Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002559-TA|BGIBMGA002559-PA|IPR000608|Ubiquitin-
conjugating enzyme, E2
(151 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0222 - 27662122-27662159,27662251-27662341,27662760-276628... 136 9e-33
02_01_0154 + 1078561-1078630,1078758-1078885,1079016-1079120,107... 132 9e-32
09_02_0285 + 6894899-6895114,6896197-6896422,6896889-6896992,689... 132 1e-31
04_04_1516 - 34122205-34122348,34122430-34122534,34122878-341230... 131 2e-31
01_06_1150 + 34910941-34911010,34911611-34911738,34912025-349121... 131 2e-31
06_03_0198 - 17797574-17797717,17797995-17798099,17798509-177986... 130 5e-31
01_06_0129 - 26770543-26770720,26774592-26774719,26774829-267749... 123 5e-29
02_02_0339 + 9115297-9115366,9116280-9116407,9117537-9117641,911... 115 2e-26
03_06_0260 - 32717142-32717270,32717743-32717831,32717950-327180... 114 2e-26
01_01_1187 + 9444742-9445317 107 5e-24
01_05_0633 + 23840427-23840562,23840699-23840768,23840846-238409... 105 2e-23
01_07_0028 - 40588611-40588718,40588812-40588901,40589966-405901... 102 1e-22
06_03_1005 + 26837047-26837093,26837644-26837731,26837854-268379... 88 2e-18
02_05_0555 - 29937973-29938395,29938509-29938790 88 3e-18
07_01_0481 - 3621798-3621926,3622572-3622660,3622780-3622933,362... 86 1e-17
10_02_0151 + 5895708-5895736,5896291-5896403,5897956-5898064,589... 81 3e-16
08_02_0468 - 17505905-17506002,17506295-17506424,17506662-175067... 81 4e-16
09_02_0429 + 9306862-9306970,9307834-9307942,9308538-9308616,930... 79 2e-15
07_03_1012 + 23295976-23296264,23296475-23296548,23296972-232969... 77 8e-15
05_05_0110 + 22470869-22470920,22471044-22471146,22473261-224733... 74 6e-14
01_06_1289 - 36010924-36011001,36011441-36011518,36012321-360124... 74 6e-14
02_05_0558 - 29950120-29950319,29951213-29951579,29952067-29952372 71 4e-13
04_04_0902 - 29262611-29262673,29262796-29262909,29262995-292631... 70 9e-13
03_01_0159 + 1298002-1298070,1298181-1298264,1300354-1300506,130... 70 9e-13
10_08_0755 - 20329127-20329189,20329276-20329389,20329465-203296... 69 1e-12
10_08_0197 + 15666873-15666916,15667098-15667177,15667490-156676... 67 7e-12
12_02_1249 - 27331801-27331896,27331984-27332072,27334020-273340... 60 7e-10
05_01_0561 + 4905107-4905272,4905945-4906033,4906832-4906960 60 7e-10
03_02_0755 + 10932897-10933010,10933446-10933577,10933666-109337... 52 3e-07
02_05_0556 - 29940146-29940158,29941060-29941240,29941271-29941670 38 0.005
01_01_0939 - 7404209-7404490,7405057-7405368,7405470-7405609,740... 35 0.024
01_06_0247 + 27851206-27851255,27851382-27851496,27852280-278524... 33 0.13
05_07_0075 - 27513927-27514220,27514806-27515117,27515203-275153... 32 0.23
05_07_0076 - 27520152-27520379,27520785-27521096,27521194-275213... 31 0.40
02_02_0171 - 7427862-7428293 31 0.52
01_06_1014 - 33810112-33811995 28 2.8
05_01_0415 - 3275236-3276244,3276342-3276428,3276829-3277208,327... 27 8.5
04_01_0123 - 1283197-1283292,1283330-1284439,1284790-1285177,128... 27 8.5
>01_06_0222 -
27662122-27662159,27662251-27662341,27662760-27662801,
27663591-27663649,27664300-27664386,27664501-27664528,
27664683-27664718
Length = 126
Score = 136 bits (328), Expect = 9e-33
Identities = 74/145 (51%), Positives = 89/145 (61%), Gaps = 27/145 (18%)
Query: 4 LPRRIIKETQRLMQEPVPGISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYP 63
LPRRIIKETQRL+ EP PGISA PSE N RYF+V++ GP S +YP
Sbjct: 6 LPRRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPAQSPYEGGVFKLELFLPEEYP 65
Query: 64 MSAPKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLAN 123
M+APKVRF+TKIYHPNID+ LLS APNPDDPL++
Sbjct: 66 MAAPKVRFLTKIYHPNIDK---------------------ALLS------APNPDDPLSD 98
Query: 124 DVAELWKVNESEAIRNAKEWTRRYA 148
++A+ WK NE+EA+ AKEWTR YA
Sbjct: 99 NIAKHWKANEAEAVETAKEWTRLYA 123
>02_01_0154 +
1078561-1078630,1078758-1078885,1079016-1079120,
1079228-1079371
Length = 148
Score = 132 bits (320), Expect = 9e-32
Identities = 65/144 (45%), Positives = 85/144 (59%)
Query: 6 RRIIKETQRLMQEPVPGISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMS 65
RRIIKE + L ++P SA P + ++ + GP DS DYP
Sbjct: 4 RRIIKELKDLQRDPPTSCSAGPVSDDMFHWQATIMGPNDSPYSGGVFLVTIHFPPDYPFK 63
Query: 66 APKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDV 125
PKV F TK++HPNI+ G ICLDILKD+WSPAL I VLLSI +LL+ PNPDDPL ++
Sbjct: 64 PPKVAFKTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 123
Query: 126 AELWKVNESEAIRNAKEWTRRYAM 149
A + K + A+ WT++YAM
Sbjct: 124 AHMCKTDRLRYESTARGWTQKYAM 147
>09_02_0285 +
6894899-6895114,6896197-6896422,6896889-6896992,
6897121-6897239,6897445-6897634
Length = 284
Score = 132 bits (319), Expect = 1e-31
Identities = 64/146 (43%), Positives = 85/146 (58%)
Query: 6 RRIIKETQRLMQEPVPGISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMS 65
+RI KE L ++P SA P+ + ++ + GP DS DYP
Sbjct: 4 KRIQKELMDLRKDPPTSCSAGPAGEDLFHWQATIMGPSDSPYAGGVFFVNIHFPPDYPFK 63
Query: 66 APKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDV 125
PKV F TK+YHPNI+ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL ++
Sbjct: 64 PPKVNFQTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSISSLLTDPNPDDPLVPEI 123
Query: 126 AELWKVNESEAIRNAKEWTRRYAMDN 151
A ++K A+ WT++YAM N
Sbjct: 124 AHVYKSQRPRYEETARAWTQKYAMGN 149
>04_04_1516 -
34122205-34122348,34122430-34122534,34122878-34123005,
34124003-34124072
Length = 148
Score = 131 bits (317), Expect = 2e-31
Identities = 62/144 (43%), Positives = 88/144 (61%)
Query: 6 RRIIKETQRLMQEPVPGISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMS 65
+RI+KE + L ++P SA P + ++ + GP DS DYP
Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPSDSPFAGGVFLVNIHFPPDYPFK 63
Query: 66 APKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDV 125
PKV F TK++HPNI+ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL ++
Sbjct: 64 PPKVSFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 123
Query: 126 AELWKVNESEAIRNAKEWTRRYAM 149
A ++K + ++ A+ WT++YAM
Sbjct: 124 AHMYKTDRAKYESTARSWTQKYAM 147
>01_06_1150 +
34910941-34911010,34911611-34911738,34912025-34912129,
34912525-34912668
Length = 148
Score = 131 bits (317), Expect = 2e-31
Identities = 62/144 (43%), Positives = 88/144 (61%)
Query: 6 RRIIKETQRLMQEPVPGISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMS 65
+RI+KE + L ++P SA P+ + ++ + GP DS DYP
Sbjct: 4 KRILKELKDLQKDPPTSCSAGPAGEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFK 63
Query: 66 APKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDV 125
PKV F TK++HPNI+ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL ++
Sbjct: 64 PPKVSFKTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 123
Query: 126 AELWKVNESEAIRNAKEWTRRYAM 149
A ++K + + A+ WT++YAM
Sbjct: 124 AHMYKTDRPKYETTARSWTQKYAM 147
>06_03_0198 -
17797574-17797717,17797995-17798099,17798509-17798636,
17799444-17799513
Length = 148
Score = 130 bits (314), Expect = 5e-31
Identities = 61/144 (42%), Positives = 88/144 (61%)
Query: 6 RRIIKETQRLMQEPVPGISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMS 65
+RI+KE + L ++P SA P + ++ + GP DS DYP
Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPADSPYAGGVFLVSIHFPPDYPFK 63
Query: 66 APKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDV 125
PKV F TK++HPNI+ G ICLDILK++WSPAL + VLLSI +LL+ PNPDDPL ++
Sbjct: 64 PPKVAFKTKVFHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVPEI 123
Query: 126 AELWKVNESEAIRNAKEWTRRYAM 149
A ++K + ++ A+ WT++YAM
Sbjct: 124 AHMYKTDRAKYESTARGWTQKYAM 147
>01_06_0129 -
26770543-26770720,26774592-26774719,26774829-26774933,
26775661-26775788,26777332-26777433,26778760-26778861,
26779777-26779852,26779971-26780059,26780177-26780230,
26780482-26780614,26780671-26780797,26781590-26781648
Length = 426
Score = 123 bits (297), Expect = 5e-29
Identities = 60/140 (42%), Positives = 82/140 (58%)
Query: 6 RRIIKETQRLMQEPVPGISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMS 65
+RI KE + L ++P SA P + ++ + GP DS DYP
Sbjct: 228 KRIQKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFK 287
Query: 66 APKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDV 125
PKV F TK++HPNI+ G ICLDILKD+WSPAL I VLLSI +LL+ PNPDDPL ++
Sbjct: 288 PPKVAFRTKVFHPNINSNGSICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 347
Query: 126 AELWKVNESEAIRNAKEWTR 145
A ++K + + A+ WT+
Sbjct: 348 AHMYKTDRHKYENTARTWTQ 367
>02_02_0339 +
9115297-9115366,9116280-9116407,9117537-9117641,
9118165-9118259,9119472-9119538,9119685-9119720
Length = 166
Score = 115 bits (276), Expect = 2e-26
Identities = 55/130 (42%), Positives = 78/130 (60%)
Query: 6 RRIIKETQRLMQEPVPGISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMS 65
+RI+KE + L ++P SA P + ++ + GP DS DYP
Sbjct: 4 KRILKELKDLQKDPPTSCSAGPVAEDMFHWQATLMGPSDSPYAGGVFLVTIHFPPDYPFK 63
Query: 66 APKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDV 125
PKV TK++HPNI+ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL ++
Sbjct: 64 PPKVALKTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEI 123
Query: 126 AELWKVNESE 135
A ++K + ++
Sbjct: 124 AHMYKTDRAK 133
>03_06_0260 -
32717142-32717270,32717743-32717831,32717950-32718039,
32721571-32721596,32721772-32721896
Length = 152
Score = 114 bits (275), Expect = 2e-26
Identities = 50/137 (36%), Positives = 81/137 (59%)
Query: 6 RRIIKETQRLMQEPVPGISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMS 65
+R++++ +RL Q+P GIS P + N ++ ++ GP+D+ DYP
Sbjct: 7 KRLMRDFKRLQQDPPAGISGAPHDNNIMLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNK 66
Query: 66 APKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDV 125
P VRF+++++HPNI G ICLDIL+++WSP + +L SIQ+LL PNP+ P ++
Sbjct: 67 PPVVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEA 126
Query: 126 AELWKVNESEAIRNAKE 142
A L+ N+ E R +E
Sbjct: 127 ARLFSENKREYNRKVRE 143
>01_01_1187 + 9444742-9445317
Length = 191
Score = 107 bits (256), Expect = 5e-24
Identities = 55/130 (42%), Positives = 68/130 (52%), Gaps = 1/130 (0%)
Query: 6 RRIIKETQRLMQEPVPGISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMS 65
RR+ E LM PG+SA P N + + G + +YP
Sbjct: 50 RRLQSELMALMMGGDPGVSAFPEGDNIFSWVGTIAGSAATAYEGTSYRLSLAFPGEYPYK 109
Query: 66 APKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDV 125
PKVRF T +HPN+D G ICLDIL+DKWS A +RT+LLSIQ+LL PN D PL
Sbjct: 110 PPKVRFETPCFHPNVDAHGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNNDSPLNTQA 169
Query: 126 AELWKVNESE 135
A LW N+ E
Sbjct: 170 AALWP-NQDE 178
>01_05_0633 +
23840427-23840562,23840699-23840768,23840846-23840951,
23841086-23841184,23841320-23841442,23841555-23842691
Length = 556
Score = 105 bits (251), Expect = 2e-23
Identities = 61/156 (39%), Positives = 79/156 (50%), Gaps = 9/156 (5%)
Query: 2 AALPRRIIKETQRLMQEPVPGISAVPSETNARY-----FHVIVTGPEDSXXXXXXXXXXX 56
A L R+ KE + L+ +P G+S S + F + GP+++
Sbjct: 5 ARLNLRMQKEVKLLLNDPPHGVSLNLSGDESALSSLLSFEARIQGPDETVYSKGVFVLKI 64
Query: 57 XXXXDYPMSAPKVRFITKIYHPNIDRLGRICLDIL----KDKWSPALQIRTVLLSIQALL 112
YP P V F+T IYHPNID GRICLDIL K W P+L I TVL SI LL
Sbjct: 65 QIPERYPFQPPNVTFVTPIYHPNIDNGGRICLDILNLPPKGAWQPSLNIATVLTSIGLLL 124
Query: 113 SAPNPDDPLANDVAELWKVNESEAIRNAKEWTRRYA 148
S PNPDD L +++ +K N NA+ WT +YA
Sbjct: 125 SDPNPDDGLMAEISREYKYNRQVFDINARSWTEKYA 160
>01_07_0028 -
40588611-40588718,40588812-40588901,40589966-40590125,
40590547-40590595,40591158-40591338
Length = 195
Score = 102 bits (245), Expect = 1e-22
Identities = 58/148 (39%), Positives = 83/148 (56%), Gaps = 3/148 (2%)
Query: 7 RIIKE-TQRLMQEPVPGIS-AVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPM 64
R+ KE T+ V G+S A+ + + + GP+ + YP
Sbjct: 6 RVQKELTECNRDREVSGVSIALHDGSTISHLTGTIAGPQGTPYEGGTFVIDIRLPGGYPF 65
Query: 65 SAPKVRFITKIYHPNID-RLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLAN 123
PK++FITK++HPNI + G ICLDILKD+WSPAL ++T LLS+QALLSAP PDDP
Sbjct: 66 EPPKMQFITKVWHPNISSQNGAICLDILKDQWSPALTLKTALLSLQALLSAPAPDDPQDA 125
Query: 124 DVAELWKVNESEAIRNAKEWTRRYAMDN 151
VA+ + + S A+ WT +A ++
Sbjct: 126 VVAQQYLRDYSTFSATARYWTEAFAKNS 153
>06_03_1005 +
26837047-26837093,26837644-26837731,26837854-26837998,
26838150-26838227,26838323-26838435,26838538-26838641,
26838804-26839119
Length = 296
Score = 88.2 bits (209), Expect = 2e-18
Identities = 46/144 (31%), Positives = 73/144 (50%)
Query: 6 RRIIKETQRLMQEPVPGISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMS 65
R++ KE + L + P GI + ++ + + GP + D+P S
Sbjct: 57 RQLAKELKSLDESPPEGIKVIVNDDDFTTIFADIEGPAGTPYENGVFRMKLLLSRDFPQS 116
Query: 66 APKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDV 125
PK F+TKI+HPNI G IC++ LK W+P+L +R VLL ++ LL P P+ L
Sbjct: 117 PPKGFFLTKIFHPNIATSGEICVNTLKKDWNPSLGLRHVLLVVRCLLIEPFPESALNEQA 176
Query: 126 AELWKVNESEAIRNAKEWTRRYAM 149
+L N E R+A+ +T +A+
Sbjct: 177 GKLLLENYEEYARHARLYTSIHAL 200
>02_05_0555 - 29937973-29938395,29938509-29938790
Length = 234
Score = 87.8 bits (208), Expect = 3e-18
Identities = 52/149 (34%), Positives = 76/149 (51%), Gaps = 3/149 (2%)
Query: 2 AALPRRIIKETQRLMQEPVPGISAVPSETNARY-FHVIVTGPEDSXXXXXXXXXXXXXXX 60
A RRI +E + +P P PS + + V++ GP +
Sbjct: 21 AVARRRIGRELWQFWLDPPPYCRPGPSPVKDHFHWEVVIDGPAATPYAGGVFPVDVWFPY 80
Query: 61 DYPMSAPKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDP 120
DYP PK+ F TK+YHPNID GR+ LDI +D WSPAL I +LL ++L P D P
Sbjct: 81 DYPFRPPKLFFKTKVYHPNIDGKGRMALDIFQDNWSPALTINKLLLCFVSVLFDPLLDRP 140
Query: 121 LANDVAELWKVNESEAI-RNAKEWTRRYA 148
+A+ +K +E EA A+ WT++++
Sbjct: 141 TNRCIAKQYK-HEYEAYEEKARAWTQKHS 168
>07_01_0481 -
3621798-3621926,3622572-3622660,3622780-3622933,
3624104-3624111,3625522-3625547,3625757-3625881
Length = 176
Score = 86.2 bits (204), Expect = 1e-17
Identities = 37/82 (45%), Positives = 54/82 (65%)
Query: 61 DYPMSAPKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDP 120
DYP P VRF+++++HPNI G ICLDIL+++WSP + +L SIQ+LL PNP+ P
Sbjct: 86 DYPNKPPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSP 145
Query: 121 LANDVAELWKVNESEAIRNAKE 142
++ A L+ N+ E R +E
Sbjct: 146 ANSEAARLFSENKREYNRKVRE 167
Score = 38.7 bits (86), Expect = 0.002
Identities = 13/40 (32%), Positives = 27/40 (67%)
Query: 6 RRIIKETQRLMQEPVPGISAVPSETNARYFHVIVTGPEDS 45
+R++++ +RL Q+P GIS P + N ++ ++ GP+D+
Sbjct: 7 KRLMRDFKRLQQDPPAGISGAPHDNNIMLWNAVIFGPDDT 46
>10_02_0151 +
5895708-5895736,5896291-5896403,5897956-5898064,
5898580-5898658,5898747-5898863,5900001-5900138
Length = 194
Score = 81.4 bits (192), Expect = 3e-16
Identities = 43/135 (31%), Positives = 64/135 (47%), Gaps = 1/135 (0%)
Query: 7 RIIKETQRLMQEPVPGISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMSA 66
R+ K+ L IS + + F +IV P++ YP
Sbjct: 44 RLHKDISELNLPKSTSISFPNGKDDLMNFEIIVR-PDEGYYLGGTFVFTFQVSPSYPHEP 102
Query: 67 PKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVA 126
PKV+ TK+YHPNID G +CL+IL++ W P L I TV+ + L + PN +DPL ++ A
Sbjct: 103 PKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLNLLFTQPNDEDPLNHEAA 162
Query: 127 ELWKVNESEAIRNAK 141
+ + N N K
Sbjct: 163 AVLRDNPKLFEANVK 177
>08_02_0468 -
17505905-17506002,17506295-17506424,17506662-17506778,
17506881-17506959,17507546-17507654,17507857-17507969,
17510510-17510570,17511562-17511742,17512903-17512960,
17514292-17514497,17514582-17514671,17514752-17514813,
17514911-17514979,17515330-17515334,17516282-17516454
Length = 516
Score = 81.0 bits (191), Expect = 4e-16
Identities = 33/80 (41%), Positives = 50/80 (62%)
Query: 62 YPMSAPKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL 121
YP PKV+ TK+YHPNID G +CL+IL++ W P L + T++ + L S PN +DPL
Sbjct: 390 YPHEPPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNVNTIVYGLNLLFSQPNDEDPL 449
Query: 122 ANDVAELWKVNESEAIRNAK 141
++ A + + N + RN +
Sbjct: 450 NHEAAAVLRDNPEKFERNVQ 469
>09_02_0429 +
9306862-9306970,9307834-9307942,9308538-9308616,
9308806-9308922,9309185-9309314,9311071-9311111
Length = 194
Score = 79.0 bits (186), Expect = 2e-15
Identities = 33/80 (41%), Positives = 49/80 (61%)
Query: 62 YPMSAPKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL 121
YP PKV+ TK+YHPNID G +CL+IL++ W P L I T++ + L PN +DPL
Sbjct: 87 YPHEPPKVKCTTKVYHPNIDLDGNVCLNILREDWKPVLNINTIVYGLNLLFIQPNDEDPL 146
Query: 122 ANDVAELWKVNESEAIRNAK 141
+D A + + + + RN +
Sbjct: 147 NHDAAAVLRDDPQKFRRNVQ 166
>07_03_1012 +
23295976-23296264,23296475-23296548,23296972-23296996,
23297486-23297568,23297653-23297685,23298322-23298469,
23298625-23298722
Length = 249
Score = 76.6 bits (180), Expect = 8e-15
Identities = 35/87 (40%), Positives = 55/87 (63%)
Query: 62 YPMSAPKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPL 121
Y ++ V F T+IYH N+D G + +DIL++ WSPAL I VLL+I+A+++ P+P PL
Sbjct: 162 YMITCFMVTFKTRIYHCNVDSTGNLSMDILREGWSPALTISKVLLAIKAIITNPDPYCPL 221
Query: 122 ANDVAELWKVNESEAIRNAKEWTRRYA 148
+ L+ + ++ A EWT R+A
Sbjct: 222 VPSIGHLYLTDRTKHDEIAAEWTMRFA 248
>05_05_0110 +
22470869-22470920,22471044-22471146,22473261-22473358,
22473430-22473530,22474052-22474129,22474578-22474655
Length = 169
Score = 73.7 bits (173), Expect = 6e-14
Identities = 40/151 (26%), Positives = 75/151 (49%), Gaps = 14/151 (9%)
Query: 10 KETQRLMQEPVPGISA-VPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMSAPK 68
K+ + L + PV G SA + ++N + V + GP D+ +YP S P
Sbjct: 14 KQLKDLAKNPVDGFSAGLVDDSNVFEWQVTIIGPPDTLYDGGYFNAIMTFPQNYPNSPPS 73
Query: 69 VRFITKIYHPNIDRLGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAP 115
VRF ++++HPN+ GR+C+ IL ++W+P + +++LSI ++LS+P
Sbjct: 74 VRFTSEMWHPNVYPDGRVCISILHPPGEDPNGYELASERWTPVHTVESIVLSIISMLSSP 133
Query: 116 NPDDPLANDVAELWKVNESEAIRNAKEWTRR 146
N + P + A+ W+ + + + R+
Sbjct: 134 NDESPANIEAAKDWREKRDDFKKKVRRIVRK 164
>01_06_1289 -
36010924-36011001,36011441-36011518,36012321-36012421,
36012506-36012603,36016213-36016315,36016435-36016486
Length = 169
Score = 73.7 bits (173), Expect = 6e-14
Identities = 40/151 (26%), Positives = 74/151 (49%), Gaps = 14/151 (9%)
Query: 10 KETQRLMQEPVPGISA-VPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMSAPK 68
K+ + L + PV G SA + ++N + V + GP D+ +YP S P
Sbjct: 14 KQLKDLAKHPVDGFSAGLVDDSNVFEWQVTIIGPPDTLYDGGYFNAIMSFPQNYPNSPPT 73
Query: 69 VRFITKIYHPNIDRLGRICLDIL-------------KDKWSPALQIRTVLLSIQALLSAP 115
VRF ++++HPN+ GR+C+ IL ++W+P + +++LSI ++LS P
Sbjct: 74 VRFTSEMWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSGP 133
Query: 116 NPDDPLANDVAELWKVNESEAIRNAKEWTRR 146
N + P + A+ W+ + + + R+
Sbjct: 134 NDESPANIEAAKEWREKRDDFKKKVRRLVRK 164
>02_05_0558 - 29950120-29950319,29951213-29951579,29952067-29952372
Length = 290
Score = 70.9 bits (166), Expect = 4e-13
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 5/145 (3%)
Query: 7 RIIKETQRLM-QEPVPGISAVPSE-TNARYFHVIVTGPEDSXXXXXXXXXXXXX-XXDYP 63
RII+ RL+ ++P P + P T+ ++ V++ GP + YP
Sbjct: 32 RIIRNELRLLWRDPPPYLRPGPEPVTDPFHWEVVIDGPAGTPYAGGTFPVDIQLPAAGYP 91
Query: 64 MSAPKVRFITKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLAN 123
PKV F T +YHPNID G + LD + WS A ++R +L+ ++L P D P+
Sbjct: 92 FVHPKVTFKTLVYHPNIDEEGNMVLD--AESWSCATKLRGLLIGFVSVLYDPLLDYPINY 149
Query: 124 DVAELWKVNESEAIRNAKEWTRRYA 148
D+AE + + A+ WTR ++
Sbjct: 150 DIAEQYAYDYERYEAEARAWTREFS 174
>04_04_0902 -
29262611-29262673,29262796-29262909,29262995-29263141,
29264922-29265005,29265151-29265225
Length = 160
Score = 69.7 bits (163), Expect = 9e-13
Identities = 32/117 (27%), Positives = 55/117 (47%)
Query: 31 NARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMSAPKVRFITKIYHPNIDRLGRICLDI 90
N + I+ G E + DYP +AP +F + +H N+ G +CL I
Sbjct: 40 NLMVWRCIIPGKEGTDWEGGYFPLTMQFTEDYPTNAPSCKFPSGFFHINVYDSGAVCLSI 99
Query: 91 LKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNESEAIRNAKEWTRRY 147
L W P++ +R +L+ IQ L PNP+ N EL++ + E + ++ ++Y
Sbjct: 100 LSTAWKPSITVRQILIGIQELFDDPNPNSAAQNISYELYRKDMEEYRKRVRQQAKKY 156
>03_01_0159 +
1298002-1298070,1298181-1298264,1300354-1300506,
1300589-1300702,1300814-1300876
Length = 160
Score = 69.7 bits (163), Expect = 9e-13
Identities = 35/119 (29%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Query: 31 NARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMSAPKVRFITKIYHPNIDRLGRICLDI 90
N +H + G + + DYP PK +F +HPN+ G +CL I
Sbjct: 38 NLMIWHCTIPGKQGTDWEGGYFPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSI 97
Query: 91 LKDK--WSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNESEAIRNAKEWTRRY 147
L + W PA+ ++ +L+ IQ LL PNP DP D L+ + +E R + ++Y
Sbjct: 98 LNEDSGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYHLFIQDPTEYKRRVRLQAKQY 156
>10_08_0755 -
20329127-20329189,20329276-20329389,20329465-20329617,
20331790-20332035
Length = 191
Score = 69.3 bits (162), Expect = 1e-12
Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Query: 31 NARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMSAPKVRFITKIYHPNIDRLGRICLDI 90
N +H + G + + DYP PK +F +HPN+ G +CL I
Sbjct: 69 NLMIWHCTIPGKQGTDWEGGYYPLTLHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSI 128
Query: 91 LKDK--WSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNESEAIRNAKEWTRRY 147
L + W PA+ ++ +L+ IQ LL PNP DP D ++ ++ E R + ++Y
Sbjct: 129 LNEDSGWRPAITVKQILVGIQDLLDQPNPADPAQTDGYHIFIQDKPEYKRRVRVQAKQY 187
>10_08_0197 +
15666873-15666916,15667098-15667177,15667490-15667604,
15667698-15667786,15667850-15667978,15670362-15670492
Length = 195
Score = 66.9 bits (156), Expect = 7e-12
Identities = 41/128 (32%), Positives = 57/128 (44%), Gaps = 14/128 (10%)
Query: 35 FHVIVTGPEDSXXXXXXXXXXXXXXXDYPMSAPKVRFITKIYHPNIDRL-GRICLDILKD 93
F V GP +S YP +P + F+ KIYHPN+D + G +CLD++
Sbjct: 32 FFVEFRGPTESIYQGGVWKVRVELPDAYPYKSPSIGFVNKIYHPNVDEMSGSVCLDVINQ 91
Query: 94 KWSPAL-QIRTVLLSIQA------------LLSAPNPDDPLANDVAELWKVNESEAIRNA 140
WSP +I VL+ I LL PNP DPL + A L + +
Sbjct: 92 TWSPMFGEITLVLVIISTDLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRPAYEQKV 151
Query: 141 KEWTRRYA 148
KE+ +YA
Sbjct: 152 KEYCEKYA 159
>12_02_1249 -
27331801-27331896,27331984-27332072,27334020-27334083,
27334208-27334336,27334554-27334607,27334712-27334741
Length = 153
Score = 60.1 bits (139), Expect = 7e-10
Identities = 31/65 (47%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 62 YPMSAPKVRFITKI-YHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQALL-SAPNPDD 119
YPM AP+V F+ HP+I G ICLDIL D WSPA+ + +V +SI ++L S+P
Sbjct: 65 YPMEAPQVIFLNPAPMHPHIYSNGHICLDILYDSWSPAMTVSSVCISILSMLSSSPAKQR 124
Query: 120 PLAND 124
P ND
Sbjct: 125 PQDND 129
>05_01_0561 + 4905107-4905272,4905945-4906033,4906832-4906960
Length = 127
Score = 60.1 bits (139), Expect = 7e-10
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 84 GRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNESEAIRNAKE 142
G ICLDIL+++WSP + +L SIQ+LL PNP+ P ++ A L+ N+ E R +E
Sbjct: 60 GSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARLFSENKREYNRKVRE 118
>03_02_0755 +
10932897-10933010,10933446-10933577,10933666-10933750,
10934668-10934831,10934911-10935357
Length = 313
Score = 51.6 bits (118), Expect = 3e-07
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 5/113 (4%)
Query: 6 RRIIKETQRLMQEPVPGISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMS 65
+RI++E + + P P A+P E + + + GP DS DYP
Sbjct: 15 KRILQEVKEMQSNPSPDFMAMPLEEDIFEWQFAILGPRDSEFEGGIYHGRIQLPSDYPFK 74
Query: 66 APKVRFITKIYHPNIDRLGRICLDILK---DKWSPALQIRTVLLSIQALLSAP 115
P +T I + +ICL I + W P+ +RT L+++ A + P
Sbjct: 75 PPSFMLLTPSGRFEIQK--KICLSISNYHPEHWQPSWSVRTALVALIAFMPTP 125
>02_05_0556 - 29940146-29940158,29941060-29941240,29941271-29941670
Length = 197
Score = 37.5 bits (83), Expect = 0.005
Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 18/161 (11%)
Query: 3 ALPRRIIKETQRLMQEPVPGISAVPSE-TNARYFHVIVTGPEDSXXXXXXXXXXXXXXXD 61
A RRI +E + L +P P T+ ++ VI+ GP + +
Sbjct: 35 AAQRRISRELEDLWLDPPAYCRPGPEPVTDLLHWEVIIDGPPGTPYAGGTFPVDVWYPNE 94
Query: 62 YPMSAPKVRFITKIYH--PNIDR----LGRICLDILKDKWSPALQIR---------TVLL 106
YP PK+ F TK+ ++ R + R ++ P+ R + LL
Sbjct: 95 YPFQPPKLTFKTKVKSLAQSLSRSLACVHRQISQLMLQSRVPSEHRRRGADGGGRASRLL 154
Query: 107 SIQALLSAPNPDDPLANDVAELWKVNESEAI-RNAKEWTRR 146
++L P D P+ +D+AE ++ NE E + A+EWTRR
Sbjct: 155 GFVSILYDPLLDYPINDDIAEQYE-NEYELYEKEAREWTRR 194
>01_01_0939 -
7404209-7404490,7405057-7405368,7405470-7405609,
7406226-7406289,7406378-7406616,7406957-7406983,
7407590-7407749
Length = 407
Score = 35.1 bits (77), Expect = 0.024
Identities = 29/122 (23%), Positives = 48/122 (39%), Gaps = 11/122 (9%)
Query: 7 RIIKETQRLMQEPVP-GISAVPSETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMS 65
+ I+ +L+Q+ +P I E + GP + +YP S
Sbjct: 149 KTIQNEWKLLQKDLPESIYVRAYEDRIDLLRAAIVGPAGTPYHDGLFFFDVRFPSEYPQS 208
Query: 66 APKVRFITK--IYHPNIDRLGRICLDILKDKWSPALQ--------IRTVLLSIQALLSAP 115
PKV + + +PN+ G++CL +L W + I VL+SIQ L+
Sbjct: 209 PPKVHYHSGGLRLNPNLYESGKVCLSLLNTWWGTGCEKWGKSKSTILQVLVSIQGLVLND 268
Query: 116 NP 117
P
Sbjct: 269 KP 270
>01_06_0247 +
27851206-27851255,27851382-27851496,27852280-27852468,
27853698-27854057,27854138-27854201,27854365-27854504,
27854610-27854918,27855135-27855389
Length = 493
Score = 32.7 bits (71), Expect = 0.13
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 7/48 (14%)
Query: 77 HPNIDRLGRICLDILK-------DKWSPALQIRTVLLSIQALLSAPNP 117
+PN+ G++CL +L +KW+P+ VL+SIQAL+ P
Sbjct: 318 NPNLYACGKVCLSLLNTWPGDGCEKWNPSNSTLQVLVSIQALVLNAKP 365
>05_07_0075 -
27513927-27514220,27514806-27515117,27515203-27515342,
27515502-27515565,27515637-27516083,27516169-27516303,
27517620-27517737,27517857-27517876
Length = 509
Score = 31.9 bits (69), Expect = 0.23
Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 11/120 (9%)
Query: 9 IKETQRLMQEPVPGISAVPS-ETNARYFHVIVTGPEDSXXXXXXXXXXXXXXXDYPMSAP 67
I+ +++++ +P V + E ++TGP + YP P
Sbjct: 249 IQHEWKVLEKDLPDTIFVRAYEDRMDLLRAVITGPAGTPYHDGLFFFDIYFPPHYPSVPP 308
Query: 68 KVRFITK--IYHPNIDRLGRICLDILK-------DKWSPA-LQIRTVLLSIQALLSAPNP 117
V + + +PN+ G++CL +L ++WSP+ + VL+S+QAL+ P
Sbjct: 309 LVNYRSGGLRLNPNLYACGKVCLSLLNTWSGSGCERWSPSNSTMLQVLVSVQALVLNAKP 368
>05_07_0076 -
27520152-27520379,27520785-27521096,27521194-27521333,
27521893-27521956,27522071-27522277,27522350-27522493,
27522578-27522709,27522880-27524294,27524647-27524920,
27526096-27526129,27527028-27527059
Length = 993
Score = 31.1 bits (67), Expect = 0.40
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 10/67 (14%)
Query: 61 DYPMSAPKVRFITK--IYHPNIDRLGRICLDILK-------DKWSPA-LQIRTVLLSIQA 110
DYP P V + + +PN+ G++CL +LK + W P + +LLS+QA
Sbjct: 808 DYPHEPPSVHYHSGGLRLNPNLYESGKVCLSLLKTWAGTGSEVWDPENSTVLQLLLSLQA 867
Query: 111 LLSAPNP 117
L+ P
Sbjct: 868 LVLNEKP 874
>02_02_0171 - 7427862-7428293
Length = 143
Score = 30.7 bits (66), Expect = 0.52
Identities = 13/23 (56%), Positives = 15/23 (65%)
Query: 17 QEPVPGISAVPSETNARYFHVIV 39
+ P P SA PS TN R FH+IV
Sbjct: 55 RRPSPSTSATPSVTNQRQFHLIV 77
>01_06_1014 - 33810112-33811995
Length = 627
Score = 28.3 bits (60), Expect = 2.8
Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Query: 91 LKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNESE--AIRNAKEWTRRYA 148
LKD+ L + + S+ LL A +P L +V+E W+ E E + N+ T + +
Sbjct: 103 LKDRMKLPLHVPVIKPSVPPLLPASSPAKLLPANVSEEWRRLEIERKILENSTMSTLQLS 162
Query: 149 MDN 151
DN
Sbjct: 163 YDN 165
>05_01_0415 -
3275236-3276244,3276342-3276428,3276829-3277208,
3279236-3279325
Length = 521
Score = 26.6 bits (56), Expect = 8.5
Identities = 12/27 (44%), Positives = 18/27 (66%)
Query: 89 DILKDKWSPALQIRTVLLSIQALLSAP 115
D LKD P+L I L++++AL+ AP
Sbjct: 482 DPLKDTSGPSLNILVKLMAVEALVFAP 508
>04_01_0123 -
1283197-1283292,1283330-1284439,1284790-1285177,
1285523-1287609
Length = 1226
Score = 26.6 bits (56), Expect = 8.5
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 5/44 (11%)
Query: 96 SPALQIRTVLLSIQALLSAPNPDDPLANDVAELWKVNESEAIRN 139
+PA IR V QA+L NP DP+ ND + W E++ N
Sbjct: 206 TPAQHIRAV----QAILRE-NPYDPVLNDDLKRWTERLRESVTN 244
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.319 0.134 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,017,211
Number of Sequences: 37544
Number of extensions: 134374
Number of successful extensions: 419
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 363
Number of HSP's gapped (non-prelim): 41
length of query: 151
length of database: 14,793,348
effective HSP length: 76
effective length of query: 75
effective length of database: 11,940,004
effective search space: 895500300
effective search space used: 895500300
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 56 (26.6 bits)
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