Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002572-TA|BGIBMGA002572-PA|IPR000196|Ribosomal protein
L19e
(235 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT024264-1|ABC86326.1| 208|Drosophila melanogaster IP15818p pro... 270 1e-72
AY061217-1|AAL28765.2| 221|Drosophila melanogaster LD16326p pro... 270 1e-72
AE013599-4000|AAS64772.1| 203|Drosophila melanogaster CG2746-PB... 270 1e-72
AE013599-3999|AAF47305.1| 203|Drosophila melanogaster CG2746-PA... 270 1e-72
X74776-1|CAA52784.1| 203|Drosophila melanogaster ribosomal prot... 266 2e-71
L23195-1|AAA60323.1| 4639|Drosophila melanogaster cytoplasmic dy... 29 7.3
BT025964-1|ABG02208.1| 1312|Drosophila melanogaster IP16365p pro... 29 7.3
AE014296-904|AAN11615.1| 3388|Drosophila melanogaster CG7507-PB,... 29 7.3
AE014296-903|AAF47942.3| 4639|Drosophila melanogaster CG7507-PA,... 29 7.3
X97196-1|CAA65830.1| 3429|Drosophila melanogaster hypothetical p... 28 9.7
AE014298-856|AAF46135.2| 3419|Drosophila melanogaster CG3585-PA ... 28 9.7
>BT024264-1|ABC86326.1| 208|Drosophila melanogaster IP15818p
protein.
Length = 208
Score = 270 bits (661), Expect = 1e-72
Identities = 132/198 (66%), Positives = 143/198 (72%)
Query: 36 LRSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 95
+ SLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 6 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 65
Query: 96 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 155
RVRKNTEARRKGRHCGFGKR+GTANARMP K LW +KKIDRHLY
Sbjct: 66 YRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLY 125
Query: 156 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXXX 215
H LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQ
Sbjct: 126 HDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERIATK 185
Query: 216 XXXLLQTFAREDEAALTA 233
L+ A+EDE A A
Sbjct: 186 KQELIALHAKEDEIAAKA 203
>AY061217-1|AAL28765.2| 221|Drosophila melanogaster LD16326p
protein.
Length = 221
Score = 270 bits (661), Expect = 1e-72
Identities = 132/198 (66%), Positives = 143/198 (72%)
Query: 36 LRSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 95
+ SLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 19 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 78
Query: 96 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 155
RVRKNTEARRKGRHCGFGKR+GTANARMP K LW +KKIDRHLY
Sbjct: 79 YRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLY 138
Query: 156 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXXX 215
H LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQ
Sbjct: 139 HDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERIATK 198
Query: 216 XXXLLQTFAREDEAALTA 233
L+ A+EDE A A
Sbjct: 199 KQELIALHAKEDEIAAKA 216
>AE013599-4000|AAS64772.1| 203|Drosophila melanogaster CG2746-PB,
isoform B protein.
Length = 203
Score = 270 bits (661), Expect = 1e-72
Identities = 132/198 (66%), Positives = 143/198 (72%)
Query: 36 LRSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 95
+ SLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60
Query: 96 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 155
RVRKNTEARRKGRHCGFGKR+GTANARMP K LW +KKIDRHLY
Sbjct: 61 YRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLY 120
Query: 156 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXXX 215
H LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQ
Sbjct: 121 HDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERIATK 180
Query: 216 XXXLLQTFAREDEAALTA 233
L+ A+EDE A A
Sbjct: 181 KQELIALHAKEDEIAAKA 198
>AE013599-3999|AAF47305.1| 203|Drosophila melanogaster CG2746-PA,
isoform A protein.
Length = 203
Score = 270 bits (661), Expect = 1e-72
Identities = 132/198 (66%), Positives = 143/198 (72%)
Query: 36 LRSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 95
+ SLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60
Query: 96 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 155
RVRKNTEARRKGRHCGFGKR+GTANARMP K LW +KKIDRHLY
Sbjct: 61 YRVRKNTEARRKGRHCGFGKRKGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLY 120
Query: 156 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXXX 215
H LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQ
Sbjct: 121 HDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERIATK 180
Query: 216 XXXLLQTFAREDEAALTA 233
L+ A+EDE A A
Sbjct: 181 KQELIALHAKEDEIAAKA 198
>X74776-1|CAA52784.1| 203|Drosophila melanogaster ribosomal protein
L19 protein.
Length = 203
Score = 266 bits (652), Expect = 2e-71
Identities = 131/198 (66%), Positives = 142/198 (71%)
Query: 36 LRSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 95
+ SLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60
Query: 96 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLY 155
RVRKNTEARRK RHCGFGKR+GTANARMP K LW +KKIDRHLY
Sbjct: 61 YRVRKNTEARRKDRHCGFGKRKGTANARMPTKLLWMQRQPFCRRLLKKYRDSKKIDRHLY 120
Query: 156 HSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQXXXXXXXXXXXXXXXXXXXXXX 215
H LYMK KGNVFKNKRVLMEYIH+KKAEK R+KML+DQ
Sbjct: 121 HDLYMKCKGNVFKNKRVLMEYIHKKKAEKQRSKMLADQAEARRQKVREARKRREERIATK 180
Query: 216 XXXLLQTFAREDEAALTA 233
L+ A+EDE A A
Sbjct: 181 KQELIALHAKEDEIAAKA 198
>L23195-1|AAA60323.1| 4639|Drosophila melanogaster cytoplasmic
dynein heavy chian protein.
Length = 4639
Score = 28.7 bits (61), Expect = 7.3
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 65 NEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 98
N++ TNSR IK GLV++ ++HS+ R+
Sbjct: 104 NDVHFTNSRMASLACIKRGLVVEADKSIHSQLRL 137
>BT025964-1|ABG02208.1| 1312|Drosophila melanogaster IP16365p
protein.
Length = 1312
Score = 28.7 bits (61), Expect = 7.3
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 65 NEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 98
N++ TNSR IK GLV++ ++HS+ R+
Sbjct: 104 NDVHFTNSRMASLACIKRGLVVEADKSIHSQLRL 137
>AE014296-904|AAN11615.1| 3388|Drosophila melanogaster CG7507-PB,
isoform B protein.
Length = 3388
Score = 28.7 bits (61), Expect = 7.3
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 65 NEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 98
N++ TNSR IK GLV++ ++HS+ R+
Sbjct: 104 NDVHFTNSRMASLACIKRGLVVEADKSIHSQLRL 137
>AE014296-903|AAF47942.3| 4639|Drosophila melanogaster CG7507-PA,
isoform A protein.
Length = 4639
Score = 28.7 bits (61), Expect = 7.3
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 65 NEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 98
N++ TNSR IK GLV++ ++HS+ R+
Sbjct: 104 NDVHFTNSRMASLACIKRGLVVEADKSIHSQLRL 137
>X97196-1|CAA65830.1| 3429|Drosophila melanogaster hypothetical
protein protein.
Length = 3429
Score = 28.3 bits (60), Expect = 9.7
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Query: 33 RPILRSLKLQKR--LAASVMRCGKKKVWLDPNE 63
RP L + +Q + A VMR K+K WL NE
Sbjct: 2448 RPTLHEILMQDKQDFEAKVMRAAKRKRWLKANE 2480
>AE014298-856|AAF46135.2| 3419|Drosophila melanogaster CG3585-PA
protein.
Length = 3419
Score = 28.3 bits (60), Expect = 9.7
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Query: 33 RPILRSLKLQKR--LAASVMRCGKKKVWLDPNE 63
RP L + +Q + A VMR K+K WL NE
Sbjct: 2441 RPTLHEILMQDKQDFEAKVMRAAKRKRWLKANE 2473
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.320 0.132 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,148,475
Number of Sequences: 52641
Number of extensions: 249487
Number of successful extensions: 569
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 555
Number of HSP's gapped (non-prelim): 11
length of query: 235
length of database: 24,830,863
effective HSP length: 83
effective length of query: 152
effective length of database: 20,461,660
effective search space: 3110172320
effective search space used: 3110172320
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 60 (28.3 bits)
- SilkBase 1999-2023 -