GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002562-TA|BGIBMGA002562-PA|undefined
         (423 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    25   2.9  
DQ974168-1|ABJ52808.1|  447|Anopheles gambiae serpin 9 protein.        25   5.2  

>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 25.4 bits (53), Expect = 2.9
 Identities = 12/27 (44%), Positives = 17/27 (62%)

Query: 291 LAHKTKVVGIVDHKAKEVVSVIHVVKG 317
           L H+T +V I  H +KE+VS   V +G
Sbjct: 720 LIHRTYIVKIDKHMSKEIVSSSGVPQG 746


>DQ974168-1|ABJ52808.1|  447|Anopheles gambiae serpin 9 protein.
          Length = 447

 Score = 24.6 bits (51), Expect = 5.2
 Identities = 9/19 (47%), Positives = 14/19 (73%)

Query: 345 LKLKAHTGTVVDLVLVTMM 363
           +KL  H GTV  L+L+T++
Sbjct: 1   MKLSTHLGTVAPLLLLTLL 19


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.318    0.131    0.373 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 274,554
Number of Sequences: 2123
Number of extensions: 9181
Number of successful extensions: 12
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 2
length of query: 423
length of database: 516,269
effective HSP length: 66
effective length of query: 357
effective length of database: 376,151
effective search space: 134285907
effective search space used: 134285907
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 49 (23.8 bits)