BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002560-TA|BGIBMGA002560-PA|undefined
(171 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC010931-1|AAH10931.1| 119|Homo sapiens MEF2B protein protein. 87 2e-17
BC004449-1|AAH04449.1| 109|Homo sapiens MEF2B protein protein. 87 2e-17
M77830-1|AAA85135.1| 2871|Homo sapiens desmoplakin I protein. 31 2.7
AL031058-1|CAA19927.1| 2871|Homo sapiens desmoplakin protein. 31 2.7
AB209992-1|BAE06074.1| 2319|Homo sapiens DSP variant protein pro... 31 2.7
Z98946-1|CAB46379.1| 577|Homo sapiens moesin protein. 30 3.6
M69066-1|AAA36322.1| 577|Homo sapiens moesin B protein. 30 3.6
BC017293-1|AAH17293.1| 577|Homo sapiens moesin protein. 30 3.6
BC017186-1|AAH17186.1| 331|Homo sapiens coiled-coil domain cont... 30 3.6
AL591507-1|CAI39952.1| 983|Homo sapiens RP3-398G3.1 protein. 30 3.6
AL049548-1|CAI42743.1| 983|Homo sapiens RP3-398G3.1 protein. 30 3.6
AK222661-1|BAD96381.1| 331|Homo sapiens limkain beta 2 variant ... 30 3.6
AK026124-1|BAB15366.1| 331|Homo sapiens osaminidase mRNA. prot... 30 3.6
AF535142-1|AAN03486.1| 8749|Homo sapiens enaptin protein. 30 3.6
AF495910-1|AAN60442.1| 8797|Homo sapiens nesprin-1 protein. 30 3.6
AB015292-1|BAB82436.1| 331|Homo sapiens limkain beta 2 protein. 30 3.6
Z38133-1|CAA86293.1| 1937|Homo sapiens Myosin protein. 29 8.3
AF295356-1|AAK71522.1| 527|Homo sapiens moesin/anaplastic lymph... 29 8.3
>BC010931-1|AAH10931.1| 119|Homo sapiens MEF2B protein protein.
Length = 119
Score = 87.4 bits (207), Expect = 2e-17
Identities = 35/99 (35%), Positives = 69/99 (69%)
Query: 8 DAELETXXXXXXERISENMHIVANEPSLALYRLQEHVRKALPPMVERRVEVTKLQYELQG 67
+ E++ ++ +E+++++ANEPS+ALYRLQEHVR++LP + + + ++ + + + QG
Sbjct: 3 EPEMQLKGKKVTDKFTESVYVLANEPSVALYRLQEHVRRSLPELAQHKADMQRWEEQSQG 62
Query: 68 RCYDVEYALSAVKSMDGAATSFKNIQEMLKQCIFLKQQL 106
Y VEYA SAVK++ ++ F++++ +LKQ I ++ +
Sbjct: 63 AIYTVEYACSAVKNLVDSSVYFRSVEGLLKQAISIRDHM 101
>BC004449-1|AAH04449.1| 109|Homo sapiens MEF2B protein protein.
Length = 109
Score = 87.4 bits (207), Expect = 2e-17
Identities = 35/99 (35%), Positives = 69/99 (69%)
Query: 8 DAELETXXXXXXERISENMHIVANEPSLALYRLQEHVRKALPPMVERRVEVTKLQYELQG 67
+ E++ ++ +E+++++ANEPS+ALYRLQEHVR++LP + + + ++ + + + QG
Sbjct: 3 EPEMQLKGKKVTDKFTESVYVLANEPSVALYRLQEHVRRSLPELAQHKADMQRWEEQSQG 62
Query: 68 RCYDVEYALSAVKSMDGAATSFKNIQEMLKQCIFLKQQL 106
Y VEYA SAVK++ ++ F++++ +LKQ I ++ +
Sbjct: 63 AIYTVEYACSAVKNLVDSSVYFRSVEGLLKQAISIRDHM 101
>M77830-1|AAA85135.1| 2871|Homo sapiens desmoplakin I protein.
Length = 2871
Score = 30.7 bits (66), Expect = 2.7
Identities = 25/106 (23%), Positives = 51/106 (48%), Gaps = 8/106 (7%)
Query: 58 VTKLQYELQGRCYDVEYALSAVKSMDGAATSFKNIQEMLKQCIFLKQQLKYEESRRNKKD 117
VT + G C DV + K ++ + K ML + +++Q+++ E R K+
Sbjct: 635 VTTTEITHHGTCQDVNHN----KVIETNRENDKQETWMLMELQKIRRQIEHCEGRMTLKN 690
Query: 118 SNSVYKRLSAHIVLDLPDL----SEFSMVRETTNRIENMMAHARGS 159
+ S HI + + +L ++ + E N++++M+A+ RGS
Sbjct: 691 LPLADQGSSHHITVKINELKSVQNDSQAIAEVLNQLKDMLANFRGS 736
>AL031058-1|CAA19927.1| 2871|Homo sapiens desmoplakin protein.
Length = 2871
Score = 30.7 bits (66), Expect = 2.7
Identities = 25/106 (23%), Positives = 51/106 (48%), Gaps = 8/106 (7%)
Query: 58 VTKLQYELQGRCYDVEYALSAVKSMDGAATSFKNIQEMLKQCIFLKQQLKYEESRRNKKD 117
VT + G C DV + K ++ + K ML + +++Q+++ E R K+
Sbjct: 635 VTTTEITHHGTCQDVNHN----KVIETNRENDKQETWMLMELQKIRRQIEHCEGRMTLKN 690
Query: 118 SNSVYKRLSAHIVLDLPDL----SEFSMVRETTNRIENMMAHARGS 159
+ S HI + + +L ++ + E N++++M+A+ RGS
Sbjct: 691 LPLADQGSSHHITVKINELKSVQNDSQAIAEVLNQLKDMLANFRGS 736
>AB209992-1|BAE06074.1| 2319|Homo sapiens DSP variant protein
protein.
Length = 2319
Score = 30.7 bits (66), Expect = 2.7
Identities = 25/106 (23%), Positives = 51/106 (48%), Gaps = 8/106 (7%)
Query: 58 VTKLQYELQGRCYDVEYALSAVKSMDGAATSFKNIQEMLKQCIFLKQQLKYEESRRNKKD 117
VT + G C DV + K ++ + K ML + +++Q+++ E R K+
Sbjct: 682 VTTTEITHHGTCQDVNHN----KVIETNRENDKQETWMLMELQKIRRQIEHCEGRMTLKN 737
Query: 118 SNSVYKRLSAHIVLDLPDL----SEFSMVRETTNRIENMMAHARGS 159
+ S HI + + +L ++ + E N++++M+A+ RGS
Sbjct: 738 LPLADQGSSHHITVKINELKSVQNDSQAIAEVLNQLKDMLANFRGS 783
>Z98946-1|CAB46379.1| 577|Homo sapiens moesin protein.
Length = 577
Score = 30.3 bits (65), Expect = 3.6
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 5/112 (4%)
Query: 20 ERISENMHIVANEPSLALYRLQEHVRKALPPMVERRVEVTKLQYELQGRCYDVEYALSAV 79
E + E + + + A L+E R+AL ER+ + Q E + + + A A
Sbjct: 345 EELMERLKQIEEQTKKAQQELEEQTRRALELEQERK----RAQSEAEKLAKERQEAEEAK 400
Query: 80 KSMDGAATSFKNIQEMLK-QCIFLKQQLKYEESRRNKKDSNSVYKRLSAHIV 130
+++ A+ K QE L + L ++ E R KK+S +V + A +V
Sbjct: 401 EALLQASRDQKKTQEQLALEMAELTARISQLEMARQKKESEAVEWQQKAQMV 452
>M69066-1|AAA36322.1| 577|Homo sapiens moesin B protein.
Length = 577
Score = 30.3 bits (65), Expect = 3.6
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 5/112 (4%)
Query: 20 ERISENMHIVANEPSLALYRLQEHVRKALPPMVERRVEVTKLQYELQGRCYDVEYALSAV 79
E + E + + + A L+E R+AL ER+ + Q E + + + A A
Sbjct: 345 EELMERLKQIEEQTKKAQQELEEQTRRALELEQERK----RAQSEAEKLAKERQEAEEAK 400
Query: 80 KSMDGAATSFKNIQEMLK-QCIFLKQQLKYEESRRNKKDSNSVYKRLSAHIV 130
+++ A+ K QE L + L ++ E R KK+S +V + A +V
Sbjct: 401 EALLQASRDQKKTQEQLALEMAELTARISQLEMARQKKESEAVEWQQKAQMV 452
>BC017293-1|AAH17293.1| 577|Homo sapiens moesin protein.
Length = 577
Score = 30.3 bits (65), Expect = 3.6
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 5/112 (4%)
Query: 20 ERISENMHIVANEPSLALYRLQEHVRKALPPMVERRVEVTKLQYELQGRCYDVEYALSAV 79
E + E + + + A L+E R+AL ER+ + Q E + + + A A
Sbjct: 345 EELMERLKQIEEQTKKAQQELEEQTRRALELEQERK----RAQSEAEKLAKERQEAEEAK 400
Query: 80 KSMDGAATSFKNIQEMLK-QCIFLKQQLKYEESRRNKKDSNSVYKRLSAHIV 130
+++ A+ K QE L + L ++ E R KK+S +V + A +V
Sbjct: 401 EALLQASRDQKKTQEQLALEMAELTARISQLEMARQKKESEAVEWQQKAQMV 452
>BC017186-1|AAH17186.1| 331|Homo sapiens coiled-coil domain
containing 92 protein.
Length = 331
Score = 30.3 bits (65), Expect = 3.6
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 65 LQGRCYDVEYALSAVKSMDGAATSFKNIQEMLKQCIFLKQQLKYEES 111
LQ C D+ Y L+ VKS + E+ K+C L+ QLK +E+
Sbjct: 55 LQQHCTDLTYELT-VKSSEQTGDGTSKSSELKKRCEELEAQLKVKEN 100
>AL591507-1|CAI39952.1| 983|Homo sapiens RP3-398G3.1 protein.
Length = 983
Score = 30.3 bits (65), Expect = 3.6
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Query: 57 EVTKLQYELQGRCYDVEYALSAVKSMDGAATSFKNIQEMLKQCIFLKQQLKYEESRRNKK 116
E K+ E C +E SA+ + +A N +++ L+QQ YE+ R K
Sbjct: 845 ETYKVLQEHMDLCQALESLSSAITAFSASARKVVNRDSCVQEAAALQQQ--YEDILRRAK 902
Query: 117 DSNSVYKRLSAHIVLDLPDLSEF 139
+ + + L AH +LS F
Sbjct: 903 ERQTALENLLAHWQRLEKELSSF 925
>AL049548-1|CAI42743.1| 983|Homo sapiens RP3-398G3.1 protein.
Length = 983
Score = 30.3 bits (65), Expect = 3.6
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Query: 57 EVTKLQYELQGRCYDVEYALSAVKSMDGAATSFKNIQEMLKQCIFLKQQLKYEESRRNKK 116
E K+ E C +E SA+ + +A N +++ L+QQ YE+ R K
Sbjct: 845 ETYKVLQEHMDLCQALESLSSAITAFSASARKVVNRDSCVQEAAALQQQ--YEDILRRAK 902
Query: 117 DSNSVYKRLSAHIVLDLPDLSEF 139
+ + + L AH +LS F
Sbjct: 903 ERQTALENLLAHWQRLEKELSSF 925
>AK222661-1|BAD96381.1| 331|Homo sapiens limkain beta 2 variant
protein.
Length = 331
Score = 30.3 bits (65), Expect = 3.6
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 65 LQGRCYDVEYALSAVKSMDGAATSFKNIQEMLKQCIFLKQQLKYEES 111
LQ C D+ Y L+ VKS + E+ K+C L+ QLK +E+
Sbjct: 55 LQQHCTDLTYELT-VKSSEQTGDGTSKSSELKKRCEELEAQLKVKEN 100
>AK026124-1|BAB15366.1| 331|Homo sapiens osaminidase mRNA.
protein.
Length = 331
Score = 30.3 bits (65), Expect = 3.6
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 65 LQGRCYDVEYALSAVKSMDGAATSFKNIQEMLKQCIFLKQQLKYEES 111
LQ C D+ Y L+ VKS + E+ K+C L+ QLK +E+
Sbjct: 55 LQQHCTDLTYELT-VKSSEQTGDGTSKSSELKKRCEELEAQLKVKEN 100
>AF535142-1|AAN03486.1| 8749|Homo sapiens enaptin protein.
Length = 8749
Score = 30.3 bits (65), Expect = 3.6
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Query: 57 EVTKLQYELQGRCYDVEYALSAVKSMDGAATSFKNIQEMLKQCIFLKQQLKYEESRRNKK 116
E K+ E C +E SA+ + +A N +++ L+QQ YE+ R K
Sbjct: 1594 ETYKVLQEHMDLCQALESLSSAITAFSASARKVVNRDSCVQEAAALQQQ--YEDILRRAK 1651
Query: 117 DSNSVYKRLSAHIVLDLPDLSEF 139
+ + + L AH +LS F
Sbjct: 1652 ERQTALENLLAHWQRLEKELSSF 1674
>AF495910-1|AAN60442.1| 8797|Homo sapiens nesprin-1 protein.
Length = 8797
Score = 30.3 bits (65), Expect = 3.6
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Query: 57 EVTKLQYELQGRCYDVEYALSAVKSMDGAATSFKNIQEMLKQCIFLKQQLKYEESRRNKK 116
E K+ E C +E SA+ + +A N +++ L+QQ YE+ R K
Sbjct: 1587 ETYKVLQEHMDLCQALESLSSAITAFSASARKVVNRDSCVQEAAALQQQ--YEDILRRAK 1644
Query: 117 DSNSVYKRLSAHIVLDLPDLSEF 139
+ + + L AH +LS F
Sbjct: 1645 ERQTALENLLAHWQRLEKELSSF 1667
>AB015292-1|BAB82436.1| 331|Homo sapiens limkain beta 2 protein.
Length = 331
Score = 30.3 bits (65), Expect = 3.6
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 65 LQGRCYDVEYALSAVKSMDGAATSFKNIQEMLKQCIFLKQQLKYEES 111
LQ C D+ Y L+ VKS + E+ K+C L+ QLK +E+
Sbjct: 55 LQQHCTDLTYELT-VKSSEQTGDGTSKSSELKKRCEELEAQLKVKEN 100
>Z38133-1|CAA86293.1| 1937|Homo sapiens Myosin protein.
Length = 1937
Score = 29.1 bits (62), Expect = 8.3
Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 13/148 (8%)
Query: 4 VYQGDAELETXXXXXXERISENMHIVANEPSLALYRLQEHVRKALPPMVERRVEVTKLQY 63
V Q + ET E + E +A L +EHV +LQ
Sbjct: 1371 VAQWRTKYETDAIQRTEELEEAKKKLAQR----LQEAEEHVEAVNAKCASLEKTKQRLQN 1426
Query: 64 ELQGRCYDVEYALSAVKSMDGAATSFKNIQEMLKQCIFLKQQLKYEESRRNKKDSNSVYK 123
E++ DVE + +A ++D +F + KQ KYEE++ + S +
Sbjct: 1427 EVEDLMLDVERSNAACAALDKKQRNFDKVLSEWKQ--------KYEETQAELEASQKESR 1478
Query: 124 RLSAHIVLDLPDLSEFSMVRETTNRIEN 151
LS + + ++ E S+ + T R EN
Sbjct: 1479 SLSTEL-FKVKNVYEESLDQLETLRREN 1505
>AF295356-1|AAK71522.1| 527|Homo sapiens moesin/anaplastic lymphoma
kinase fusion protein protein.
Length = 527
Score = 29.1 bits (62), Expect = 8.3
Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
Query: 20 ERISENMHIVANEPSLALYRLQEHVRKALPPMVERRVEVTKLQYELQGRCYDVEYALSAV 79
E + E + + + A L+E R+AL ER+ + Q E + + + A A
Sbjct: 345 EELMERLKQIEEQTKKAQQELEEQTRRALELEQERK----RAQSEAEKLAKERQEAEEAK 400
Query: 80 KSMDGAATSFKNIQEMLK-QCIFLKQQLKYEESRRNKKDSNSV 121
+++ A+ K QE L + L ++ E R KK+S +V
Sbjct: 401 EALLQASRDQKKTQEQLALEMAELTARISQLEMARQKKESEAV 443
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.317 0.129 0.352
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,847,765
Number of Sequences: 224733
Number of extensions: 691081
Number of successful extensions: 1799
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1795
Number of HSP's gapped (non-prelim): 25
length of query: 171
length of database: 73,234,838
effective HSP length: 85
effective length of query: 86
effective length of database: 54,132,533
effective search space: 4655397838
effective search space used: 4655397838
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)
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