GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002564-TA|BGIBMGA002564-PA|undefined
         (263 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     28   0.31 
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           24   5.1  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           23   6.8  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    23   9.0  

>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 27.9 bits (59), Expect = 0.31
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 9/62 (14%)

Query: 92  TGVQPQQYYRTYNVQPAVYRPAPTYTSYQPAIYNT-------GYYRDQGSAIASAQNLNN 144
           T ++P  YY +Y  + A ++P P Y  Y+P  Y T       G   DQ S  +S ++ N+
Sbjct: 171 TDIKPM-YYPSYPTE-ANFQPHPYYPKYEPDAYITASTERSRGVTGDQPSLQSSYESYNS 228

Query: 145 YG 146
            G
Sbjct: 229 SG 230


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 31/165 (18%), Positives = 53/165 (32%), Gaps = 10/165 (6%)

Query: 67   NAEAYGGGFANSDGPAYASGIGIANTGVQPQQYYRTYNVQPAVYRPAPTYTSYQPAIYNT 126
            N  A  G   N+ G     G  +A+T +   Q++    + P   R    Y +     YNT
Sbjct: 1222 NIYATAGNDYNTPGRPSTLGPSVASTRLDGPQHHSYATIGPNCPRNCDNYDTVSNCKYNT 1281

Query: 127  GYYRDQGSAIASAQNLNNYGTXXXXXXXX--------XXXXXXXXTVSNLRGLGYGSVAS 178
              +        +  +     T                        T ++   +   +   
Sbjct: 1282 TQHHQTHHERRTTADFGRKATDGRQHEYAVPSNCLLDTTHETYNTTATSCERIAGETFEC 1341

Query: 179  ATANDGFGTVI--SSADSRGTAISSAQTRDGQGDYSNVVSAAQNI 221
             + +  F T    S +DS   +ISSA   D QG + +    A N+
Sbjct: 1342 TSTSSKFSTSSRGSGSDSGSHSISSAAQHDFQGSHRSPNGCAPNL 1386


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 10/32 (31%), Positives = 15/32 (46%)

Query: 66  GNAEAYGGGFANSDGPAYASGIGIANTGVQPQ 97
           G+  + GGG   +DG  Y +     + G  PQ
Sbjct: 322 GSGGSSGGGLLGTDGSQYYTSAADPSMGNDPQ 353


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 15/63 (23%), Positives = 21/63 (33%), Gaps = 4/63 (6%)

Query: 63  FQTGNAEAYGGGFANSDGPAYASGIGIANTGVQPQQYYRTYNVQPAVYRPAPTYTSYQPA 122
           F    A  Y     N++     +G    + G Q   Y+      P +Y   P    Y P 
Sbjct: 13  FVNSIASCYPNNSQNTNSSPNTAG----SQGSQNDGYFPPSTYAPNIYPGTPHQAHYSPQ 68

Query: 123 IYN 125
            YN
Sbjct: 69  SYN 71


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.314    0.131    0.383 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,814
Number of Sequences: 2123
Number of extensions: 7463
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 5
length of query: 263
length of database: 516,269
effective HSP length: 63
effective length of query: 200
effective length of database: 382,520
effective search space: 76504000
effective search space used: 76504000
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 47 (23.0 bits)