Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002574-TA|BGIBMGA002574-PA|IPR012258|Acyl-CoA oxidase,
IPR009100|Acyl-CoA dehydrogenase/oxidase, middle and N-terminal,
IPR009075|Acyl-CoA dehydrogenase/oxidase C-terminal,
IPR006091|Acyl-CoA dehydrogenase/oxidase, central region,
IPR002655|Acyl-CoA oxidase, C-terminal
(667 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0023 + 227014-227166,227893-228001,228096-228157,228284-22... 432 e-121
11_06_0340 - 22500411-22500566,22500660-22500783,22500914-225010... 227 3e-59
06_02_0320 - 14347195-14347443,14347573-14347674,14347747-143478... 203 3e-52
01_01_0413 - 3107668-3107796,3107879-3107971,3108082-3108253,310... 38 0.034
10_08_0568 + 18837195-18837203,18837694-18837741,18837853-188379... 32 1.7
03_05_1065 + 30061588-30061883,30061995-30062056,30062196-300622... 32 1.7
08_02_0903 + 22438406-22438614,22439640-22440366,22440494-224406... 31 2.2
02_05_0877 + 32403363-32404662,32406545-32406630,32406709-324070... 30 5.2
02_01_0321 - 2162015-2162134,2162763-2162846,2162931-2163011,216... 30 5.2
09_04_0195 - 15509412-15509580,15510136-15510467,15510494-155109... 30 6.8
05_01_0321 + 2535201-2535260,2535366-2535700,2535705-2535849,253... 29 9.0
>06_01_0023 +
227014-227166,227893-228001,228096-228157,228284-228493,
228609-228696,228774-228936,229037-229235,229456-229653,
229887-230018,230182-230302,230453-230563,230710-230779,
230880-231063,231137-231346
Length = 669
Score = 432 bits (1065), Expect = e-121
Identities = 266/673 (39%), Positives = 368/673 (54%), Gaps = 35/673 (5%)
Query: 10 LVRERQKCSFDVQELVHFIDGGEEHTLE--RREVENLVLDIKELKDVVPEEFLSHKERYE 67
L ER FDV+ + G H ++ R + D KD L KE ++
Sbjct: 12 LAGERATAQFDVEHM-KVAWAGSRHAVDVADRMARLVASDPVFRKD--NRTMLPRKELFK 68
Query: 68 NSIRKACILYEFFRKYSETNNTLDAFSPTNKYRVQMGVFKDISPFMLHMGMFVPTIMNQS 127
+++RKA +++ E T + + Y Q G + D LH GMFVP I Q
Sbjct: 69 DTLRKAA---HAWKRIVELRLTEEEANLLRLYVDQPG-YVD-----LHWGMFVPAIKGQG 119
Query: 128 APDQAAEWLPKALNLEIIGTYAQTELGHGTFLRGLETTATYDPKTEEFVLNSPTLTAYKW 187
+Q +WLP A +IIG YAQTELGHG+ ++GLETTAT+DPKT+EFV++SPTLT+ KW
Sbjct: 120 TEEQQKKWLPLAYRFQIIGCYAQTELGHGSNVQGLETTATFDPKTDEFVIHSPTLTSSKW 179
Query: 188 WPGGLAHTANHCIVVAQLYTNGKCYGVHPFFVQIRDSETHMPLTGVKVGEIGPKLG---F 244
WPGGL + H +V A+L T GK YG+H F VQ+R E H PL GV +G+IG K G +
Sbjct: 180 WPGGLGKASTHAVVYARLITEGKDYGIHGFIVQLRSLEDHSPLPGVTLGDIGGKFGSGAY 239
Query: 245 NTANNGFLGFNNFRIPRMNMLMKNAQVLKDGTYVKAKSDK-LTYGTMVFVRVLIVTDMAY 303
N+ +NG L F++ RIPR MLM+ +QV K+G YV + K L YGTMVFVR IV D +
Sbjct: 240 NSMDNGVLRFDHVRIPRDQMLMRLSQVTKEGKYVHSDVPKQLLYGTMVFVRQTIVADASK 299
Query: 304 ELSRASTIAVRYAAVRHQSQPKPGEPEPAIIEYVTQQHKLFIAIATSHAYRVTGNWLWNT 363
LSRA+ IAVRY+A+R Q P+ G PE ++ Y TQQ +LF +A+++A+R G WL
Sbjct: 300 ALSRATCIAVRYSAIRKQFGPQTGGPETQVLNYKTQQSRLFPLLASAYAFRFVGEWLKWL 359
Query: 364 YSKVTSDMGKGNLDQLPELHALACCLKAVCSRDATLRIEECRLACGGHGYMASSGLPIIQ 423
Y+ VT + + L E HA LKAV + IEECR CGGHGY+ SSGLP +
Sbjct: 360 YTDVTHKLEAKDFSTLQEAHACTAGLKAVTTSATADGIEECRKLCGGHGYLNSSGLPELF 419
Query: 424 NIAAATITYEGEYTVLMLQTARYLVKAWKQASVGKVMTPTVAYLVDF--------SKNSN 475
I TYEG+ VL+LQ AR+L+K Q + GK T AY+ + N+
Sbjct: 420 AIYVPACTYEGDNVVLLLQVARFLMKTVSQLASGKQPVGTTAYMGNIQYLMQCKCGVNTA 479
Query: 476 HIWENTPEGIIRGFHAVGAGKTQAAFEAVQAHEKTGLDFEDAWNRASVQLVNASEAHCRA 535
W N P I F A + A Q K E+ + S L+ + AH +
Sbjct: 480 EDWLN-PAAIREVFE---ARALRMAVNCAQNINKAPSQ-EEGFYELSPDLLEVAVAHIQL 534
Query: 536 ILCEMSWAEMQRLSQTL-SPNLRKVVLELIEMYIVFWALEKRGELLMYTKIQKDDIAVLQ 594
I+ +++L Q + +++ + L +Y ++ + G+ L I A+
Sbjct: 535 IIVTKF---IEKLEQDIPGEGVKEQLCILCNVYALYLVHKHLGDFLSTGSITARQGALAN 591
Query: 595 KRYEELLAAVRPNAVGLVDAFDIRDEILNSTLGAFDGRVYERLMEEALKSPLNAEPVNRS 654
++ +L A VRPNAV LVDAF+ D L S LG +DG VY L EEA K PLN V
Sbjct: 592 EQLGKLYAQVRPNAVALVDAFNYTDHYLGSVLGRYDGNVYPALYEEAWKDPLNDTDVPDG 651
Query: 655 FHQYLKPLIKAKL 667
+ ++L+PL+K +L
Sbjct: 652 YQEHLRPLLKQQL 664
>11_06_0340 -
22500411-22500566,22500660-22500783,22500914-22501080,
22501157-22501336,22501544-22502427,22502728-22502843,
22503745-22504217
Length = 699
Score = 227 bits (554), Expect = 3e-59
Identities = 162/511 (31%), Positives = 252/511 (49%), Gaps = 32/511 (6%)
Query: 141 NLEIIGTYAQTELGHGTFLRGLETTATYDPKTEEFVLNSPTLTAYKWWPGGLAHTANHCI 200
NL+ G +A TEL HG+ ++ L+TTAT+DP T+EF++N+P A KWW G A
Sbjct: 182 NLDYPGCFAMTELHHGSNVQALQTTATFDPVTDEFIINTPNDGAIKWWIGNAALHGKFAT 241
Query: 201 VVAQLY--TNGK-----CYGVHPFFVQIRDSETHMPLTGVKVGEIGPKLGFNTANNGFLG 253
V A+L GK G+H F V IRD +T+ L G+++ + G K+G N +NG L
Sbjct: 242 VFARLILPLQGKGGDPADMGIHAFIVPIRDLDTNAVLPGIEINDCGHKIGLNGVDNGALR 301
Query: 254 FNNFRIPRMNMLMKNAQVLKDGTYVKA-----KSDKLTYGTMVFVRVLIVTDMAYELSRA 308
F + RIPR N+L + V +DG Y + K T G +V RV I L +
Sbjct: 302 FRSVRIPRDNLLNRFGDVSRDGKYTSSLPTINKRFAATLGELVGGRVGIAYSSVGILKVS 361
Query: 309 STIAVRYAAVRHQSQPKPGEPEPAIIEYVTQQHKLFIAIATSHAYRVTGNWLWNTYSKVT 368
TIAVRYA +R Q P P +PE ++++Y + QHKL +A+S+A+ +L + YS++
Sbjct: 362 VTIAVRYALLRQQFGP-PKKPEISVLDYQSHQHKLMPMLASSYAFHFATRYLVDKYSEMK 420
Query: 369 SDMGKGNLDQLPELHALACCLKAVCSRDATLRIEECRLACGGHGYMASSGLPIIQNIAAA 428
+ D + ++H L+ LKA + I CR +CGGHGY A + ++N
Sbjct: 421 K---TNDEDVMADVHVLSSGLKAYITSYTAKSISVCRESCGGHGYAAVNRFGALRNDHDI 477
Query: 429 TITYEGEYTVLMLQTARYLVKAWKQASVGKVMTPTVAYLVD----FSKNSNHI---WE-- 479
T+EG+ TVL+ Q A L+K +++ G ++ T YL D + N + WE
Sbjct: 478 FQTFEGDNTVLLQQVAGDLLKQYQEKFKGGTLSATWNYLRDSMGTYLSQPNPVTSRWEGE 537
Query: 480 ---NTPEGIIRGFHAVGAGKTQAAFEAVQAHEKTGLDFEDAWNRASVQLVNASEAHCRAI 536
P + F + + +Q H KT L AWNR L+ +E+H ++
Sbjct: 538 DHLRDPNFQLDAFRYRTSRLLHSVAARLQKHSKT-LGGFGAWNRCLNHLLTLAESHIESV 596
Query: 537 LCEMSWAEMQRLSQTLSPNLRKVVLELIEMYIVFWALEKRGELLMYTKIQKDDIAVLQKR 596
+ ++R + L K+V +L + + W + G + + + K
Sbjct: 597 ILAKFIEAVKRCPDEKTRELLKLVCDLYALDRI-W--KDIGTYRNVDYVAPNKAKAIHKL 653
Query: 597 YEELLAAVRPNAVGLVDAFDIRDEILNSTLG 627
+ L VR A LVDAFD+ D I+ + +G
Sbjct: 654 ADYLSYQVRLVAQELVDAFDLPDLIIRAPIG 684
>06_02_0320 -
14347195-14347443,14347573-14347674,14347747-14347851,
14347938-14348084,14348171-14348290,14348743-14348878,
14349198-14349328,14350854-14350928,14351040-14351139,
14351213-14351385,14351474-14351581,14351674-14351791,
14353477-14353970
Length = 685
Score = 203 bits (496), Expect = 3e-52
Identities = 116/319 (36%), Positives = 166/319 (52%), Gaps = 13/319 (4%)
Query: 134 EWLPKALNLEIIGTYAQTELGHGTFLRGLETTATYDPKTEEFVLNSPTLTAYKWWPGGLA 193
+WL N I G ++ TELGHG+ +RG+ET ATYD KT EFV+N+P +A K+W GG A
Sbjct: 180 KWLSDTENYVIKGCFSMTELGHGSNVRGIETVATYDIKTREFVINTPCESAQKYWIGGAA 239
Query: 194 HTANHCIVVAQLYTNGKCYGVHPFFVQIRDSETHMPLTGVKVGEIGPKLGFNTANNGFLG 253
+ A H IV AQL+ NG+ GVH F QIRD ++ + +++ + G K+G N +NG +
Sbjct: 240 NHATHTIVFAQLHINGRNEGVHAFVAQIRDEHENV-MPNIQIADCGHKIGLNGVDNGRIW 298
Query: 254 FNNFRIPRMNMLMKNAQVLKDGTYVKAKSD-----KLTYGTMVFVRVLIVTDMAYELSRA 308
FNN R+PR N+L A VL DG YV D + RV I + Y
Sbjct: 299 FNNIRVPRENLLNLVADVLPDGQYVSTIDDPDQRFAAFLSPLTLGRVNIAVNAVYISKVG 358
Query: 309 STIAVRYAAVRHQSQPKPGEPEPAIIEYVTQQHKLFIAIATSHAYRVTGNWLWNTYSKVT 368
IAVRYA R P PE +++Y + Q +L +A + GN++ Y K T
Sbjct: 359 VAIAVRYALSRRAFSVTPDGPEMLLLDYPSHQRRLLPLLAKACLMSSAGNFMKRMYVKRT 418
Query: 369 SDMGKGNLDQLPELHALACCLKAVCSRDATLRIEECRLACGGHGYMASSGLPIIQNIAAA 428
++ K +H + LKA + ++ECR ACGG G + + I +
Sbjct: 419 PELNK-------SIHIYSSALKATLTWQNMTTLQECREACGGQGLKTENRIGIFKAEFDV 471
Query: 429 TITYEGEYTVLMLQTARYL 447
T+EG+ VLM Q ++ L
Sbjct: 472 QSTFEGDNNVLMQQVSKAL 490
>01_01_0413 -
3107668-3107796,3107879-3107971,3108082-3108253,
3108341-3108417,3108514-3108673,3108766-3108875,
3109384-3109443,3109545-3109618,3109748-3109871,
3110795-3110872,3111169-3111275,3112572-3112673,
3112800-3112815
Length = 433
Score = 37.5 bits (83), Expect = 0.034
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 18/153 (11%)
Query: 113 MLHMGMFVPTIMNQSAPDQAAEWLPKALNLEIIGTYAQTELGHGTFLRGLETTATYDPKT 172
++H + + TI + Q ++LP L +G +A TE HG+ L TTAT P
Sbjct: 132 LVHSSLAMVTIALCGSEVQKQKYLPSLAQLTAVGCWALTEPNHGSDASSLITTATKVP-- 189
Query: 173 EEFVLNSPTLTAYKWWPGGLAHTANHCIVVAQLYTNGKCYGVHPFFVQIRDSETHMPLTG 232
+ K W G + A+ +V+A+ N ++ F V+ G
Sbjct: 190 -----GGWHIDGQKRWIGN-STFADVLVVLAR---NANTKQLNGFIVR-------KGAPG 233
Query: 233 VKVGEIGPKLGFNTANNGFLGFNNFRIPRMNML 265
+K +I K+G NG + FN +P + L
Sbjct: 234 LKATKIENKIGLRMVQNGDIVFNKVFVPEEDRL 266
>10_08_0568 +
18837195-18837203,18837694-18837741,18837853-18837912,
18837986-18838155,18838297-18838369,18838529-18838594,
18838685-18838768,18838950-18839027,18839122-18839205,
18839562-18839641,18839791-18839848,18839933-18840235,
18840361-18840531,18840972-18841204,18841303-18841705,
18841961-18842212,18842293-18842790,18843073-18843170,
18843314-18843413,18843653-18843798,18843912-18844068
Length = 1056
Score = 31.9 bits (69), Expect = 1.7
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Query: 332 AIIEYVTQQHKLFIAIATSHAYRVTGNWLWNTYSKVTSDMGKGNLDQLPELHALACC 388
A+I Y +Q K+ + I H YR N LWN + +G DQ A+A C
Sbjct: 717 ALISYTSQSDKINLDIKRVHGYRQWCNKLWNAVRFAMNKLG----DQYTPPAAIALC 769
>03_05_1065 + 30061588-30061883,30061995-30062056,30062196-30062276,
30062391-30062464,30062547-30062629,30063044-30063147,
30063526-30063665,30063736-30063783,30063939-30063991,
30064178-30064262,30064346-30064412,30064496-30064606,
30065262-30065283,30066244-30071110,30071186-30071374,
30071463-30071577,30072329-30073388,30074247-30074694,
30074966-30075019,30075105-30076898,30076989-30077949,
30078271-30078384,30078459-30078613,30078934-30079026,
30079341-30079613,30093423-30093975,30094465-30094540,
30094619-30094718
Length = 4025
Score = 31.9 bits (69), Expect = 1.7
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
Query: 517 AWNRASVQLVNASEAHCRAILCEMSWAEMQRLSQTLSPNLRKVVLELIEMYIVFWALEKR 576
A R +V L AH A + + MQR S L+ LRK+VLE+I+ V W +
Sbjct: 3345 AVGRIAVMLEEYCNAHETARAARTAVSLMQRQSNDLTEALRKIVLEIIQ---VEWLHDLS 3401
Query: 577 GELLMYTKIQKDDIAVLQKRYEELLAAVRPNAVGLVDA 614
+K+ +I K LL R N + + +
Sbjct: 3402 SPHAQKSKVLSQNILSDDKFISVLLNISRGNLLDKIQS 3439
>08_02_0903 +
22438406-22438614,22439640-22440366,22440494-22440679,
22441310-22441770,22441869-22442027,22442098-22442449,
22442563-22442842,22443330-22443661
Length = 901
Score = 31.5 bits (68), Expect = 2.2
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 205 LYTNGKCYGVHPFFVQIRDSETHM 228
L+T C G+HPF VQIR E H+
Sbjct: 585 LHTVIMCEGIHPFEVQIRTKEMHL 608
>02_05_0877 +
32403363-32404662,32406545-32406630,32406709-32407077,
32407174-32407257,32407362-32407784,32408368-32408434,
32409238-32409430,32409577-32409680,32409787-32409990,
32410174-32410427,32410511-32410735,32410812-32411033,
32411109-32411162,32411337-32411402,32411496-32411633,
32411979-32412032,32412334-32412393,32412975-32413340,
32413415-32413582
Length = 1478
Score = 30.3 bits (65), Expect = 5.2
Identities = 18/45 (40%), Positives = 23/45 (51%)
Query: 574 EKRGELLMYTKIQKDDIAVLQKRYEELLAAVRPNAVGLVDAFDIR 618
E GE+L D A L+ RYE+L+A V N +DAF R
Sbjct: 920 EVEGEMLYLQARLLDTAAFLKHRYEDLIAKVVQNLSRELDAFSRR 964
>02_01_0321 -
2162015-2162134,2162763-2162846,2162931-2163011,
2163690-2163867,2163946-2164089,2164194-2164240,
2164520-2164576,2165286-2165408,2165496-2165618,
2165959-2166072,2166169-2166176,2166272-2166458,
2174597-2174763,2174924-2175008,2176632-2176820,
2177727-2177918,2178434-2178634
Length = 699
Score = 30.3 bits (65), Expect = 5.2
Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 7/96 (7%)
Query: 264 MLMKNAQVLKDGTYVKAKSDKLTYGTMVFVRVLIVTDMAYELSRASTIAVRYAAVRHQSQ 323
M ++N Q +DG+++ TYG V+ LI YE S + A + + +
Sbjct: 534 MFIENTQG-EDGSWLGTWGVCFTYGAFFSVKGLIAAGRTYENSSSIRKACDFIMSKQLNT 592
Query: 324 PKPGEPEPAIIEYVTQQHKLFIAIATSHAYRVTGNW 359
GE +V+ + K+++ I HA+ V W
Sbjct: 593 GGWGE------SHVSNETKVYVNIKGDHAHAVNTAW 622
>09_04_0195 -
15509412-15509580,15510136-15510467,15510494-15510900,
15511467-15511581,15512711-15514044,15514558-15514819
Length = 872
Score = 29.9 bits (64), Expect = 6.8
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 238 IGPKLGFNTANNGFLGFNNFRIPRMNMLMKNAQVLKDGTYVKAKS 282
IGP + TA G+ G +NF+I + ++ VLK TY KS
Sbjct: 695 IGPI--YKTAGFGYFGQSNFKISFLLDCLRMQNVLKCSTYANTKS 737
>05_01_0321 +
2535201-2535260,2535366-2535700,2535705-2535849,
2535946-2536140,2536243-2536530,2536849-2537035,
2537260-2537306,2537704-2537796
Length = 449
Score = 29.5 bits (63), Expect = 9.0
Identities = 14/83 (16%), Positives = 40/83 (48%)
Query: 7 NPDLVRERQKCSFDVQELVHFIDGGEEHTLERREVENLVLDIKELKDVVPEEFLSHKERY 66
NP ++ ++C+ + + + + G + E LD + DVV + ++ +++
Sbjct: 264 NPMMIHATERCAAGIMQAIGHFNLGPNVSPRDLEFPYPKLDAIKPADVVVKFYVLYEKWR 323
Query: 67 ENSIRKACILYEFFRKYSETNNT 89
+ ++KA + ++ ++ + N T
Sbjct: 324 QGEVQKAPFIIQYLKRITHPNGT 346
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.320 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,186,147
Number of Sequences: 37544
Number of extensions: 808704
Number of successful extensions: 1751
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1726
Number of HSP's gapped (non-prelim): 14
length of query: 667
length of database: 14,793,348
effective HSP length: 87
effective length of query: 580
effective length of database: 11,527,020
effective search space: 6685671600
effective search space used: 6685671600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 63 (29.5 bits)
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