GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002559-TA|BGIBMGA002559-PA|IPR000608|Ubiquitin-
conjugating enzyme, E2
         (151 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A...    23   5.6  
AF513634-1|AAM53606.1|  216|Anopheles gambiae glutathione S-tran...    22   7.4  

>AF000953-1|AAB96576.1|  433|Anopheles gambiae carboxypeptidase A
           protein.
          Length = 433

 Score = 22.6 bits (46), Expect = 5.6
 Identities = 8/16 (50%), Positives = 12/16 (75%)

Query: 95  WSPALQIRTVLLSIQA 110
           W+PA+ I  V LS++A
Sbjct: 13  WAPAMAILAVALSVEA 28


>AF513634-1|AAM53606.1|  216|Anopheles gambiae glutathione
           S-transferase D5 protein.
          Length = 216

 Score = 22.2 bits (45), Expect = 7.4
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 88  LDILKDKWSPALQ-IRTVLLSIQALLSAPNPDDPLANDVAELWKVNESEAI 137
           +++  D  SP+ Q +  V   +   L+    +   A DVAEL KVN    I
Sbjct: 1   MELYSDIVSPSCQNVLLVAKKLGIALNIKKTNIMDATDVAELTKVNPQHLI 51


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.319    0.134    0.404 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,476
Number of Sequences: 2123
Number of extensions: 3846
Number of successful extensions: 3
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 2
length of query: 151
length of database: 516,269
effective HSP length: 59
effective length of query: 92
effective length of database: 391,012
effective search space: 35973104
effective search space used: 35973104
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 44 (21.8 bits)