GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002568-TA|BGIBMGA002568-PA|undefined
         (99 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    26   0.099
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       22   1.2  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      22   1.2  
AY569711-1|AAS86664.1|  401|Apis mellifera complementary sex det...    20   4.9  
DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.              19   8.6  
DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.              19   8.6  
DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              19   8.6  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      19   8.6  

>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 25.8 bits (54), Expect = 0.099
 Identities = 10/38 (26%), Positives = 20/38 (52%)

Query: 34  ENNNDCEDEEGKGFNESGSRELAYNRQGYGSNENRRGG 71
           +N N   D +  G  ++G+++    + G   N+N+R G
Sbjct: 480 QNGNRQNDNKQNGNRQNGNKQNDNKQNGNRQNDNKRNG 517



 Score = 22.2 bits (45), Expect = 1.2
 Identities = 9/38 (23%), Positives = 18/38 (47%)

Query: 34  ENNNDCEDEEGKGFNESGSRELAYNRQGYGSNENRRGG 71
           +N N   D       ++G+R+    + G   N+N++ G
Sbjct: 455 QNGNRQNDNRQNDNKQNGNRQNDNKQNGNRQNDNKQNG 492



 Score = 22.2 bits (45), Expect = 1.2
 Identities = 8/38 (21%), Positives = 19/38 (50%)

Query: 34  ENNNDCEDEEGKGFNESGSRELAYNRQGYGSNENRRGG 71
           +N N   D +  G  ++ +++    + G   N+N++ G
Sbjct: 470 QNGNRQNDNKQNGNRQNDNKQNGNRQNGNKQNDNKQNG 507



 Score = 19.4 bits (38), Expect = 8.6
 Identities = 8/38 (21%), Positives = 18/38 (47%)

Query: 34  ENNNDCEDEEGKGFNESGSRELAYNRQGYGSNENRRGG 71
           +N+N   D +  G  ++ +++    +     N NR+ G
Sbjct: 460 QNDNRQNDNKQNGNRQNDNKQNGNRQNDNKQNGNRQNG 497


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 22.2 bits (45), Expect = 1.2
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 43  EGKGFNESGSRELAYNRQGYGSNENRRGG 71
           +G+G  + GSR    NR   G N   + G
Sbjct: 82  KGRGHGKGGSRGRGGNRGRTGFNNKNKDG 110



 Score = 19.8 bits (39), Expect = 6.5
 Identities = 8/25 (32%), Positives = 11/25 (44%)

Query: 48  NESGSRELAYNRQGYGSNENRRGGR 72
           N+ G     Y    YG+ +NR   R
Sbjct: 107 NKDGDDNNDYEDNDYGNQDNRNDRR 131


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 1.2
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 28  DASVSIENNNDCEDEEGKGFNESGS 52
           D S+ ++NN+     EG G +E  S
Sbjct: 210 DFSMGVKNNHVSSKVEGNGVHEENS 234


>AY569711-1|AAS86664.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 20.2 bits (40), Expect = 4.9
 Identities = 8/32 (25%), Positives = 14/32 (43%)

Query: 38  DCEDEEGKGFNESGSRELAYNRQGYGSNENRR 69
           D   E+G  +   G R  + +R      ++RR
Sbjct: 236 DSRHEDGNSYRNDGERSCSRDRSREYKKKDRR 267


>DQ435337-1|ABD92652.1|  135|Apis mellifera OBP20 protein.
          Length = 135

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)

Query: 34 ENNNDCEDEEGKGFNE 49
          E N D EDE+ + +NE
Sbjct: 49 EVNFDVEDEKPQRYNE 64


>DQ435336-1|ABD92651.1|  135|Apis mellifera OBP19 protein.
          Length = 135

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 8/16 (50%), Positives = 11/16 (68%)

Query: 34 ENNNDCEDEEGKGFNE 49
          E N D EDE+ + +NE
Sbjct: 49 EVNFDVEDEKPQRYNE 64


>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 8/19 (42%), Positives = 13/19 (68%)

Query: 25 DERDASVSIENNNDCEDEE 43
          D++ A+  IE N D ED++
Sbjct: 40 DQQKANDVIEGNIDVEDKK 58


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 8/19 (42%), Positives = 10/19 (52%)

Query: 48  NESGSRELAYNRQGYGSNE 66
           +E GS    Y+ Q YG  E
Sbjct: 582 SEDGSETFKYSSQPYGFPE 600


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.305    0.128    0.361 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,281
Number of Sequences: 429
Number of extensions: 777
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of query: 99
length of database: 140,377
effective HSP length: 49
effective length of query: 50
effective length of database: 119,356
effective search space:  5967800
effective search space used:  5967800
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (19.7 bits)
S2: 38 (19.4 bits)