GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002558-TA|BGIBMGA002558-PA|IPR002048|Calcium-binding
EF-hand
         (177 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    23   5.3  
AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450 pr...    23   5.3  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    23   5.3  
AY313948-1|AAP76391.1|  424|Anopheles gambiae cytochrome P450 CY...    23   7.0  
AY745225-1|AAU93492.1|  156|Anopheles gambiae cytochrome P450 pr...    22   9.3  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 23.0 bits (47), Expect = 5.3
 Identities = 10/26 (38%), Positives = 16/26 (61%)

Query: 104 IYDLDDDMYIGREDLLEATRLLTKGE 129
           IYD +D  YI +E+   A +  T+G+
Sbjct: 92  IYDFEDPDYIVQEEQEPAKKTQTRGK 117


>AY028784-1|AAK32958.2|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 23.0 bits (47), Expect = 5.3
 Identities = 10/38 (26%), Positives = 19/38 (50%)

Query: 129 ELHAQEREEIVASVLDEADVDGDGRLSFMDFEHVVVRA 166
           E H++ R++ +  ++D    DG      + FE V  +A
Sbjct: 261 EEHSERRDDFMQLLIDMMKQDGAAEEDPLKFEEVAAQA 298


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 23.0 bits (47), Expect = 5.3
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 5/59 (8%)

Query: 120 EATRLLTKGELHAQEREEIVASVLDEADVDGD--GRLSFMDFEHVVVRAPDFLSTFHIR 176
           EA   L+ G L A+ER   + S  +E D D        F+ + H V+  PD ++ +H R
Sbjct: 876 EAGGALSAGILRAEERINTMQSWQEEWDADASQADASRFVRWTHRVI--PD-IAAWHFR 931


>AY313948-1|AAP76391.1|  424|Anopheles gambiae cytochrome P450
           CYP6M4 protein.
          Length = 424

 Score = 22.6 bits (46), Expect = 7.0
 Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 2/40 (5%)

Query: 74  GNLTFEDFLDMMSVFSEAAPRDIKAWYAFRIYD--LDDDM 111
           G LTF +      VF  A      +  AF +Y+  LD DM
Sbjct: 227 GTLTFHEIAAQAFVFFVAGFETSSSLMAFTLYELALDQDM 266


>AY745225-1|AAU93492.1|  156|Anopheles gambiae cytochrome P450
           protein.
          Length = 156

 Score = 22.2 bits (45), Expect = 9.3
 Identities = 9/30 (30%), Positives = 17/30 (56%)

Query: 32  KRMTENQAHTIAVPVEEIEKLPELKENPFK 61
           KR+T  +  ++ +PV  I   P++   P+K
Sbjct: 99  KRITLRRGTSVIIPVYAIHYDPDIYPMPYK 128


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.322    0.138    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,022
Number of Sequences: 2123
Number of extensions: 7174
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 10
Number of HSP's gapped (non-prelim): 5
length of query: 177
length of database: 516,269
effective HSP length: 60
effective length of query: 117
effective length of database: 388,889
effective search space: 45500013
effective search space used: 45500013
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 45 (22.2 bits)