Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002570-TA|BGIBMGA002570-PA|IPR007676|Ribophorin I
(463 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC27F1.07 |||dolichyl-diphospho-oligosaccharide-protein glycos... 146 8e-36
SPBC530.15c ||SPBC661.01|spermidine family transporter |Schizosa... 31 0.34
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 30 0.79
SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces po... 29 1.0
SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomy... 29 1.4
SPAC6F6.13c |||DUF726 family protein|Schizosaccharomyces pombe|c... 29 1.4
SPBC12C2.05c |||diacylglycerol binding protein Bzz1 |Schizosacch... 29 1.8
SPBC36.06c |spo9||farnesyl pyrophosphate synthetase|Schizosaccha... 28 3.2
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 28 3.2
SPBC146.07 |prp2|mis11|U2AF large subunit |Schizosaccharomyces p... 27 4.2
SPAC821.04c |cid13||poly|Schizosaccharomyces pombe|chr 1|||Manual 27 5.5
SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence orphan|Schizos... 27 7.3
SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4 |S... 27 7.3
SPAC22H10.10 |alp21|sto1|tubulin specific chaperone cofactor E|S... 27 7.3
SPAC17A2.01 |bsu1|SPAC1B1.05, bsu1|high-affinity import carrier ... 27 7.3
SPAC6F6.06c |rax2||cell polarity factor Rax2|Schizosaccharomyces... 26 9.7
>SPAC27F1.07 |||dolichyl-diphospho-oligosaccharide-protein
glycosyltransferase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 450
Score = 146 bits (353), Expect = 8e-36
Identities = 98/403 (24%), Positives = 189/403 (46%), Gaps = 20/403 (4%)
Query: 34 NVDRTVDISTQLVKVVSKIVLENSGKSSVKHFLFAVEEAAKNNLAFIGA--KDSNSKDLR 91
N RT+D+ + K ++ +++ N G + + + + ++ + K+ K
Sbjct: 26 NAIRTIDLRSTYTKTLTSLIIVNEGDEPQNTYRYFQQTSPGESVLSLSVSIKEEEKKGTN 85
Query: 92 LAETTVKGYDYVKFWRVELKEPLNAGATVNVVVETVFTKALQPYPTAITQQEDQFVKYVG 151
+ YD + L+ P+ G + ++++ ++P P A+ Q E+Q++ Y+
Sbjct: 86 PIKVNNNVYD------IPLQPPVKPGESRTLLIQAGLDGGVRPLPAAVDQDEEQYLVYLT 139
Query: 152 NLYTYSPYYTSTQKTSVILNTKTVESFTK-----VKPFSQVDGTIIYGPYANV-GPFTEK 205
LY SPY T Q+T +IL + ++++T + ++V T++Y + G +
Sbjct: 140 TLYLDSPYTTDLQRTRLILPSAKIDTYTTYNIDGAELPNRVGNTLVYESRETITGEDNDL 199
Query: 206 -ELSIHYKNNSPFLTVTRVERLIEVSHWGN-IAIEEVIEIEHTGAKLKGPFSRYDYQQDH 263
E+ + Y++ P + I++ + + + E + E+ AKLK F R + +
Sbjct: 200 GEIYVRYEHTVPIPRGADLYVQIDMHEYRKMLEVSERVVFENHAAKLKSNFDRAKWYMGN 259
Query: 264 HSGPASVRAYKTL--LPASASDVYYRDTNGNISTSNMKVKKDSVELDLRPRYPLFGGWRT 321
P S + + LP ++ DVYY D GNI+TS+M+V+ ++L PRYP+FGGW
Sbjct: 260 FYNPVSTAINRVVYSLPRNSKDVYYTDEVGNITTSHMRVEPHQTWIELNPRYPVFGGWNY 319
Query: 322 HYTLGYNVPSYEYLYHSGNEYLLKMRSIDHIFDDMQVDELVTKIILPEGSTGIKLNIPYS 381
+ L + +P YE S N + DM ++ V + PEG+T I++ +P
Sbjct: 320 LFQLDWKMP-YEEFRSSKNRREYLDIPLAWSPGDMIYEKAVWSYVFPEGATNIEIEMPVE 378
Query: 382 VTRLPDSLHFTYLDTKGRPVISFIKKNIVENHIQDF-QIRYTF 423
++ + +LDT GR V ++ N+ + D I Y +
Sbjct: 379 ISNSNVTKIHKFLDTLGRQVFTYEALNVTDGVPSDIVHISYEY 421
>SPBC530.15c ||SPBC661.01|spermidine family transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 516
Score = 31.1 bits (67), Expect = 0.34
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 417 FQIRYTFPRLLMLQEPLLVVGFLYTLFLCVIIYVRLD 453
F +TFP L++ EP+L+V YT F+ I+Y L+
Sbjct: 291 FHKYFTFPLRLLIFEPILLVVSTYTAFVYGILYGLLE 327
>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1666
Score = 29.9 bits (64), Expect = 0.79
Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 6/110 (5%)
Query: 39 VDISTQLVKVVSKIVLENSGKSSVKH-----FLFAVEEAAKNNLAFIGAKDSNSKDLRLA 93
VD+ +QL++++ KIVL+ S S + FL A++ + +I D D +A
Sbjct: 994 VDLPSQLIELLEKIVLQPSSFSENANLQNLLFLTAIKADKSRVMEYIDKLDKYDVD-EIA 1052
Query: 94 ETTVKGYDYVKFWRVELKEPLNAGATVNVVVETVFTKALQPYPTAITQQE 143
E ++ Y + +R+ + A +V + V Q Y + Q E
Sbjct: 1053 EIAIENGLYEEAFRIYKIHNKHEQAMKVLVEDIVSLDRAQDYAETVEQPE 1102
>SPAC32A11.02c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 851
Score = 29.5 bits (63), Expect = 1.0
Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 170 LNTKTVESFTKVKPFSQVDGTIIYGPYANVGPFTEKELSIHYKN 213
LN +T K+ F + + + PYAN+ F E +++H N
Sbjct: 453 LNLQTANVLPKLAEFRN-NNFVRFSPYANITSFRENMINVHLSN 495
>SPAC26F1.07 |||2-methylbutyraldehyde reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 321
Score = 29.1 bits (62), Expect = 1.4
Identities = 34/152 (22%), Positives = 63/152 (41%), Gaps = 12/152 (7%)
Query: 286 YRDTNGNISTSNMKVKKDSVELDLRPRYPLFGGWRTHYTLGYNVPSYEYLYHSGNEYLLK 345
+ DTN KVK +++L P P H LG +V +Y GN+ +
Sbjct: 169 FNDTNLERILKVAKVKPAVHQMELHPFLPQTEFVEKHKKLGIHVTAYSPF---GNQNTIY 225
Query: 346 MRSIDHIFDDMQVDELVTKIILPEGSTGIKLNIPYSVTR----LPDSLHFTYLDTKGRPV 401
I + + + ++ EG TG + + +++TR +P S++ + + +
Sbjct: 226 ESKIPKLIEHETIQKIAKS--KGEGVTGATIAVSWAITRGTSVIPKSVNEQRIKSNFK-Y 282
Query: 402 ISFIKKNIVENHIQDFQIRYTFPRLLMLQEPL 433
I K+++ E I IR F + EP+
Sbjct: 283 IPLTKEDMDE--INSIGIRARFNQATFSNEPV 312
>SPAC6F6.13c |||DUF726 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 778
Score = 29.1 bits (62), Expect = 1.4
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 8/81 (9%)
Query: 59 KSSVKHFLFAVEEAAKNNLAFI---GAKDSNSKDLRLAETT---VKGYDYVKFWRVELKE 112
K+ VK F F A + + G S D+RL+ T + G Y FW E+
Sbjct: 432 KADVKTFEFRPLHAQRRANVIVTVSGWMLSKEDDVRLSFATLDPIVGDIYSVFWEPEMLA 491
Query: 113 PLNAGATVNVVVETVFTKALQ 133
+AG T+N++ V T++LQ
Sbjct: 492 --SAGQTMNILATEVVTQSLQ 510
>SPBC12C2.05c |||diacylglycerol binding protein Bzz1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 28.7 bits (61), Expect = 1.8
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 152 NLYTYSPYYTSTQKTSVILNTKTVESFTKVKPFSQVDGTIIY 193
N YT +S +TS + N KT E+ T +P S+VDG ++Y
Sbjct: 485 NTYTDDMDSSSIYQTS-LSNVKTEET-TPAEPASKVDGVVLY 524
>SPBC36.06c |spo9||farnesyl pyrophosphate
synthetase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 351
Score = 27.9 bits (59), Expect = 3.2
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 7/58 (12%)
Query: 320 RTHYTLG--YNVPSYEYLYHSGNEYLLKMRSIDHIFDDMQVDELVTKIILPEGSTGIK 375
R HY N+ + LYH L++ + H F+D VD + +I L + STG+K
Sbjct: 283 RAHYGKAGSENIAVIKQLYHE-----LQIPELYHKFEDDMVDSISKEIDLIDESTGLK 335
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.9 bits (59), Expect = 3.2
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 3/93 (3%)
Query: 158 PYYTSTQKTSVILNTKTVESFTKVKPFSQVDGTIIYGPYANVGPFTEKELSIHYKNNSPF 217
PY +++ SV L+ S V P + P N P T ++L++H + SP
Sbjct: 336 PYLYNSRARSVALSEYHQPSNVFVPPEDPDLPAFFWDPIIN--PITSRQLTLHELDTSPE 393
Query: 218 LTVTRVERLIEVSHWGNIAIEEVIEIEHTGAKL 250
+ + E+ + E IE EHT + L
Sbjct: 394 DSAIEEDPNFEIP-FDPFFHSEDIEFEHTASAL 425
>SPBC146.07 |prp2|mis11|U2AF large subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 517
Score = 27.5 bits (58), Expect = 4.2
Identities = 13/52 (25%), Positives = 26/52 (50%)
Query: 143 EDQFVKYVGNLYTYSPYYTSTQKTSVILNTKTVESFTKVKPFSQVDGTIIYG 194
ED FV ++ +L+ + Y+ K +N E+F ++ + D T ++G
Sbjct: 212 EDAFVSFIEDLFISTTYHKPETKHFSSVNVCKEENFAILEVATPEDATFLWG 263
>SPAC821.04c |cid13||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 578
Score = 27.1 bits (57), Expect = 5.5
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 30 IKLKN-VDRTVD-ISTQLVKVVSKIVLENSGKSSVKHFLFAVEEAAKNNLAFIGAKDS 85
+ LKN VD D IS+QL ++ I+L +SG F+ +E+ K + K S
Sbjct: 38 LSLKNLVDIDTDLISSQLYELYDSIILNDSGLERRYAFVQKLEQILKKEFPYKNIKTS 95
>SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence
orphan|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1563
Score = 26.6 bits (56), Expect = 7.3
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 8/62 (12%)
Query: 136 PTAITQQEDQFVK----YVG---NLYTYSPYYTSTQKTSVILNTKTVESFTKVKPFSQVD 188
PT +T E V Y G + T +P T+T T+V++NT T ++V P +
Sbjct: 1095 PTTVTATETDIVTVTTGYTGTETSTVTVTPTGTATGTTTVVINTPTTTG-SEVLPTTGAT 1153
Query: 189 GT 190
GT
Sbjct: 1154 GT 1155
>SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 517
Score = 26.6 bits (56), Expect = 7.3
Identities = 18/59 (30%), Positives = 26/59 (44%)
Query: 238 EEVIEIEHTGAKLKGPFSRYDYQQDHHSGPASVRAYKTLLPASASDVYYRDTNGNISTS 296
E+V++ + ++ S Y +D HS P R L P+S Y R T G TS
Sbjct: 339 EDVLQADFLVSQQSSMVSSYVSSRDPHSMPYYRREPIPLRPSSRFYEYTRPTYGRTDTS 397
>SPAC22H10.10 |alp21|sto1|tubulin specific chaperone cofactor
E|Schizosaccharomyces pombe|chr 1|||Manual
Length = 511
Score = 26.6 bits (56), Expect = 7.3
Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Query: 159 YYTSTQKTSVILNT-KTVESFTKVKPF 184
YYTS + VI N K VE TK++PF
Sbjct: 364 YYTSCIRKLVIDNEIKDVEELTKIEPF 390
>SPAC17A2.01 |bsu1|SPAC1B1.05, bsu1|high-affinity import carrier for
pyridoxine, pyridoxal, and pyridoxamine
Bsu1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 526
Score = 26.6 bits (56), Expect = 7.3
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 385 LPDSLHFTYLDTKGRPVISFIKKNIVENHIQDFQIRYTFPRLLMLQEPLLVVGFLYTLFL 444
LP + Y + KGR ++ I KN ++ ++ + T +ML EP+++ LY +
Sbjct: 261 LPIKVITRYENAKGR-IVEGIPKNNLKEVLKKCKFVTTMGFRMMLTEPIILSMGLYNFYA 319
Query: 445 CVIIY 449
I Y
Sbjct: 320 YGISY 324
>SPAC6F6.06c |rax2||cell polarity factor Rax2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1155
Score = 26.2 bits (55), Expect = 9.7
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 9/69 (13%)
Query: 143 EDQFVKYVGNLYTYS--PYYTSTQKTSVILNTKTVESFTKVKP------FSQVDGTIIYG 194
+D+F Y +T+S P +TS + +V + T+E F VK F D I G
Sbjct: 131 DDKF-PYAYATFTFSDKPSFTSIYRWNVTNSNVTIEHFYNVKGNVDSLFFLNNDSVAISG 189
Query: 195 PYANVGPFT 203
+ + PF+
Sbjct: 190 NFTEISPFS 198
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.135 0.389
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,083,876
Number of Sequences: 5004
Number of extensions: 92964
Number of successful extensions: 288
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 280
Number of HSP's gapped (non-prelim): 16
length of query: 463
length of database: 2,362,478
effective HSP length: 75
effective length of query: 388
effective length of database: 1,987,178
effective search space: 771025064
effective search space used: 771025064
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 55 (26.2 bits)
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