GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002564-TA|BGIBMGA002564-PA|undefined
         (263 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2068|AAF49980.2| 1713|Drosophila melanogaster CG5700-PB...    39   0.006
AF203342-1|AAF13280.1| 1729|Drosophila melanogaster pericardine ...    36   0.075
AY061169-1|AAL28717.1|  346|Drosophila melanogaster LD13761p pro...    30   2.8  
AE014134-1186|AAF52452.2|  908|Drosophila melanogaster CG10354-P...    30   2.8  
AE014296-3165|AAF49150.3| 1242|Drosophila melanogaster CG9299-PA...    30   3.7  
X96913-1|CAA65632.1|  630|Drosophila melanogaster metallopeptida...    29   6.5  
AY051750-1|AAK93174.1|  630|Drosophila melanogaster LD28328p pro...    29   6.5  
AE014298-1765|AAF48161.1| 1545|Drosophila melanogaster CG11245-P...    29   6.5  
AE014134-1537|AAF52693.1|  630|Drosophila melanogaster CG10593-P...    29   6.5  
M27495-1|AAA85449.1|  723|Drosophila melanogaster muscarinic ace...    29   8.6  
M23412-1|AAA28676.1|  788|Drosophila melanogaster protein ( Dros...    29   8.6  
BT025816-1|ABF85716.1|  580|Drosophila melanogaster IP02907p pro...    29   8.6  
AE014298-2404|AAF48609.1|  511|Drosophila melanogaster CG9968-PB...    29   8.6  
AE014297-426|AAF51896.2|  171|Drosophila melanogaster CG15597-PA...    29   8.6  
AE013599-3856|AAM68310.1|  805|Drosophila melanogaster CG4356-PB...    29   8.6  
AE013599-3855|AAF47197.1|  788|Drosophila melanogaster CG4356-PA...    29   8.6  

>AE014296-2068|AAF49980.2| 1713|Drosophila melanogaster CG5700-PB
            protein.
          Length = 1713

 Score = 39.1 bits (87), Expect = 0.006
 Identities = 44/153 (28%), Positives = 53/153 (34%), Gaps = 6/153 (3%)

Query: 73   GGFANSDGPAYASGIGIANTGVQPQQYYRTYNVQPAVYRPAPTYTSYQPAIYNTGYYRDQ 132
            GG A +  P Y  G      G Q    +  Y  QP +   AP Y +       TG    Q
Sbjct: 1135 GGQATAGQPGYGPG-SQPGIGGQTVGGHGGYGSQPGI-GGAPVYGTQPGGGGQTGVIGGQ 1192

Query: 133  GSAIASAQNLNNYGTXXXXXXXXXXXXXXXXTVSNLRGLGYGSVASAT--ANDGFGTVIS 190
               I        YGT                TV    G G G VA+ T  A+D F    S
Sbjct: 1193 PGQIGDRVGQPGYGTQTGQIGAPGRYTDGSQTVPGAVGTG-GVVAAGTSGADDAFSQAES 1251

Query: 191  SADSRGTAISSAQTRDGQGDYSNVVSAAQNIGG 223
            S    G A +SAQ +   G     VS   + GG
Sbjct: 1252 SIGD-GQASASAQGKKNGGTAKTQVSGTYSSGG 1283


>AF203342-1|AAF13280.1| 1729|Drosophila melanogaster pericardine
            protein.
          Length = 1729

 Score = 35.5 bits (78), Expect = 0.075
 Identities = 45/163 (27%), Positives = 55/163 (33%), Gaps = 8/163 (4%)

Query: 65   TGNAEAYGG--GFANSDGPAYASGIGIANTGVQPQQYYRTYNVQPAVYRPAPTYTSYQPA 122
            +G    YG   G   +  P Y S  G        Q  Y   + QP +   AP Y +    
Sbjct: 1141 SGGQPGYGTQPGQTGAGQPGYGSLPGTGGQATAGQPGYGPGS-QPGI-GGAPVYGTQPGG 1198

Query: 123  IYNTGYYRDQGSAIASAQNLNNYGTXXXXXXXXXXXXXXXXTVSNLRGLGYGSVASAT-- 180
               TG    Q   I        YGT                TV    G G G VA+ T  
Sbjct: 1199 GGQTGVIGGQPGQIGDRVGQPGYGTQTGQIGAPGRYTDGSQTVPGAVGTG-GVVAAGTSG 1257

Query: 181  ANDGFGTVISSADSRGTAISSAQTRDGQGDYSNVVSAAQNIGG 223
            A+D F    SS    G A +SAQ +   G     VS   + GG
Sbjct: 1258 ADDAFSQAESSIGD-GQASASAQGKKNGGTAKTQVSGTYSSGG 1299


>AY061169-1|AAL28717.1|  346|Drosophila melanogaster LD13761p
           protein.
          Length = 346

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 24/80 (30%), Positives = 25/80 (31%), Gaps = 6/80 (7%)

Query: 64  QTGNAEAYGGGFANSDGPAYASGIGIANTGVQPQQYYRTYNVQPAVYRPAPTYTSYQPAI 123
           Q G     GGG     G  Y  GIG  N G   Q   R YN     Y     Y  +Q   
Sbjct: 235 QQGGGGNGGGGGGYGQGGGYGQGIG-GNQGQSYQNNSRNYN-----YNYNNNYNQHQGGG 288

Query: 124 YNTGYYRDQGSAIASAQNLN 143
           Y   Y   Q       Q  N
Sbjct: 289 YQNNYNNRQQQQYGHNQRFN 308


>AE014134-1186|AAF52452.2|  908|Drosophila melanogaster CG10354-PA
           protein.
          Length = 908

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 24/80 (30%), Positives = 25/80 (31%), Gaps = 6/80 (7%)

Query: 64  QTGNAEAYGGGFANSDGPAYASGIGIANTGVQPQQYYRTYNVQPAVYRPAPTYTSYQPAI 123
           Q G     GGG     G  Y  GIG  N G   Q   R YN     Y     Y  +Q   
Sbjct: 797 QQGGGGNGGGGGGYGQGGGYGQGIG-GNQGQSYQNNSRNYN-----YNYNNNYNQHQGGG 850

Query: 124 YNTGYYRDQGSAIASAQNLN 143
           Y   Y   Q       Q  N
Sbjct: 851 YQNNYNNRQQQQYGHNQRFN 870


>AE014296-3165|AAF49150.3| 1242|Drosophila melanogaster CG9299-PA
           protein.
          Length = 1242

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 33/147 (22%), Positives = 53/147 (36%), Gaps = 12/147 (8%)

Query: 68  AEAYGGGFANSDGPAYASGIGIANTGVQPQQYYRTYNVQPAVYRPAPTYTSYQPAIYNTG 127
           A +YGG  + +    Y S   IA           TY+  PA+ + + +Y +      +  
Sbjct: 344 AASYGGTASGALSHQYVSQPAIAKVSTYAAPTVATYSSGPAISKLSTSYGASGSGAVSHQ 403

Query: 128 YYRDQGSAIA----------SAQNLNNYGTXXXXXXXXXXXXXXXXTVSNLRGLGYGSVA 177
           Y      AIA          +A  +++Y T                T S+  G GYGS  
Sbjct: 404 YVSKPAVAIAAPAVAKVATYAAPAISSYSTGPAISKVASYAAPTVSTYSS--GYGYGSSG 461

Query: 178 SATANDGFGTVISSADSRGTAISSAQT 204
           S   +  + +  + A S   AI+   T
Sbjct: 462 SGAVSHQYVSKPAVAISAAPAIAKVAT 488


>X96913-1|CAA65632.1|  630|Drosophila melanogaster metallopeptidase
           protein.
          Length = 630

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 12/17 (70%), Positives = 12/17 (70%)

Query: 98  QYYRTYNVQPAVYRPAP 114
           QYY  Y  QPAVYR AP
Sbjct: 381 QYYLQYEQQPAVYRGAP 397


>AY051750-1|AAK93174.1|  630|Drosophila melanogaster LD28328p
           protein.
          Length = 630

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 12/17 (70%), Positives = 12/17 (70%)

Query: 98  QYYRTYNVQPAVYRPAP 114
           QYY  Y  QPAVYR AP
Sbjct: 381 QYYLQYEQQPAVYRGAP 397


>AE014298-1765|AAF48161.1| 1545|Drosophila melanogaster CG11245-PA
           protein.
          Length = 1545

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 4/61 (6%)

Query: 71  YGGGFANSDGPAYASGIGI-ANTGVQP-QQYYRTYN-VQPAVYR-PAPTYTSYQPAIYNT 126
           Y GG +    P Y+SG+G+    G  P   Y  +YN   PA Y  P    +   P+ Y++
Sbjct: 12  YSGGSSQLYSPYYSSGLGLNLGMGSSPGSSYTSSYNRSYPASYMVPLSPSSPRSPSSYSS 71

Query: 127 G 127
           G
Sbjct: 72  G 72


>AE014134-1537|AAF52693.1|  630|Drosophila melanogaster CG10593-PA
           protein.
          Length = 630

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 12/17 (70%), Positives = 12/17 (70%)

Query: 98  QYYRTYNVQPAVYRPAP 114
           QYY  Y  QPAVYR AP
Sbjct: 381 QYYLQYEQQPAVYRGAP 397


>M27495-1|AAA85449.1|  723|Drosophila melanogaster muscarinic
           acetylcholine receptor protein.
          Length = 723

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 15/39 (38%), Positives = 18/39 (46%)

Query: 67  NAEAYGGGFANSDGPAYASGIGIANTGVQPQQYYRTYNV 105
           NA   G G  N +G    SGIG+  TG    +  RT  V
Sbjct: 437 NASHNGNGAVNGNGTGNGSGIGLGTTGNATHRDSRTLPV 475


>M23412-1|AAA28676.1|  788|Drosophila melanogaster protein (
           Drosophila muscarinicacetylcholine receptor mRNA,
           complete cds. ).
          Length = 788

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 15/39 (38%), Positives = 18/39 (46%)

Query: 67  NAEAYGGGFANSDGPAYASGIGIANTGVQPQQYYRTYNV 105
           NA   G G  N +G    SGIG+  TG    +  RT  V
Sbjct: 501 NASHNGNGAVNGNGAGNGSGIGLGTTGNATHRDSRTLPV 539


>BT025816-1|ABF85716.1|  580|Drosophila melanogaster IP02907p
           protein.
          Length = 580

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 15/39 (38%), Positives = 18/39 (46%)

Query: 67  NAEAYGGGFANSDGPAYASGIGIANTGVQPQQYYRTYNV 105
           NA   G G  N +G    SGIG+  TG    +  RT  V
Sbjct: 293 NASHNGNGAVNGNGAGNGSGIGLGTTGNATHRDSRTLPV 331


>AE014298-2404|AAF48609.1|  511|Drosophila melanogaster CG9968-PB,
           isoform B protein.
          Length = 511

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)

Query: 100 YRTYNVQPAVYRPAPTYTSY-QPAIYNTGYYRDQG 133
           Y T N  PA Y P P +  Y QP++ N+ Y  D+G
Sbjct: 89  YPTSNPYPAQYAP-PAHNHYQQPSVSNSPYPADRG 122


>AE014297-426|AAF51896.2|  171|Drosophila melanogaster CG15597-PA
           protein.
          Length = 171

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 12/30 (40%), Positives = 16/30 (53%)

Query: 63  FQTGNAEAYGGGFANSDGPAYASGIGIANT 92
           ++ G A  YGGG+    G AY  G G  +T
Sbjct: 96  YRGGYAGGYGGGYGGGYGGAYGGGYGGGST 125


>AE013599-3856|AAM68310.1|  805|Drosophila melanogaster CG4356-PB,
           isoform B protein.
          Length = 805

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 15/39 (38%), Positives = 18/39 (46%)

Query: 67  NAEAYGGGFANSDGPAYASGIGIANTGVQPQQYYRTYNV 105
           NA   G G  N +G    SGIG+  TG    +  RT  V
Sbjct: 518 NASHNGNGAVNGNGAGNGSGIGLGTTGNATHRDSRTLPV 556


>AE013599-3855|AAF47197.1|  788|Drosophila melanogaster CG4356-PA,
           isoform A protein.
          Length = 788

 Score = 28.7 bits (61), Expect = 8.6
 Identities = 15/39 (38%), Positives = 18/39 (46%)

Query: 67  NAEAYGGGFANSDGPAYASGIGIANTGVQPQQYYRTYNV 105
           NA   G G  N +G    SGIG+  TG    +  RT  V
Sbjct: 501 NASHNGNGAVNGNGAGNGSGIGLGTTGNATHRDSRTLPV 539


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.314    0.131    0.383 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,625,010
Number of Sequences: 52641
Number of extensions: 392349
Number of successful extensions: 1403
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1386
Number of HSP's gapped (non-prelim): 19
length of query: 263
length of database: 24,830,863
effective HSP length: 84
effective length of query: 179
effective length of database: 20,409,019
effective search space: 3653214401
effective search space used: 3653214401
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 61 (28.7 bits)