SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002560-TA|BGIBMGA002560-PA|undefined
         (171 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC010931-1|AAH10931.1|  119|Homo sapiens MEF2B protein protein.        87   2e-17
BC004449-1|AAH04449.1|  109|Homo sapiens MEF2B protein protein.        87   2e-17
M77830-1|AAA85135.1| 2871|Homo sapiens desmoplakin I protein.          31   2.7  
AL031058-1|CAA19927.1| 2871|Homo sapiens desmoplakin protein.          31   2.7  
AB209992-1|BAE06074.1| 2319|Homo sapiens DSP variant protein pro...    31   2.7  
Z98946-1|CAB46379.1|  577|Homo sapiens moesin protein.                 30   3.6  
M69066-1|AAA36322.1|  577|Homo sapiens moesin B protein.               30   3.6  
BC017293-1|AAH17293.1|  577|Homo sapiens moesin protein.               30   3.6  
BC017186-1|AAH17186.1|  331|Homo sapiens coiled-coil domain cont...    30   3.6  
AL591507-1|CAI39952.1|  983|Homo sapiens RP3-398G3.1 protein.          30   3.6  
AL049548-1|CAI42743.1|  983|Homo sapiens RP3-398G3.1 protein.          30   3.6  
AK222661-1|BAD96381.1|  331|Homo sapiens limkain beta 2 variant ...    30   3.6  
AK026124-1|BAB15366.1|  331|Homo sapiens osaminidase mRNA.  prot...    30   3.6  
AF535142-1|AAN03486.1| 8749|Homo sapiens enaptin protein.              30   3.6  
AF495910-1|AAN60442.1| 8797|Homo sapiens nesprin-1 protein.            30   3.6  
AB015292-1|BAB82436.1|  331|Homo sapiens limkain beta 2 protein.       30   3.6  
Z38133-1|CAA86293.1| 1937|Homo sapiens Myosin protein.                 29   8.3  
AF295356-1|AAK71522.1|  527|Homo sapiens moesin/anaplastic lymph...    29   8.3  

>BC010931-1|AAH10931.1|  119|Homo sapiens MEF2B protein protein.
          Length = 119

 Score = 87.4 bits (207), Expect = 2e-17
 Identities = 35/99 (35%), Positives = 69/99 (69%)

Query: 8   DAELETXXXXXXERISENMHIVANEPSLALYRLQEHVRKALPPMVERRVEVTKLQYELQG 67
           + E++       ++ +E+++++ANEPS+ALYRLQEHVR++LP + + + ++ + + + QG
Sbjct: 3   EPEMQLKGKKVTDKFTESVYVLANEPSVALYRLQEHVRRSLPELAQHKADMQRWEEQSQG 62

Query: 68  RCYDVEYALSAVKSMDGAATSFKNIQEMLKQCIFLKQQL 106
             Y VEYA SAVK++  ++  F++++ +LKQ I ++  +
Sbjct: 63  AIYTVEYACSAVKNLVDSSVYFRSVEGLLKQAISIRDHM 101


>BC004449-1|AAH04449.1|  109|Homo sapiens MEF2B protein protein.
          Length = 109

 Score = 87.4 bits (207), Expect = 2e-17
 Identities = 35/99 (35%), Positives = 69/99 (69%)

Query: 8   DAELETXXXXXXERISENMHIVANEPSLALYRLQEHVRKALPPMVERRVEVTKLQYELQG 67
           + E++       ++ +E+++++ANEPS+ALYRLQEHVR++LP + + + ++ + + + QG
Sbjct: 3   EPEMQLKGKKVTDKFTESVYVLANEPSVALYRLQEHVRRSLPELAQHKADMQRWEEQSQG 62

Query: 68  RCYDVEYALSAVKSMDGAATSFKNIQEMLKQCIFLKQQL 106
             Y VEYA SAVK++  ++  F++++ +LKQ I ++  +
Sbjct: 63  AIYTVEYACSAVKNLVDSSVYFRSVEGLLKQAISIRDHM 101


>M77830-1|AAA85135.1| 2871|Homo sapiens desmoplakin I protein.
          Length = 2871

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 25/106 (23%), Positives = 51/106 (48%), Gaps = 8/106 (7%)

Query: 58  VTKLQYELQGRCYDVEYALSAVKSMDGAATSFKNIQEMLKQCIFLKQQLKYEESRRNKKD 117
           VT  +    G C DV +     K ++    + K    ML +   +++Q+++ E R   K+
Sbjct: 635 VTTTEITHHGTCQDVNHN----KVIETNRENDKQETWMLMELQKIRRQIEHCEGRMTLKN 690

Query: 118 SNSVYKRLSAHIVLDLPDL----SEFSMVRETTNRIENMMAHARGS 159
                +  S HI + + +L    ++   + E  N++++M+A+ RGS
Sbjct: 691 LPLADQGSSHHITVKINELKSVQNDSQAIAEVLNQLKDMLANFRGS 736


>AL031058-1|CAA19927.1| 2871|Homo sapiens desmoplakin protein.
          Length = 2871

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 25/106 (23%), Positives = 51/106 (48%), Gaps = 8/106 (7%)

Query: 58  VTKLQYELQGRCYDVEYALSAVKSMDGAATSFKNIQEMLKQCIFLKQQLKYEESRRNKKD 117
           VT  +    G C DV +     K ++    + K    ML +   +++Q+++ E R   K+
Sbjct: 635 VTTTEITHHGTCQDVNHN----KVIETNRENDKQETWMLMELQKIRRQIEHCEGRMTLKN 690

Query: 118 SNSVYKRLSAHIVLDLPDL----SEFSMVRETTNRIENMMAHARGS 159
                +  S HI + + +L    ++   + E  N++++M+A+ RGS
Sbjct: 691 LPLADQGSSHHITVKINELKSVQNDSQAIAEVLNQLKDMLANFRGS 736


>AB209992-1|BAE06074.1| 2319|Homo sapiens DSP variant protein
           protein.
          Length = 2319

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 25/106 (23%), Positives = 51/106 (48%), Gaps = 8/106 (7%)

Query: 58  VTKLQYELQGRCYDVEYALSAVKSMDGAATSFKNIQEMLKQCIFLKQQLKYEESRRNKKD 117
           VT  +    G C DV +     K ++    + K    ML +   +++Q+++ E R   K+
Sbjct: 682 VTTTEITHHGTCQDVNHN----KVIETNRENDKQETWMLMELQKIRRQIEHCEGRMTLKN 737

Query: 118 SNSVYKRLSAHIVLDLPDL----SEFSMVRETTNRIENMMAHARGS 159
                +  S HI + + +L    ++   + E  N++++M+A+ RGS
Sbjct: 738 LPLADQGSSHHITVKINELKSVQNDSQAIAEVLNQLKDMLANFRGS 783


>Z98946-1|CAB46379.1|  577|Homo sapiens moesin protein.
          Length = 577

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 5/112 (4%)

Query: 20  ERISENMHIVANEPSLALYRLQEHVRKALPPMVERRVEVTKLQYELQGRCYDVEYALSAV 79
           E + E +  +  +   A   L+E  R+AL    ER+    + Q E +    + + A  A 
Sbjct: 345 EELMERLKQIEEQTKKAQQELEEQTRRALELEQERK----RAQSEAEKLAKERQEAEEAK 400

Query: 80  KSMDGAATSFKNIQEMLK-QCIFLKQQLKYEESRRNKKDSNSVYKRLSAHIV 130
           +++  A+   K  QE L  +   L  ++   E  R KK+S +V  +  A +V
Sbjct: 401 EALLQASRDQKKTQEQLALEMAELTARISQLEMARQKKESEAVEWQQKAQMV 452


>M69066-1|AAA36322.1|  577|Homo sapiens moesin B protein.
          Length = 577

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 5/112 (4%)

Query: 20  ERISENMHIVANEPSLALYRLQEHVRKALPPMVERRVEVTKLQYELQGRCYDVEYALSAV 79
           E + E +  +  +   A   L+E  R+AL    ER+    + Q E +    + + A  A 
Sbjct: 345 EELMERLKQIEEQTKKAQQELEEQTRRALELEQERK----RAQSEAEKLAKERQEAEEAK 400

Query: 80  KSMDGAATSFKNIQEMLK-QCIFLKQQLKYEESRRNKKDSNSVYKRLSAHIV 130
           +++  A+   K  QE L  +   L  ++   E  R KK+S +V  +  A +V
Sbjct: 401 EALLQASRDQKKTQEQLALEMAELTARISQLEMARQKKESEAVEWQQKAQMV 452


>BC017293-1|AAH17293.1|  577|Homo sapiens moesin protein.
          Length = 577

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 5/112 (4%)

Query: 20  ERISENMHIVANEPSLALYRLQEHVRKALPPMVERRVEVTKLQYELQGRCYDVEYALSAV 79
           E + E +  +  +   A   L+E  R+AL    ER+    + Q E +    + + A  A 
Sbjct: 345 EELMERLKQIEEQTKKAQQELEEQTRRALELEQERK----RAQSEAEKLAKERQEAEEAK 400

Query: 80  KSMDGAATSFKNIQEMLK-QCIFLKQQLKYEESRRNKKDSNSVYKRLSAHIV 130
           +++  A+   K  QE L  +   L  ++   E  R KK+S +V  +  A +V
Sbjct: 401 EALLQASRDQKKTQEQLALEMAELTARISQLEMARQKKESEAVEWQQKAQMV 452


>BC017186-1|AAH17186.1|  331|Homo sapiens coiled-coil domain
           containing 92 protein.
          Length = 331

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 65  LQGRCYDVEYALSAVKSMDGAATSFKNIQEMLKQCIFLKQQLKYEES 111
           LQ  C D+ Y L+ VKS +          E+ K+C  L+ QLK +E+
Sbjct: 55  LQQHCTDLTYELT-VKSSEQTGDGTSKSSELKKRCEELEAQLKVKEN 100


>AL591507-1|CAI39952.1|  983|Homo sapiens RP3-398G3.1 protein.
          Length = 983

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 2/83 (2%)

Query: 57  EVTKLQYELQGRCYDVEYALSAVKSMDGAATSFKNIQEMLKQCIFLKQQLKYEESRRNKK 116
           E  K+  E    C  +E   SA+ +   +A    N    +++   L+QQ  YE+  R  K
Sbjct: 845 ETYKVLQEHMDLCQALESLSSAITAFSASARKVVNRDSCVQEAAALQQQ--YEDILRRAK 902

Query: 117 DSNSVYKRLSAHIVLDLPDLSEF 139
           +  +  + L AH      +LS F
Sbjct: 903 ERQTALENLLAHWQRLEKELSSF 925


>AL049548-1|CAI42743.1|  983|Homo sapiens RP3-398G3.1 protein.
          Length = 983

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 2/83 (2%)

Query: 57  EVTKLQYELQGRCYDVEYALSAVKSMDGAATSFKNIQEMLKQCIFLKQQLKYEESRRNKK 116
           E  K+  E    C  +E   SA+ +   +A    N    +++   L+QQ  YE+  R  K
Sbjct: 845 ETYKVLQEHMDLCQALESLSSAITAFSASARKVVNRDSCVQEAAALQQQ--YEDILRRAK 902

Query: 117 DSNSVYKRLSAHIVLDLPDLSEF 139
           +  +  + L AH      +LS F
Sbjct: 903 ERQTALENLLAHWQRLEKELSSF 925


>AK222661-1|BAD96381.1|  331|Homo sapiens limkain beta 2 variant
           protein.
          Length = 331

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 65  LQGRCYDVEYALSAVKSMDGAATSFKNIQEMLKQCIFLKQQLKYEES 111
           LQ  C D+ Y L+ VKS +          E+ K+C  L+ QLK +E+
Sbjct: 55  LQQHCTDLTYELT-VKSSEQTGDGTSKSSELKKRCEELEAQLKVKEN 100


>AK026124-1|BAB15366.1|  331|Homo sapiens osaminidase mRNA.
           protein.
          Length = 331

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 65  LQGRCYDVEYALSAVKSMDGAATSFKNIQEMLKQCIFLKQQLKYEES 111
           LQ  C D+ Y L+ VKS +          E+ K+C  L+ QLK +E+
Sbjct: 55  LQQHCTDLTYELT-VKSSEQTGDGTSKSSELKKRCEELEAQLKVKEN 100


>AF535142-1|AAN03486.1| 8749|Homo sapiens enaptin protein.
          Length = 8749

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 2/83 (2%)

Query: 57   EVTKLQYELQGRCYDVEYALSAVKSMDGAATSFKNIQEMLKQCIFLKQQLKYEESRRNKK 116
            E  K+  E    C  +E   SA+ +   +A    N    +++   L+QQ  YE+  R  K
Sbjct: 1594 ETYKVLQEHMDLCQALESLSSAITAFSASARKVVNRDSCVQEAAALQQQ--YEDILRRAK 1651

Query: 117  DSNSVYKRLSAHIVLDLPDLSEF 139
            +  +  + L AH      +LS F
Sbjct: 1652 ERQTALENLLAHWQRLEKELSSF 1674


>AF495910-1|AAN60442.1| 8797|Homo sapiens nesprin-1 protein.
          Length = 8797

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 2/83 (2%)

Query: 57   EVTKLQYELQGRCYDVEYALSAVKSMDGAATSFKNIQEMLKQCIFLKQQLKYEESRRNKK 116
            E  K+  E    C  +E   SA+ +   +A    N    +++   L+QQ  YE+  R  K
Sbjct: 1587 ETYKVLQEHMDLCQALESLSSAITAFSASARKVVNRDSCVQEAAALQQQ--YEDILRRAK 1644

Query: 117  DSNSVYKRLSAHIVLDLPDLSEF 139
            +  +  + L AH      +LS F
Sbjct: 1645 ERQTALENLLAHWQRLEKELSSF 1667


>AB015292-1|BAB82436.1|  331|Homo sapiens limkain beta 2 protein.
          Length = 331

 Score = 30.3 bits (65), Expect = 3.6
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 65  LQGRCYDVEYALSAVKSMDGAATSFKNIQEMLKQCIFLKQQLKYEES 111
           LQ  C D+ Y L+ VKS +          E+ K+C  L+ QLK +E+
Sbjct: 55  LQQHCTDLTYELT-VKSSEQTGDGTSKSSELKKRCEELEAQLKVKEN 100


>Z38133-1|CAA86293.1| 1937|Homo sapiens Myosin protein.
          Length = 1937

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 13/148 (8%)

Query: 4    VYQGDAELETXXXXXXERISENMHIVANEPSLALYRLQEHVRKALPPMVERRVEVTKLQY 63
            V Q   + ET      E + E    +A      L   +EHV               +LQ 
Sbjct: 1371 VAQWRTKYETDAIQRTEELEEAKKKLAQR----LQEAEEHVEAVNAKCASLEKTKQRLQN 1426

Query: 64   ELQGRCYDVEYALSAVKSMDGAATSFKNIQEMLKQCIFLKQQLKYEESRRNKKDSNSVYK 123
            E++    DVE + +A  ++D    +F  +    KQ        KYEE++   + S    +
Sbjct: 1427 EVEDLMLDVERSNAACAALDKKQRNFDKVLSEWKQ--------KYEETQAELEASQKESR 1478

Query: 124  RLSAHIVLDLPDLSEFSMVRETTNRIEN 151
             LS  +   + ++ E S+ +  T R EN
Sbjct: 1479 SLSTEL-FKVKNVYEESLDQLETLRREN 1505


>AF295356-1|AAK71522.1|  527|Homo sapiens moesin/anaplastic lymphoma
           kinase fusion protein protein.
          Length = 527

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 26/103 (25%), Positives = 46/103 (44%), Gaps = 5/103 (4%)

Query: 20  ERISENMHIVANEPSLALYRLQEHVRKALPPMVERRVEVTKLQYELQGRCYDVEYALSAV 79
           E + E +  +  +   A   L+E  R+AL    ER+    + Q E +    + + A  A 
Sbjct: 345 EELMERLKQIEEQTKKAQQELEEQTRRALELEQERK----RAQSEAEKLAKERQEAEEAK 400

Query: 80  KSMDGAATSFKNIQEMLK-QCIFLKQQLKYEESRRNKKDSNSV 121
           +++  A+   K  QE L  +   L  ++   E  R KK+S +V
Sbjct: 401 EALLQASRDQKKTQEQLALEMAELTARISQLEMARQKKESEAV 443


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.317    0.129    0.352 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,847,765
Number of Sequences: 224733
Number of extensions: 691081
Number of successful extensions: 1799
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1795
Number of HSP's gapped (non-prelim): 25
length of query: 171
length of database: 73,234,838
effective HSP length: 85
effective length of query: 86
effective length of database: 54,132,533
effective search space: 4655397838
effective search space used: 4655397838
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 62 (29.1 bits)

- SilkBase 1999-2023 -