GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002573-TA|BGIBMGA002573-PA|IPR006091|Acyl-CoA
dehydrogenase/oxidase, central region, IPR002655|Acyl-CoA oxidase,
C-terminal, IPR012258|Acyl-CoA oxidase, IPR009100|Acyl-CoA
dehydrogenase/oxidase, middle and N-terminal, IPR009075|Acyl-CoA
dehydrogenase/oxidase C-terminal
         (686 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    28   0.29 
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    28   0.29 

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 27.9 bits (59), Expect = 0.29
 Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 10/101 (9%)

Query: 560 FHEEFVKVSSSFSPALRRVMKLLVELYTLYWALDKLQDLLKYTSISKTDTEQLQERYEDT 619
           + EE V   SSF    R  M L + L  LY   +KLQ   +  +     T+ L+ RYED 
Sbjct: 68  YTEESVSALSSFYD--RTKMSLQLVLAALY-PPNKLQQWNEDLNWQPIATKYLR-RYED- 122

Query: 620 LNALRPDAVGLVDAFDI-MDEILQSTLGAYDGRVYERLMEE 659
            N   P+   L   F I +D +L+S  G Y+   Y++L ++
Sbjct: 123 -NIFLPEDCLL---FTIELDRVLESPRGKYEFSKYDKLKKK 159


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 27.9 bits (59), Expect = 0.29
 Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 10/101 (9%)

Query: 560 FHEEFVKVSSSFSPALRRVMKLLVELYTLYWALDKLQDLLKYTSISKTDTEQLQERYEDT 619
           + EE V   SSF    R  M L + L  LY   +KLQ   +  +     T+ L+ RYED 
Sbjct: 83  YTEESVSALSSFYD--RTKMSLQLVLAALY-PPNKLQQWNEDLNWQPIATKYLR-RYED- 137

Query: 620 LNALRPDAVGLVDAFDI-MDEILQSTLGAYDGRVYERLMEE 659
            N   P+   L   F I +D +L+S  G Y+   Y++L ++
Sbjct: 138 -NIFLPEDCLL---FTIELDRVLESPRGKYEFSKYDKLKKK 174


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.134    0.402 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,898
Number of Sequences: 429
Number of extensions: 7729
Number of successful extensions: 17
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 17
Number of HSP's gapped (non-prelim): 2
length of query: 686
length of database: 140,377
effective HSP length: 62
effective length of query: 624
effective length of database: 113,779
effective search space: 70998096
effective search space used: 70998096
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 47 (23.0 bits)