 YENSLRKGVHFIDIVR----THKI------TDKYELQ--VLERA------IGYPLPTLLN 127
Query: 124 QTTPEQAAEWVPKAQSMQMIGTYAQTELGHGTFLRGLETTATYDAKAEEFILNTPTLTSF 183
++P +++ +GT Q E + + +Y IL T T
Sbjct: 128 DLM------FIP---TIKTLGTKRQQE-------KWIPLAKSYQ------ILGTYAQTEM 165
Query: 184 KWWPGGLAHTANHCVVVAQLYTKGKCYGVHPFLVQIRDLETHMPMPGIKIGEIGSKLGY- 242
G + HT +H +V+AQLY K YG+ F++QIRD T P PG+K+G+IG K +
Sbjct: 166 ----GHVGHTCSHAIVLAQLYIGKKSYGIQFFMLQIRDPVTRRPTPGVKLGDIGPKGSFL 221
Query: 243 -NTVNNGFLGFNKVRIPRTNLLMKNAQVLKDGTYVKAKSE---KLTYGTMVLIRVLIVTD 298
N+ NG+L + VR+PR ++L A+V+ DGT+VK+ +E K+ Y M+ +R I D
Sbjct: 222 INSQENGYLLLDHVRVPRDHMLSALAEVMADGTFVKSSNEDADKVLYSIMLYVRSTIPQD 281
Query: 299 MAYELARASTVAVRYSVVRHQSQPKPGQPEPQIIEYVTQQHKLFIAVATSHVYRITGHWL 358
+ +RA T+AVRYS VR QS+ KPGQ E QI++Y TQQ KL ++AT++ Y+ +
Sbjct: 282 AYFIASRAITIAVRYSAVRRQSELKPGQGELQILDYSTQQDKLLPSLATAYAYKFASDRI 341
Query: 359 WDTYYKVTSDLDKGNLEQLPELHAVSCCLKAVCSRDASIHIDDCRLACGGHGYMKSSSFP 418
Y + + G+ LPELH ++ +KA + A + D CRL CGGHG+ S
Sbjct: 342 RIEYERANTKWTTGDFSNLPELHVLTSAMKAYTTSGARLLADTCRLGCGGHGFSIFSLLT 401
Query: 419 FIQAIVTASVTYEGEYTVMMLQTAR 443
+ A+ +A+ TYEGE TV+ LQ AR
Sbjct: 402 ELFAVASAACTYEGENTVLYLQVAR 426
>SB_35341| Best HMM Match : Acyl-CoA_dh_M (HMM E-Value=2.9e-14)
Length = 490
Score = 196 bits (479), Expect = 4e-50
Identities = 88/162 (54%), Positives = 119/162 (73%), Gaps = 2/162 (1%)
Query: 109 PFLVHMGMFLPTLLHQTTPEQAAEWVPKAQSMQMIGTYAQTELGHGTFLRGLETTATYDA 168
P +H MF+PT+ T EQ +W+P A+ Q++GT+AQTELGHGTF+RGLETTATYD
Sbjct: 134 PSDLHRVMFMPTIKLMGTKEQQEKWLPLAEMHQILGTFAQTELGHGTFVRGLETTATYDK 193
Query: 169 KAEEFILNTPTLTSFKWWPGGLAHTANHCVVVAQLYTKGKCYGVHPFLVQIRDLETHMPM 228
+ ++F+L++P+LT+ KWWPG L H+ N+C+VVA+L K YG+H FL+Q RDL+TH P+
Sbjct: 194 QTQQFVLHSPSLTASKWWPGNLGHSTNYCIVVARLIIDDKEYGLHYFLLQTRDLKTHQPL 253
Query: 229 PGIKIGEIGSKLG--YNTVNNGFLGFNKVRIPRTNLLMKNAQ 268
PG+ IGEIG K YN +NGFL + VR+PR +LM AQ
Sbjct: 254 PGVTIGEIGPKTSRYYNVNDNGFLLLDHVRVPREQMLMGLAQ 295
Score = 53.6 bits (123), Expect = 5e-07
Identities = 25/77 (32%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Query: 4 VNPDLVKERQKCTFDVQELVHFIDRGEEHTLERKELEDLVLSVKELKDETPEEYLSHKER 63
+NPD+ +ER + +F VQEL++ +D G+++T R+ +E L LS + L + + +LS +E
Sbjct: 1 MNPDIARERSQASFSVQELINLLDGGKQNTERRRYVESL-LSQEPLFQKEQDFFLSREEA 59
Query: 64 YENAIRKASLLFKILQK 80
++ ++A +F+I+++
Sbjct: 60 FDLVGQRALRVFQIVKE 76
Score = 34.7 bits (76), Expect = 0.24
Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 507 KTGLDYEDSWNQASVQLVRASEAHCRVIICEKSWLEA--QRLTKSLSPALSKVLLELVEL 564
K+G+D ++N+ SV L+R + AH ++ K ++EA K+ P + VL + ++
Sbjct: 418 KSGIDPAIAFNELSVDLIRCANAHMSYLVV-KYFIEALDTDFAKASHP-IKSVLKSVCDI 475
Query: 565 YIIYWALEKKGDFL 578
+ ++ E+ G FL
Sbjct: 476 FALHGISEESGRFL 489
>SB_55185| Best HMM Match : Acyl-CoA_dh_M (HMM E-Value=4.5e-16)
Length = 647
Score = 174 bits (423), Expect = 2e-43
Identities = 166/619 (26%), Positives = 273/619 (44%), Gaps = 46/619 (7%)
Query: 16 TFDVQELVHFIDRGEEHTLERKELEDLVLSVKELKDETPEEYLSHKERYENAIRKASLLF 75
+FDV + +D + H E++E +LS L P+ +S E A+++ L
Sbjct: 48 SFDVPSMTRLLDH-DNH--EKREKFRKILSEDPLMK--PKYNISVDEERALALKRLKKLC 102
Query: 76 K--ILQKYFETHNLLDIFSPTNKYRVQFGVLKDVSPFLVHMGMFLPTLLHQTTPEQAAEW 133
+ HN IF+ V G + + V +F T+L T ++
Sbjct: 103 DQGFISVLDFRHNPRWIFAAHELAAVVDGSM--ATKMTVQFNLFGGTVLKLGTERHHSKL 160
Query: 134 VPKAQSMQMIGTYAQTELGHGTFLRGLETTATYDAKAEEFILNTPTLTSFKWWPGGLAHT 193
+ S++ +G + TELG+G +ETTATYD + +EFI+NTP+ + K+W A
Sbjct: 161 LKGIDSLEDVGCFGLTELGYGNNAVQMETTATYDNETQEFIVNTPSTLAQKYWITNGACD 220
Query: 194 ANHCVVVAQLYTKGKCYGVHPFLVQIRDLETHMPMPGIKIGEIGSKLGYNTVNNGFLGFN 253
A+H VV AQLY GK G+H LV IRD + MPG I ++G K+G N V+N F+
Sbjct: 221 AHHIVVFAQLYVNGKNEGIHGVLVPIRD-KNLKEMPGSSIHDMGPKMGLNGVDNAKFIFD 279
Query: 254 KVRIPRTNLLMKNAQVLKDGTYV-----KAKSEKLTYGTMVLIRVLIVTDMAYELARAS- 307
VR+PR NLL + V DG Y + LT +L L + M+ +++A
Sbjct: 280 NVRVPRENLLNLYSDVDADGNYTTVVDGNIRKRFLTVADQLLSGRLCIASMSQGVSKACI 339
Query: 308 TVAVRYSVVRHQSQPKPGQPEPQIIEYVTQQHKLFIAVATSHVYRITGHWLWDTY-YKVT 366
T+A RYS R P+ G+ + I++Y QQ L +A ++ Y ++ D + +K
Sbjct: 340 TIATRYSATRLTVGPE-GKSDTPILKYQLQQLALMPLLAKTYAYDFALSYVKDCWAFKAE 398
Query: 367 SDLDKGNLEQLPELHAVSCCLKAVCSRDASIHIDDCRLACGGHGYMKSSSFPFIQAIVTA 426
D N+ + C +KA+ CR CGG GY+ + F A
Sbjct: 399 DGSDHANIV------TMCCVIKALTGWHVGEAASICRERCGGQGYLSCNRFGPAIGYAHA 452
Query: 427 SVTYEGEYTVMMLQTARYLMKTLKQALSGKAITSTVAYLLDFDKNSNRNWQNTPEGIVIG 486
++T EG+ V+M + A + K + + +D + ++ + + +
Sbjct: 453 AMTAEGDNAVLMQKVATERLMVFKPSKEKSQVGEVDLSAVD---SLHKLLEAREQALF-- 507
Query: 487 FQAIAAGLTKAAYDEIEKHEKTGLDYEDSWNQASVQLVRAS-EAHCRVIICEKSWLEAQR 545
I GL K +K G D + W LV+AS A+ ++ E R
Sbjct: 508 ---IELGL---------KMKKAGKDRFNVWMYEEQDLVQASAHAYGDRLVSECFASAISR 555
Query: 546 LTKSLSPALSKVLLELVELYIIYWALEKKGDFLVYTKMQKDDVMQLQQRYEELLAVIRPN 605
SL P LSK L L+++ + G F + + ++ + L + P
Sbjct: 556 SDASLQPILSK----LYHLFLLTQVQKGLGYFTTSKLLPLETGAKVGKAATGLCREVSPQ 611
Query: 606 AVGLVDGFDIRDEILNSTL 624
A+ L D F + +E+L++ +
Sbjct: 612 ALSLCDAFGMTEEMLSAPI 630
>SB_6242| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 686
Score = 163 bits (395), Expect = 5e-40
Identities = 160/627 (25%), Positives = 277/627 (44%), Gaps = 34/627 (5%)
Query: 8 LVKERQKCTFDVQELVHFIDRGEEHTLERKELEDLVLSVKELKDETPEEYLSHKERYENA 67
L +E K +FD+ + +D + H E+++ +LS L P +S E + A
Sbjct: 61 LRQEWGKPSFDIATMTKLLD-SDNH--EKRQQFRKILSEDPLM--IPRYNISLDEERDLA 115
Query: 68 IRKASLLFK--ILQKYFETHNLLDIFSPTNKYRVQFGVLKDVSPFLVHMGMFLPTLLHQT 125
+ + L + HN L IF+ V + + V +F T+L
Sbjct: 116 LERLKKLCSQGFISVLDFRHNPLWIFAAHELAAVVDAAM--ATKMTVQFNLFGGTVLKLG 173
Query: 126 TPEQAAEWVPKAQSMQMIGTYAQTELGHGTFLRGLETTATYDAKAEEFILNTPTLTSFKW 185
T ++ + S+Q +G + TELG+G +ETTA YD + +EF++NTP+ + K+
Sbjct: 174 TERHHSKLLKGIDSLQEVGCFGLTELGYGNNAVQMETTAVYDKETKEFVVNTPSPLAQKY 233
Query: 186 WPGGLAHTANHCVVVAQLYTKGKCYGVHPFLVQIRDLETHMPMPGIKIGEIGSKLGYNTV 245
W A A+H VV AQ Y G G+H LV IRD + H+ PG++I ++G K+G N V
Sbjct: 234 WITNGACHAHHIVVFAQTYVDGVNQGIHGVLVPIRDHDLHV-KPGVRIDDMGHKMGLNGV 292
Query: 246 NNGFLGFNKVRIPRTNLLMKNAQVLKDGTYVKA-----KSEKLTYGTMVLIRVLIVTDMA 300
+N F+ V +PR NLL ++V +DGTY + + LT +L L + M+
Sbjct: 293 DNAKFYFDNVHVPRENLLNVYSEVEEDGTYTTSIEGSIRKRFLTVADQLLSGRLCIASMS 352
Query: 301 YELARA-STVAVRYSVVRHQSQPKPGQPEPQIIEYVTQQHKLFIAVATSHVYRITGHWLW 359
++A TVA+RYS R P G + I++Y QQ L +A ++ ++
Sbjct: 353 QGASKAVCTVAIRYSATRLAVGP-DGMSDTPILKYQLQQRALMPLLAMTYALDFALAYIK 411
Query: 360 DTYYKVTSDLDKGNLEQLPELHAVSCCLKAVCSRDASIHIDDCRLACGGHGYMKSSSFPF 419
D + +D G+ + ++ + C +KA+ + R CGG GY+ + F
Sbjct: 412 DRWAFQAAD---GS--EHSDVVIMCCVIKALTGWHIAKAASVGRERCGGQGYLSCNRFGS 466
Query: 420 IQAIVTASVTYEGEYTVMMLQTARYLMKTLKQALSGKAITSTVAYLLDFDKNSNRNWQNT 479
A +S+T EG+ +V+M + A + K + A + ++ + W +
Sbjct: 467 AIAGSHSSITAEGDNSVLMQKVASERLMKFKPSYFQIAASYVPGFI-----SRMFGWADL 521
Query: 480 PEGIVIGFQAIAAGLTKAAYDEI-EKHEKTGLDYE-DSWNQASVQLVRASEAHCRVIICE 537
+ AI +A + ++ K K G +W LV+A+ +
Sbjct: 522 SSTKYL--HAILEAREQALFLDLGMKMIKAGKKGRYATWMYKEQDLVQAAAQAYGDRLTS 579
Query: 538 KSWLEAQRLTKSLSPALSKVLLELVELYIIYWALEKKGDFLVYTKMQKDDVMQLQQRYEE 597
+ + R +P L +L +L LY+I + G M + + +
Sbjct: 580 ECF---NRALGKANPGLQPILGKLYHLYLIDTIEKNLGYLTTSGLMSAWTGSGVNKVAAD 636
Query: 598 LLAVIRPNAVGLVDGFDIRDEILNSTL 624
L + P A+ L D F + DE+L++ +
Sbjct: 637 LCREVAPQALALCDSFGLTDEMLSAPI 663
>SB_27285| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 207
Score = 109 bits (262), Expect = 7e-24
Identities = 59/149 (39%), Positives = 88/149 (59%), Gaps = 2/149 (1%)
Query: 500 DEIEKHEKTGLDYEDSWNQASVQLVRASEAHCRVIICEKSWLEAQRLTKSLSPALSKVLL 559
D+++ G+D DSWN+ SV LVR ++AH +I + +L+A + S S ++ VL
Sbjct: 4 DKMQADVILGMDPVDSWNKNSVDLVRCAKAHSSYLIVQ-FFLDALSQSNS-SREIASVLK 61
Query: 560 ELVELYIIYWALEKKGDFLVYTKMQKDDVMQLQQRYEELLAVIRPNAVGLVDGFDIRDEI 619
+LY +Y +E G F+ + + + ++ + L +IRP+AV LVD FD D +
Sbjct: 62 SQSDLYALYGIVEDSGSFMECGVLTVNQIAMIRDQVYSLYQIIRPDAVALVDAFDYSDFV 121
Query: 620 LNSTLGAYDGRVYERLMEEALKSPLNAEP 648
LNS LG YDG+VY+RL E A KSPLN P
Sbjct: 122 LNSALGRYDGQVYQRLFELAQKSPLNKSP 150
>SB_23464| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 660
Score = 57.6 bits (133), Expect = 3e-08
Identities = 27/42 (64%), Positives = 31/42 (73%)
Query: 604 PNAVGLVDGFDIRDEILNSTLGAYDGRVYERLMEEALKSPLN 645
P+AV LVD FD D +LNS LG YDG+VY+RL E A KS LN
Sbjct: 2 PDAVALVDAFDYSDFVLNSALGRYDGQVYQRLFELAQKSELN 43
>SB_30220| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 566
Score = 52.8 bits (121), Expect = 8e-07
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 6/109 (5%)
Query: 313 YSVVRHQSQPKPGQPEPQIIEYVTQQHKLFIAVATSHVYRITGHWLWDTYYKVTSDLDKG 372
YS VR Q P PG+ E ++EY QQ +L +A ++ + + ++ + G
Sbjct: 2 YSAVRKQFGP-PGKDEIPVLEYQMQQWRLIPLLAATYALSYFSRTFFLNFVELQIGIMMG 60
Query: 373 N----LEQLP-ELHAVSCCLKAVCSRDASIHIDDCRLACGGHGYMKSSS 416
E+L E+HA+S K + A I +CR ACGGHGY+ ++
Sbjct: 61 ENNDRQEELGREIHALSSASKPLAGFTARDAIQECREACGGHGYLAGAT 109
>SB_1643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 38.3 bits (85), Expect = 0.020
Identities = 36/138 (26%), Positives = 54/138 (39%), Gaps = 27/138 (19%)
Query: 126 TPEQAAEWVPKAQSMQMIGTYAQTELGHGTFLRGLETTATYDAKAEEFILNTPTLTSFKW 185
T Q EW+ + +G +A +E +G+ +TTA D + ++LN K
Sbjct: 130 TDAQKEEWIKPFLNGDRVGCFALSEPDNGSDAGAAKTTAVLDG--DHYVLN-----GTKA 182
Query: 186 WPGGLAHTANHCVVVAQLYTKGKCYGVHPFLVQIRDLETHMPMPGIKIGEIGSKLGYNTV 245
W + Y G+ FLV P PG+ +G KLG
Sbjct: 183 W-------------ITNGYESEAAVGISAFLVP-------KPTPGLTLGNKEDKLGIRAT 222
Query: 246 NNGFLGFNKVRIPRTNLL 263
+ +L F RIP+ NLL
Sbjct: 223 STCYLVFEDCRIPKENLL 240
>SB_24934| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 484
Score = 33.9 bits (74), Expect = 0.42
Identities = 47/200 (23%), Positives = 80/200 (40%), Gaps = 22/200 (11%)
Query: 113 HMGMFLPTLLHQTTPEQAAEWVPKAQSMQMIGTYAQTELGHGTFLRGLETTATYDAKAEE 172
H + + + EQ +++PK S + IG A +E G+ + ++ A D +
Sbjct: 128 HSNLCINQIARNGNKEQKRKYLPKLLSGEHIGALAMSEANAGSDVVSMKLRA--DKDGDH 185
Query: 173 FILNTPTLTSFKWWPGGLAHTANHCVVVAQLYTKGKC--YGVHPFLVQIRDLETHMPMPG 230
++LN + W G A+ +V A+ K + + FLV+ MPG
Sbjct: 186 YVLNGHKM----WITNG--PDADVLIVYAKTNPSSKKPEHAITTFLVE-------KGMPG 232
Query: 231 IKIGEIGSKLGYNTVNNGFLGFNKVRIPRTNLL---MKNAQVLKDGTYVKAKSEKLTYGT 287
KLG N L F+ RIP N++ K VL G ++ L G
Sbjct: 233 FSTSPKLDKLGMRGSNTCELVFDNCRIPAENVMGEVNKGVYVLMSGLDIERLI--LAAGP 290
Query: 288 MVLIRVLIVTDMAYELARAS 307
+ L++ + + Y AR +
Sbjct: 291 VGLMQACLDVTVPYLHARTA 310
>SB_15052| Best HMM Match : Pox_A32 (HMM E-Value=0.0023)
Length = 1901
Score = 33.5 bits (73), Expect = 0.56
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 20 QELVHFIDRGEEHTLERKELEDLVLSVKELKDETPEEYLSHKERYENAIRK 70
QE++ IDR E ER + D L +L+ E EE +S K+R + +K
Sbjct: 1840 QEILRSIDRKNEELSERNSVIDETLEENQLERENLEERMSLKDRVKAIFKK 1890
>SB_58137| Best HMM Match : DUF536 (HMM E-Value=2.8)
Length = 139
Score = 31.9 bits (69), Expect = 1.7
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 20 QELVHFIDRGEEHTLERKELEDLVLSVKELKDETPEEYLSHKERYENAIRK 70
QE + IDR E ER + D L +L+ E EE +S K+R + +K
Sbjct: 24 QERLRAIDRKNEELSERNSVIDETLEENQLERENLEERMSLKDRVKAIFKK 74
>SB_56849| Best HMM Match : E-MAP-115 (HMM E-Value=1.2)
Length = 155
Score = 31.9 bits (69), Expect = 1.7
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 20 QELVHFIDRGEEHTLERKELEDLVLSVKELKDETPEEYLSHKERYENAIRK 70
QE + IDR E ER + D L +L+ E EE +S K+R + +K
Sbjct: 72 QERLRAIDRKNEELSERNSVIDETLEENQLERENLEERMSLKDRVKAIFKK 122
>SB_31679| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 31.9 bits (69), Expect = 1.7
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 20 QELVHFIDRGEEHTLERKELEDLVLSVKELKDETPEEYLSHKERYENAIRK 70
QE + IDR E ER + D L +L+ E EE +S K+R + +K
Sbjct: 277 QERLRAIDRKNEELSERNSVIDETLEENQLERENLEERMSLKDRVKAIFKK 327
>SB_31513| Best HMM Match : Transgly_assoc (HMM E-Value=0.49)
Length = 340
Score = 31.9 bits (69), Expect = 1.7
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 20 QELVHFIDRGEEHTLERKELEDLVLSVKELKDETPEEYLSHKERYENAIRK 70
QE + IDR E ER + D L +L+ E EE +S K+R + +K
Sbjct: 194 QERLRAIDRKNEELSERNSVIDETLEENQLERENLEERMSLKDRVKAIFKK 244
>SB_15124| Best HMM Match : E-MAP-115 (HMM E-Value=1.6)
Length = 175
Score = 31.9 bits (69), Expect = 1.7
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 20 QELVHFIDRGEEHTLERKELEDLVLSVKELKDETPEEYLSHKERYENAIRK 70
QE + IDR E ER + D L +L+ E EE +S K+R + +K
Sbjct: 88 QERLRAIDRKNEELSERNSVIDETLEENQLERENLEERMSLKDRVKAIFKK 138
>SB_11449| Best HMM Match : RtcR (HMM E-Value=1.9)
Length = 335
Score = 31.9 bits (69), Expect = 1.7
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 20 QELVHFIDRGEEHTLERKELEDLVLSVKELKDETPEEYLSHKERYENAIRK 70
QE + IDR E ER + D L +L+ E EE +S K+R + +K
Sbjct: 277 QERLRAIDRKNEELSERNSVIDETLEENQLERENLEERMSLKDRVKAIFKK 327
>SB_1335| Best HMM Match : E-MAP-115 (HMM E-Value=1.6)
Length = 182
Score = 31.9 bits (69), Expect = 1.7
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 20 QELVHFIDRGEEHTLERKELEDLVLSVKELKDETPEEYLSHKERYENAIRK 70
QE + IDR E ER + D L +L+ E EE +S K+R + +K
Sbjct: 121 QERLRAIDRKNEELSERNSVIDETLEENQLERENLEEKMSLKDRVKAIFKK 171
>SB_58755| Best HMM Match : DUF536 (HMM E-Value=2.8)
Length = 267
Score = 31.9 bits (69), Expect = 1.7
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 20 QELVHFIDRGEEHTLERKELEDLVLSVKELKDETPEEYLSHKERYENAIRK 70
QE + IDR E ER + D L +L+ E EE +S K+R + +K
Sbjct: 14 QERLRAIDRKNEELSERNSVIDETLEENQLERENLEERMSLKDRVKAIFKK 64
>SB_56701| Best HMM Match : E-MAP-115 (HMM E-Value=0.63)
Length = 936
Score = 31.9 bits (69), Expect = 1.7
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 20 QELVHFIDRGEEHTLERKELEDLVLSVKELKDETPEEYLSHKERYENAIRK 70
QE + IDR E ER + D L +L+ E EE +S K+R + +K
Sbjct: 832 QERLRAIDRKNEELSERNSVIDETLEENQLERENLEERMSLKDRVKAIFKK 882
>SB_35145| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 174
Score = 31.9 bits (69), Expect = 1.7
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 20 QELVHFIDRGEEHTLERKELEDLVLSVKELKDETPEEYLSHKERYENAIRK 70
QE + IDR E ER + D L +L+ E EE +S K+R + +K
Sbjct: 14 QERLRAIDRKNEELSERNSVIDETLEENQLERENLEERMSLKDRVKAIFKK 64
>SB_34762| Best HMM Match : IncA (HMM E-Value=1.1)
Length = 288
Score = 31.9 bits (69), Expect = 1.7
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 20 QELVHFIDRGEEHTLERKELEDLVLSVKELKDETPEEYLSHKERYENAIRK 70
QE + IDR E ER + D L +L+ E EE +S K+R + +K
Sbjct: 14 QERLRAIDRKNEELSERNSVIDETLEENQLERENLEERMSLKDRVKAIFKK 64
>SB_31662| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 340
Score = 31.9 bits (69), Expect = 1.7
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 20 QELVHFIDRGEEHTLERKELEDLVLSVKELKDETPEEYLSHKERYENAIRK 70
QE + IDR E ER + D L +L+ E EE +S K+R + +K
Sbjct: 194 QERLRAIDRKNEELSERNSVIDETLEENQLERENLEERMSLKDRVKAIFKK 244
>SB_23275| Best HMM Match : IncA (HMM E-Value=0.43)
Length = 1176
Score = 31.9 bits (69), Expect = 1.7
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 20 QELVHFIDRGEEHTLERKELEDLVLSVKELKDETPEEYLSHKERYENAIRK 70
QE + IDR E ER + D L +L+ E EE +S K+R + +K
Sbjct: 275 QERLRAIDRKNEELSERNSVIDETLEENQLERENLEERMSLKDRVKAIFKK 325
>SB_19764| Best HMM Match : E-MAP-115 (HMM E-Value=0.62)
Length = 317
Score = 31.9 bits (69), Expect = 1.7
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 20 QELVHFIDRGEEHTLERKELEDLVLSVKELKDETPEEYLSHKERYENAIRK 70
QE + IDR E ER + D L +L+ E EE +S K+R + +K
Sbjct: 96 QERLRAIDRKNEELSERNSVIDETLEENQLERENLEERMSLKDRVKAIFKK 146
>SB_19114| Best HMM Match : E-MAP-115 (HMM E-Value=0.44)
Length = 532
Score = 31.9 bits (69), Expect = 1.7
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 20 QELVHFIDRGEEHTLERKELEDLVLSVKELKDETPEEYLSHKERYENAIRK 70
QE + IDR E ER + D L +L+ E EE +S K+R + +K
Sbjct: 386 QERLRAIDRKNEELSERNSVIDETLEENQLERENLEERMSLKDRVKAIFKK 436
>SB_17094| Best HMM Match : NapE (HMM E-Value=7.7)
Length = 219
Score = 31.5 bits (68), Expect = 2.2
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 606 AVGLVDGFDIRDEILNSTLGAYDGRVYERLMEEALKSPLNAEPVNTSF 653
AVGL GF I ++L S G G ++ + L+ PLNA N F
Sbjct: 161 AVGLFWGFHILYQVLRSQKGVVGGNLFLNEIYFTLRQPLNALENNRGF 208
>SB_11450| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 31.5 bits (68), Expect = 2.2
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 383 VSCC-LKAVCSRDASIHIDDCRLACGGHGYMKSSSFPFIQAIVTASVTYEGEYTVMM 438
+ CC +KA+ + R CGG GY+ + F A +S+T EG+ +V+M
Sbjct: 12 IMCCVIKALTGWHIAKAASVGRERCGGQGYLSCNRFGSAIAGSHSSITAEGDNSVLM 68
>SB_34740| Best HMM Match : DEAD (HMM E-Value=0.00031)
Length = 233
Score = 31.5 bits (68), Expect = 2.2
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Query: 486 GFQAIAAGLTKAAYDEIEKHEKTGLDYEDSWNQASVQLVRASEAHCRVIICEKSWLEAQR 545
GF A A DE + + LD +D N + L+RA+ RV++C +S ++
Sbjct: 42 GFVDAAEPEEPTARDEDKDRDPIALD-DDIQNSPYLSLIRAASLFIRVLVCVRSGTDSYL 100
Query: 546 LTKSLSPALSKVLLELVELYI 566
L K ++ L LY+
Sbjct: 101 LRARTGMLKPKQVVCLESLYL 121
>SB_19986| Best HMM Match : bZIP_2 (HMM E-Value=5.7e-17)
Length = 278
Score = 31.1 bits (67), Expect = 3.0
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 44 LSVKELKDETPEEYLSHKERYENAIRKASLLFKILQKYFETHNLLDIFSPTNK 96
+S + D+ EEY +ER A+RK+ FK QK+ ET + ++ + N+
Sbjct: 186 ISKRNSMDKHSEEYRQKRERNNVAVRKSR--FKSKQKFIETQSRVEELTEENE 236
>SB_5982| Best HMM Match : PAP2 (HMM E-Value=8.3e-19)
Length = 320
Score = 31.1 bits (67), Expect = 3.0
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 416 SFPFIQAIVTASVTYEGEYTVMMLQTARYLMKT--LKQALSGKAITSTVAYLLDFDKNSN 473
SFP + +V Y + + LQ A L +T L+ AL AI +A + K+ +
Sbjct: 186 SFPSVNTLVAM---YCMVFVALSLQAAECLSRTKLLRTALQVAAILGALAVGMSRVKDYS 242
Query: 474 RNWQNTPEGIVIGFQA 489
+W + G+++G A
Sbjct: 243 HHWSDVAAGVILGSAA 258
>SB_16898| Best HMM Match : IncA (HMM E-Value=0.36)
Length = 466
Score = 30.7 bits (66), Expect = 3.9
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 20 QELVHFIDRGEEHTLERKELEDLVLSVKELKDETPEEYLSHKERYENAIRK 70
QE + IDR E ER + D L +L+ E EE +S K+R + +K
Sbjct: 121 QERLRAIDRKNEELSERNFVIDETLEENQLERENLEERMSLKDRVKAIFKK 171
>SB_4429| Best HMM Match : DUF1279 (HMM E-Value=2.8)
Length = 207
Score = 30.7 bits (66), Expect = 3.9
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 20 QELVHFIDRGEEHTLERKELEDLVLSVKELKDETPEEYLSHKERYENAIRK 70
QE + IDR E ER + D L +L+ E EE +S K+R + +K
Sbjct: 14 QERLRAIDRKNEELSERNFVIDETLEENQLERENLEERMSLKDRVKAIFKK 64
>SB_52788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 500
Score = 29.9 bits (64), Expect = 6.9
Identities = 32/136 (23%), Positives = 58/136 (42%), Gaps = 14/136 (10%)
Query: 128 EQAAEWVPKAQSMQMIGTYAQTELGHGTFLRGLETTATYDAKAEEFILNTPTLTSFKWWP 187
EQ +++ + ++ Y TE G+ + G++T A + K +E+++N + W
Sbjct: 219 EQKKKYLGRMIKEPIMAAYCVTEPTAGSDVAGIKTRA--EKKGDEYVINGQKM----WIT 272
Query: 188 GGLAHTANHCVVVAQLYTKGKCYGVHPFLVQIRDLETHMPMPGIKIGEIGSKLGYNTVNN 247
G AN V+A+ T F I D +T PG+ G +G +
Sbjct: 273 NG--GVANWYFVLAR--TDSSASAGKGFTGFIVDADT----PGVTPGRKEQNMGQRASDT 324
Query: 248 GFLGFNKVRIPRTNLL 263
+ F V +P+ N+L
Sbjct: 325 RGITFEDVVVPKENVL 340
>SB_38634| Best HMM Match : DUF164 (HMM E-Value=0.6)
Length = 493
Score = 29.9 bits (64), Expect = 6.9
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 7 DLVKE-RQKCTFDVQELVHFIDRGEEHTLERKELEDLVLSV-KELKDETP--EEYLSHKE 62
D VK R+KC+ ++L E+H R L DLV + K+L+DE ++ +
Sbjct: 99 DQVKALREKCSKLREKLAKTEQEKEDHFRTRNYLADLVNDLRKDLEDEVDRNKDLEAQVR 158
Query: 63 RYENAIRKASLLFKILQKYF 82
+ + ++ +L K +QKYF
Sbjct: 159 KVRSRVKVNTLGSKEMQKYF 178
>SB_33442| Best HMM Match : AAA (HMM E-Value=0)
Length = 369
Score = 29.9 bits (64), Expect = 6.9
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 8/113 (7%)
Query: 537 EKSWLEAQRLTKSLSPALSKVLLELVELYIIYWALEKKGDFL-VYTKMQKDDVMQLQQR- 594
+KS ++S S V E+ +LYI Y LEK+ +FL V + KD+ L++
Sbjct: 12 DKSTSSRPTTAGTISSLCSPVDPEMDDLYITYKKLEKQLEFLEVQEEYIKDEQKNLKKEL 71
Query: 595 ---YEELLAVIR-PNAVG-LVDGFDIRDEILNSTLGA-YDGRVYERLMEEALK 641
EE+ + P +G ++ D I+ ST G+ Y R+ + +E LK
Sbjct: 72 LHAQEEVKRIQSVPLVIGQFLEAVDQNTGIVASTTGSNYYVRILSTIDKELLK 124
>SB_33561| Best HMM Match : Transgly_assoc (HMM E-Value=0.49)
Length = 340
Score = 29.9 bits (64), Expect = 6.9
Identities = 17/51 (33%), Positives = 25/51 (49%)
Query: 20 QELVHFIDRGEEHTLERKELEDLVLSVKELKDETPEEYLSHKERYENAIRK 70
QE + IDR E ER + D L +L+ E EE + K+R + +K
Sbjct: 194 QERLRAIDRKNEELSERNSVIDETLEENQLERENLEERMPLKDRVKAIFKK 244
>SB_23665| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 222
Score = 29.9 bits (64), Expect = 6.9
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 7 DLVKE-RQKCTFDVQELVHFIDRGEEHTLERKELEDLVLSV-KELKDETP--EEYLSHKE 62
D VK R+KC+ ++L E+H R L DLV + K+L+DE ++ +
Sbjct: 99 DQVKALREKCSKLREKLAKTEQEKEDHFRTRNYLADLVNDLRKDLEDEVDRNKDLEAQVR 158
Query: 63 RYENAIRKASLLFKILQKYF 82
+ + ++ +L K +QKYF
Sbjct: 159 KVRSRVKVNTLGSKEMQKYF 178
>SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1507
Score = 29.9 bits (64), Expect = 6.9
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 11/86 (12%)
Query: 575 GDFLVYTKMQKDDVMQLQQR---YEELLAVIRPNAVGLVDGFDIRDEILNSTLGAYDGRV 631
GD V K ++V QL+Q+ YE + ++ GF + L S + +GR+
Sbjct: 388 GDGSVARKESLENVAQLKQQLQAYEHEIRNLKAELKNQKHGFTECKQSLESAITVLEGRI 447
Query: 632 YERLMEEALKSPLNAEPVNTSFHQYL 657
ER EE +++ L+ E HQYL
Sbjct: 448 KER--EEQVRNELHEE------HQYL 465
>SB_44021| Best HMM Match : DUF622 (HMM E-Value=0.34)
Length = 572
Score = 29.5 bits (63), Expect = 9.1
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 19 VQELVHFIDRGEEHTLERKELEDLVLSVKELKDETPEEYLSHKERYENAI 68
VQ + ID + L R+ LE KEL+++ + ++KE+Y+ I
Sbjct: 91 VQAVQEHIDSSAQVKLLREALETAEKEKKELQEKLSNSFTAYKEKYQQYI 140
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 29.5 bits (63), Expect = 9.1
Identities = 14/61 (22%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 30 EEHTLERKELEDLVLSVKELKDETPEEYLSHKERYENAIRKASLLFKILQKYFET-HNLL 88
++ E L++ V + K+ ++ + ++ YE+ +RK +L+ LQ+ +T H L+
Sbjct: 4557 KQKEFELSSLKEEVDTTKQFAEQAANQMNEQQQEYEDQLRKMEMLYGELQRSEDTIHQLV 4616
Query: 89 D 89
+
Sbjct: 4617 E 4617
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.134 0.396
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,729,003
Number of Sequences: 59808
Number of extensions: 898922
Number of successful extensions: 2244
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 2189
Number of HSP's gapped (non-prelim): 54
length of query: 665
length of database: 16,821,457
effective HSP length: 87
effective length of query: 578
effective length of database: 11,618,161
effective search space: 6715297058
effective search space used: 6715297058
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 63 (29.5 bits)
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