Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002560-TA|BGIBMGA002560-PA|undefined
(171 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81569-1|CAB04601.2| 151|Caenorhabditis elegans Hypothetical pr... 99 2e-21
U39848-7|AAA80693.3| 230|Caenorhabditis elegans Hypothetical pr... 34 0.062
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 33 0.14
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 33 0.14
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 32 0.19
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 32 0.19
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 32 0.19
U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical pr... 30 0.76
U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical pr... 30 0.76
U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical pr... 30 0.76
Z72516-3|CAA96688.2| 1322|Caenorhabditis elegans Hypothetical pr... 29 1.8
AY874871-1|AAX62732.1| 1322|Caenorhabditis elegans chitin syntha... 29 1.8
U41994-13|AAK31527.2| 1425|Caenorhabditis elegans Neuronal symme... 28 3.1
AF014939-3|AAB63927.1| 831|Caenorhabditis elegans Hypothetical ... 28 4.0
AC025723-5|AAK29936.2| 183|Caenorhabditis elegans Hypothetical ... 28 4.0
U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical pr... 27 5.3
U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical pr... 27 5.3
AF099913-6|AAC68748.2| 203|Caenorhabditis elegans Hypothetical ... 27 5.3
Z99279-6|CAB16498.1| 640|Caenorhabditis elegans Hypothetical pr... 27 7.1
Z82284-8|CAB05294.1| 640|Caenorhabditis elegans Hypothetical pr... 27 7.1
AL032630-8|CAA21564.1| 170|Caenorhabditis elegans Hypothetical ... 27 7.1
Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical pr... 27 9.3
AF150086-1|AAD39993.1| 83|Caenorhabditis elegans small zinc fi... 27 9.3
AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric c... 27 9.3
>Z81569-1|CAB04601.2| 151|Caenorhabditis elegans Hypothetical
protein K11B4.2 protein.
Length = 151
Score = 98.7 bits (235), Expect = 2e-21
Identities = 46/111 (41%), Positives = 70/111 (63%)
Query: 10 ELETXXXXXXERISENMHIVANEPSLALYRLQEHVRKALPPMVERRVEVTKLQYELQGRC 69
E+E+ ERI E++ ++ NEPSLALYRLQEH ++LP +V RR+ +T+ L G
Sbjct: 13 EIESRSRIISERICESVRLLDNEPSLALYRLQEHTVRSLPGLVNRRIMLTQQSATLSGAQ 72
Query: 70 YDVEYALSAVKSMDGAATSFKNIQEMLKQCIFLKQQLKYEESRRNKKDSNS 120
+D+E LS SM A ++F N E+L+ C+F KQQL ++ +R+ + S
Sbjct: 73 FDLENTLSTTTSMQNATSAFDNCIELLRNCMFYKQQLDFDSTRKATSSAES 123
>U39848-7|AAA80693.3| 230|Caenorhabditis elegans Hypothetical
protein B0286.1 protein.
Length = 230
Score = 33.9 bits (74), Expect = 0.062
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 40 LQEHVRKALPPMVERRVEVTKLQYELQGRCYDVEYALSAVKSMD----GAATSFKNIQEM 95
LQ+ AL + + K++ ELQ R + LS +K + G T + Q+
Sbjct: 2 LQKEHASALEKLRVIWLHKKKIEAELQSRHAESTKFLSKIKLKESEIYGLKTKQETCQKE 61
Query: 96 LKQCIFLKQQLKYEESRRNKKDSNS 120
L C LK++ K ++ NK D NS
Sbjct: 62 LTDCQTLKEEPKEQKKENNKNDENS 86
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 32.7 bits (71), Expect = 0.14
Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 10/139 (7%)
Query: 39 RLQEHVRKALPPMVERRVEVTKLQYELQGRCYDVEYALSAVKSMDGAATS----FKNIQE 94
+LQE K L E + E+ K +E Q + +KS + T+ +N+ E
Sbjct: 610 QLQEDQTKFLGSHDETKAEMMKDLHEAQDEIEKLTNQAGQLKSKNETLTTELEDSQNLCE 669
Query: 95 MLKQCIFLKQQLKYEESRRNKKDSNSVYKRLSAHIVLDLPDLSEFS-MVRETTNRIENMM 153
LK + K KYEE++ +++ + RL A +L S+FS M +E+ +E ++
Sbjct: 670 RLK-AQYEKADKKYEETKVQLREAEDLADRLQAAQILSGNVESKFSDMQKESKIEMERIL 728
Query: 154 AHARGS----SAELHRSHT 168
+ EL +SHT
Sbjct: 729 DNHNKELEKLREELKKSHT 747
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 32.7 bits (71), Expect = 0.14
Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 10/139 (7%)
Query: 39 RLQEHVRKALPPMVERRVEVTKLQYELQGRCYDVEYALSAVKSMDGAATS----FKNIQE 94
+LQE K L E + E+ K +E Q + +KS + T+ +N+ E
Sbjct: 610 QLQEDQTKFLGSHDETKAEMMKDLHEAQDEIEKLTNQAGQLKSKNETLTTELEDSQNLCE 669
Query: 95 MLKQCIFLKQQLKYEESRRNKKDSNSVYKRLSAHIVLDLPDLSEFS-MVRETTNRIENMM 153
LK + K KYEE++ +++ + RL A +L S+FS M +E+ +E ++
Sbjct: 670 RLK-AQYEKADKKYEETKVQLREAEDLADRLQAAQILSGNVESKFSDMQKESKIEMERIL 728
Query: 154 AHARGS----SAELHRSHT 168
+ EL +SHT
Sbjct: 729 DNHNKELEKLREELKKSHT 747
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 32.3 bits (70), Expect = 0.19
Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 24/182 (13%)
Query: 9 AELETXXXXXXERISENMHIVANEPSLALYRLQEHVRKALPPMVERRVEVTKLQ------ 62
A+LE E + E M + NE +AL K L R VE+ K +
Sbjct: 905 AQLEASKGSTRE-VEERMTAM-NEQKVALEGKLADASKKLEVEEARAVEINKQKKLVEAE 962
Query: 63 -YELQGRCYDVEYALSAVKSMDGAAT-SFKNIQEMLKQ----CIFLKQQLKYEESRRNK- 115
+L+ C DV+ +L V++ A + +Q+ ++Q L ++ K +E + K
Sbjct: 963 CADLKKNCQDVDLSLRKVEAEKNAKEHQIRALQDEMRQQDENISKLNKERKNQEEQNKKL 1022
Query: 116 -------KDSNSVYKRLSAHIVLDLPDLSEFSMVRETTNRIENMMAHARGSSAELHRSHT 168
++ N +L A ++ L D SE +M RE NR + M + R + EL +
Sbjct: 1023 TEDLQAAEEQNLAANKLKAKLMQSLED-SEQTMEREKRNRAD-MDKNKRKAEGELKIAQE 1080
Query: 169 TL 170
TL
Sbjct: 1081 TL 1082
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 32.3 bits (70), Expect = 0.19
Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 24/182 (13%)
Query: 9 AELETXXXXXXERISENMHIVANEPSLALYRLQEHVRKALPPMVERRVEVTKLQ------ 62
A+LE E + E M + NE +AL K L R VE+ K +
Sbjct: 905 AQLEASKGSTRE-VEERMTAM-NEQKVALEGKLADASKKLEVEEARAVEINKQKKLVEAE 962
Query: 63 -YELQGRCYDVEYALSAVKSMDGAAT-SFKNIQEMLKQ----CIFLKQQLKYEESRRNK- 115
+L+ C DV+ +L V++ A + +Q+ ++Q L ++ K +E + K
Sbjct: 963 CADLKKNCQDVDLSLRKVEAEKNAKEHQIRALQDEMRQQDENISKLNKERKNQEEQNKKL 1022
Query: 116 -------KDSNSVYKRLSAHIVLDLPDLSEFSMVRETTNRIENMMAHARGSSAELHRSHT 168
++ N +L A ++ L D SE +M RE NR + M + R + EL +
Sbjct: 1023 TEDLQAAEEQNLAANKLKAKLMQSLED-SEQTMEREKRNRAD-MDKNKRKAEGELKIAQE 1080
Query: 169 TL 170
TL
Sbjct: 1081 TL 1082
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain 2
protein.
Length = 1947
Score = 32.3 bits (70), Expect = 0.19
Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 24/182 (13%)
Query: 9 AELETXXXXXXERISENMHIVANEPSLALYRLQEHVRKALPPMVERRVEVTKLQ------ 62
A+LE E + E M + NE +AL K L R VE+ K +
Sbjct: 905 AQLEASKGSTRE-VEERMTAM-NEQKVALEGKLADASKKLEVEEARAVEINKQKKLVEAE 962
Query: 63 -YELQGRCYDVEYALSAVKSMDGAAT-SFKNIQEMLKQ----CIFLKQQLKYEESRRNK- 115
+L+ C DV+ +L V++ A + +Q+ ++Q L ++ K +E + K
Sbjct: 963 CADLKKNCQDVDLSLRKVEAEKNAKEHQIRALQDEMRQQDENISKLNKERKNQEEQNKKL 1022
Query: 116 -------KDSNSVYKRLSAHIVLDLPDLSEFSMVRETTNRIENMMAHARGSSAELHRSHT 168
++ N +L A ++ L D SE +M RE NR + M + R + EL +
Sbjct: 1023 TEDLQAAEEQNLAANKLKAKLMQSLED-SEQTMEREKRNRAD-MDKNKRKAEGELKIAQE 1080
Query: 169 TL 170
TL
Sbjct: 1081 TL 1082
>U23452-4|ABE73334.1| 1316|Caenorhabditis elegans Hypothetical
protein R07G3.3c protein.
Length = 1316
Score = 30.3 bits (65), Expect = 0.76
Identities = 27/113 (23%), Positives = 54/113 (47%), Gaps = 10/113 (8%)
Query: 21 RISENMHIVANEPSLALYRLQEHVRKALPPMVERRVEVTKLQYELQGRCYDVEYALSAVK 80
R+S+ + NE L RL++ + A + E+ +VT+ + EL D+ L+++
Sbjct: 801 RLSDQLTHTKNESKLVQQRLEKELEIARQRLSEKETQVTRDEMELA----DLRSKLASMH 856
Query: 81 SM-DGAATSFKNIQEMLKQCIFLKQQLKYEES-----RRNKKDSNSVYKRLSA 127
S G+ S + ++ + LK + ++ ES +R +S + KR+ A
Sbjct: 857 SQYTGSDASGMTPDRLKREYMQLKTRTQFLESELDDAKRKLLESETTQKRMDA 909
>U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical
protein R07G3.3a protein.
Length = 1982
Score = 30.3 bits (65), Expect = 0.76
Identities = 27/113 (23%), Positives = 54/113 (47%), Gaps = 10/113 (8%)
Query: 21 RISENMHIVANEPSLALYRLQEHVRKALPPMVERRVEVTKLQYELQGRCYDVEYALSAVK 80
R+S+ + NE L RL++ + A + E+ +VT+ + EL D+ L+++
Sbjct: 801 RLSDQLTHTKNESKLVQQRLEKELEIARQRLSEKETQVTRDEMELA----DLRSKLASMH 856
Query: 81 SM-DGAATSFKNIQEMLKQCIFLKQQLKYEES-----RRNKKDSNSVYKRLSA 127
S G+ S + ++ + LK + ++ ES +R +S + KR+ A
Sbjct: 857 SQYTGSDASGMTPDRLKREYMQLKTRTQFLESELDDAKRKLLESETTQKRMDA 909
>U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical
protein R07G3.3b protein.
Length = 1987
Score = 30.3 bits (65), Expect = 0.76
Identities = 27/113 (23%), Positives = 54/113 (47%), Gaps = 10/113 (8%)
Query: 21 RISENMHIVANEPSLALYRLQEHVRKALPPMVERRVEVTKLQYELQGRCYDVEYALSAVK 80
R+S+ + NE L RL++ + A + E+ +VT+ + EL D+ L+++
Sbjct: 801 RLSDQLTHTKNESKLVQQRLEKELEIARQRLSEKETQVTRDEMELA----DLRSKLASMH 856
Query: 81 SM-DGAATSFKNIQEMLKQCIFLKQQLKYEES-----RRNKKDSNSVYKRLSA 127
S G+ S + ++ + LK + ++ ES +R +S + KR+ A
Sbjct: 857 SQYTGSDASGMTPDRLKREYMQLKTRTQFLESELDDAKRKLLESETTQKRMDA 909
>Z72516-3|CAA96688.2| 1322|Caenorhabditis elegans Hypothetical
protein T25G3.2 protein.
Length = 1322
Score = 29.1 bits (62), Expect = 1.8
Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 13/155 (8%)
Query: 5 YQGDAELETXXXXXXERISENMHIVAN----EPSLALYRLQEHVRKALPPMVERRVEVTK 60
Y+G + E I +M V N E SL ++ Q + + M+ +++
Sbjct: 414 YRGWRLVRQRYFDTNEEIISSMPPVCNGLCIEQSLVVF--QHSLNRQEKTMLTEEEDISD 471
Query: 61 LQYELQGRCYDVEYALSAVKSMDGAATSFKNIQEMLKQCIFLKQQLKYEESRR-NKKDSN 119
EL+ R +V+ V ++ G AT + + ++Q + +L + + R N K +N
Sbjct: 472 ENDELRIRNDEVD----RVSTVYGCATMWHETETEMRQVLRSILKLDVDHATRMNNKKAN 527
Query: 120 SVYKRLSAHIVLD--LPDLSEFSMVRETTNRIENM 152
+ RL HI D D+ E + + N NM
Sbjct: 528 ELRYRLEGHIFFDDAWEDVEEDGIEKRQPNEYFNM 562
>AY874871-1|AAX62732.1| 1322|Caenorhabditis elegans chitin synthase
1 protein.
Length = 1322
Score = 29.1 bits (62), Expect = 1.8
Identities = 36/155 (23%), Positives = 65/155 (41%), Gaps = 13/155 (8%)
Query: 5 YQGDAELETXXXXXXERISENMHIVAN----EPSLALYRLQEHVRKALPPMVERRVEVTK 60
Y+G + E I +M V N E SL ++ Q + + M+ +++
Sbjct: 414 YRGWRLVRQRYFDTNEEIISSMPPVCNGLCIEQSLVVF--QHSLNRQEKTMLTEEEDISD 471
Query: 61 LQYELQGRCYDVEYALSAVKSMDGAATSFKNIQEMLKQCIFLKQQLKYEESRR-NKKDSN 119
EL+ R +V+ V ++ G AT + + ++Q + +L + + R N K +N
Sbjct: 472 ENDELRIRNDEVD----RVSTVYGCATMWHETETEMRQVLRSILKLDVDHATRMNNKKAN 527
Query: 120 SVYKRLSAHIVLD--LPDLSEFSMVRETTNRIENM 152
+ RL HI D D+ E + + N NM
Sbjct: 528 ELRYRLEGHIFFDDAWEDVEEDGIEKRQPNEYFNM 562
>U41994-13|AAK31527.2| 1425|Caenorhabditis elegans Neuronal symmetry
protein 1 protein.
Length = 1425
Score = 28.3 bits (60), Expect = 3.1
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 6 QGDAELETXXXXXXERISEN---MHIVANEPSLALYRLQEHVRKALPPMVERRVEVTKLQ 62
+G+A +E+ ER+ E+ + + E + + RL + + +PP E +VT++Q
Sbjct: 1265 EGEALIESRPPSREERVREDRKELRTLQEENEILIERLLQKI--IMPPGTENNYQVTRVQ 1322
Query: 63 YEL 65
EL
Sbjct: 1323 EEL 1325
>AF014939-3|AAB63927.1| 831|Caenorhabditis elegans Hypothetical
protein ZC132.4 protein.
Length = 831
Score = 27.9 bits (59), Expect = 4.0
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 86 ATSFKNIQEMLKQCIFLKQQLKYEESRRNKKDSNSVYKRLSAHIVLDLPDLSE 138
+TS K ++ K CI K + + RNK + N + + H +D+ L E
Sbjct: 450 STSAKFKKQKFKMCIKTKNKHQLFSETRNKLNMNPAAQAVDQHDAMDIEILEE 502
>AC025723-5|AAK29936.2| 183|Caenorhabditis elegans Hypothetical
protein Y54F10AM.5 protein.
Length = 183
Score = 27.9 bits (59), Expect = 4.0
Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 3/91 (3%)
Query: 31 NEPSLALYRLQEHV-RKALPPMVERRVEVT--KLQYELQGRCYDVEYALSAVKSMDGAAT 87
++ S LY + H +K L VE + +T KL Y + YD A VK D A
Sbjct: 93 DQSSAKLYMSKCHDDQKELDACVEANLNLTRPKLGYFSKLHVYDSATAAPEVKLRDYKAE 152
Query: 88 SFKNIQEMLKQCIFLKQQLKYEESRRNKKDS 118
+ K + E+ K KY + R N +S
Sbjct: 153 AAKVLNELPADYHLRKDYRKYNDWRYNITES 183
>U39649-3|AAM69070.1| 1538|Caenorhabditis elegans Hypothetical
protein T23F2.2b protein.
Length = 1538
Score = 27.5 bits (58), Expect = 5.3
Identities = 10/35 (28%), Positives = 23/35 (65%)
Query: 26 MHIVANEPSLALYRLQEHVRKALPPMVERRVEVTK 60
+ IVA + + + +L+E+++K + P+ E + VT+
Sbjct: 412 LEIVAKDQLVKIQQLEEYLQKVMEPVPESHITVTE 446
>U39649-2|AAM69069.1| 1534|Caenorhabditis elegans Hypothetical
protein T23F2.2a protein.
Length = 1534
Score = 27.5 bits (58), Expect = 5.3
Identities = 10/35 (28%), Positives = 23/35 (65%)
Query: 26 MHIVANEPSLALYRLQEHVRKALPPMVERRVEVTK 60
+ IVA + + + +L+E+++K + P+ E + VT+
Sbjct: 412 LEIVAKDQLVKIQQLEEYLQKVMEPVPESHITVTE 446
>AF099913-6|AAC68748.2| 203|Caenorhabditis elegans Hypothetical
protein C29F9.6 protein.
Length = 203
Score = 27.5 bits (58), Expect = 5.3
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 115 KKDSNSVYKRLSAHIVLDLPDLSEFSMVRETTNRIENMMAHARGSSAELHR 165
K D +V +R+S HI+L ++E E + A GS E +R
Sbjct: 101 KTDREAVIERISKHIMLHPQRFEPIWKIKEDARAAELQIFEAAGSRDEYYR 151
>Z99279-6|CAB16498.1| 640|Caenorhabditis elegans Hypothetical
protein Y57G11A.2 protein.
Length = 640
Score = 27.1 bits (57), Expect = 7.1
Identities = 14/55 (25%), Positives = 26/55 (47%)
Query: 70 YDVEYALSAVKSMDGAATSFKNIQEMLKQCIFLKQQLKYEESRRNKKDSNSVYKR 124
Y+ + + +G A + K QE + + I L + KYE+ + ++ VY R
Sbjct: 223 YETSHKVLVKSKYEGPAAADKTEQEFVAKKIMLSLKKKYEQLEFSTAPADFVYTR 277
>Z82284-8|CAB05294.1| 640|Caenorhabditis elegans Hypothetical
protein Y57G11A.2 protein.
Length = 640
Score = 27.1 bits (57), Expect = 7.1
Identities = 14/55 (25%), Positives = 26/55 (47%)
Query: 70 YDVEYALSAVKSMDGAATSFKNIQEMLKQCIFLKQQLKYEESRRNKKDSNSVYKR 124
Y+ + + +G A + K QE + + I L + KYE+ + ++ VY R
Sbjct: 223 YETSHKVLVKSKYEGPAAADKTEQEFVAKKIMLSLKKKYEQLEFSTAPADFVYTR 277
>AL032630-8|CAA21564.1| 170|Caenorhabditis elegans Hypothetical
protein Y62H9A.8 protein.
Length = 170
Score = 27.1 bits (57), Expect = 7.1
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 110 ESRRNKKDSNSVYKRLSAHIVLDLPDLSEFSMVRET-TNRIENMMAHARGSSAE-LHRSH 167
+S K D + +K +S+ L PD+S+ + ET T+ +N+ + + E +H SH
Sbjct: 84 KSIEKKVDEYNYFKMISSQPQLASPDMSQSPPLLETSTDNSDNITSSEKTVELEIIHDSH 143
Query: 168 TTL 170
L
Sbjct: 144 VEL 146
>Z78416-5|CAB01681.1| 1137|Caenorhabditis elegans Hypothetical
protein C23H4.6 protein.
Length = 1137
Score = 26.6 bits (56), Expect = 9.3
Identities = 32/133 (24%), Positives = 55/133 (41%), Gaps = 10/133 (7%)
Query: 37 LYRLQEHVRKALPPMVERRVEVTKLQYELQGRCYDVEYALSAVKSMDGAATSFKNIQEML 96
L L E + A+ E +LQ E++G ++ +D + KN + L
Sbjct: 783 LDELDEKFQPAIKTKNESEKNYVELQQEVKGYAAQTLSFQKQLRKLDEDGEAGKNRLDKL 842
Query: 97 KQCIFLKQQLKYEESR-RNKKDS--NSVYKRLSA----HIVLDLPDLSEFSMVRETTNRI 149
K + +L ++E+R ++++D N V K D PDLSEF ++ +I
Sbjct: 843 KSN---EDELYHDEARLKSERDEALNIVEKEKVTIERPRREADPPDLSEFPSTKDARKKI 899
Query: 150 ENMMAHARGSSAE 162
M +AE
Sbjct: 900 IEMHKAISRDAAE 912
>AF150086-1|AAD39993.1| 83|Caenorhabditis elegans small zinc
finger-like protein protein.
Length = 83
Score = 26.6 bits (56), Expect = 9.3
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 54 RRVEVTKLQYELQGRCYDVEYA-LSAVKSMDG-AATSFKN-IQEMLKQCIFLKQQL 106
+R + T+ + L GRC+DV +A MDG T F+N + M+ F+ + L
Sbjct: 20 QRQKFTEQVHTLTGRCWDVCFADYRPPSKMDGKTQTCFQNCVNRMIDASNFMVEHL 75
>AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric
chromosome bindingprotein protein 1 protein.
Length = 1475
Score = 26.6 bits (56), Expect = 9.3
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Query: 39 RLQEHVRKALPPMVERRVEVTKLQYELQGRCYD---VEYALSAVKSMDG 84
RLQE +R + + E V+V+ LQ EL+ D V+ + A+KS G
Sbjct: 930 RLQEDLRTSDARVQELNVQVSDLQSELETARQDTNAVQVVMEALKSEQG 978
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.317 0.129 0.352
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,582,177
Number of Sequences: 27539
Number of extensions: 128127
Number of successful extensions: 469
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 458
Number of HSP's gapped (non-prelim): 27
length of query: 171
length of database: 12,573,161
effective HSP length: 77
effective length of query: 94
effective length of database: 10,452,658
effective search space: 982549852
effective search space used: 982549852
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 56 (26.6 bits)
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