Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002554-TA|BGIBMGA002554-PA|undefined
(86 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A2R2X8 Cluster: Similarity: the similarities are mainly... 32 2.0
UniRef50_Q4QF54 Cluster: Putative uncharacterized protein; n=2; ... 32 2.6
UniRef50_Q4SRW8 Cluster: Chromosome 10 SCAF14487, whole genome s... 31 3.5
UniRef50_Q2JJB6 Cluster: Putative uncharacterized protein; n=1; ... 31 4.6
UniRef50_Q9VLJ8 Cluster: CG13090-PA; n=4; Endopterygota|Rep: CG1... 31 6.0
UniRef50_Q5KHD3 Cluster: Carrier, putative; n=6; Dikarya|Rep: Ca... 31 6.0
UniRef50_Q1FJT1 Cluster: Flagellin-like; n=1; Clostridium phytof... 30 8.0
UniRef50_Q0D9N1 Cluster: Os06g0707700 protein; n=11; Oryza sativ... 30 8.0
>UniRef50_A2R2X8 Cluster: Similarity: the similarities are mainly
based on repetetive structures; n=5;
Trichocomaceae|Rep: Similarity: the similarities are
mainly based on repetetive structures - Aspergillus
niger
Length = 339
Score = 32.3 bits (70), Expect = 2.0
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 39 LGASTHLTRQVAYW-KRISELRSCGCSGHADHAERVSGDRSLR 80
LGA THLT + W R++EL + + HA++AE S+R
Sbjct: 8 LGAFTHLTENIPSWIDRLAELSAHTAAKHAEYAEAYRRHVSVR 50
>UniRef50_Q4QF54 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 1892
Score = 31.9 bits (69), Expect = 2.6
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 4/76 (5%)
Query: 9 ARITFPLFAPSTVVNQKGGAITETVGATRGLGASTHLTRQVA---YWKRISELRSCGCSG 65
ARI + A T G T G+ GAS LT + + +R+ SCGCS
Sbjct: 1362 ARIEHRVAAERTTAKHSGSVDGLTDGSV-AFGASNSLTTTPSSNRHLRRVVTPHSCGCSR 1420
Query: 66 HADHAERVSGDRSLRV 81
+ + RV RS+R+
Sbjct: 1421 GSSSSPRVRRARSVRI 1436
>UniRef50_Q4SRW8 Cluster: Chromosome 10 SCAF14487, whole genome
shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 10
SCAF14487, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 2081
Score = 31.5 bits (68), Expect = 3.5
Identities = 13/40 (32%), Positives = 24/40 (60%)
Query: 43 THLTRQVAYWKRISELRSCGCSGHADHAERVSGDRSLRVL 82
T L +VA+W+R+S+ S +G+ D E + R+++ L
Sbjct: 236 TRLEAEVAHWRRLSQTSSSAGAGNGDQGEILKLQRTIKEL 275
>UniRef50_Q2JJB6 Cluster: Putative uncharacterized protein; n=1;
Synechococcus sp. JA-2-3B'a(2-13)|Rep: Putative
uncharacterized protein - Synechococcus sp. (strain
JA-2-3B'a(2-13)) (Cyanobacteria bacteriumYellowstone
B-Prime)
Length = 123
Score = 31.1 bits (67), Expect = 4.6
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 50 AYWKRISELRSCGCSGHADHAERVSGDRSLR 80
AY R++ LR G HA H E+ + +RS+R
Sbjct: 81 AYLMRLNRLRDPGSQDHAHHLEQAARERSIR 111
>UniRef50_Q9VLJ8 Cluster: CG13090-PA; n=4; Endopterygota|Rep:
CG13090-PA - Drosophila melanogaster (Fruit fly)
Length = 453
Score = 30.7 bits (66), Expect = 6.0
Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Query: 2 NESNGYCARITFPLFAPSTVVNQKG-----GAITETVGATRGLGA 41
N +NG C R FP+ P V G GA+T T+GA + L A
Sbjct: 225 NYANGPCYRCIFPVPPPPEAVTNCGDGGVLGAVTGTIGAMQALEA 269
>UniRef50_Q5KHD3 Cluster: Carrier, putative; n=6; Dikarya|Rep:
Carrier, putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 361
Score = 30.7 bits (66), Expect = 6.0
Identities = 13/50 (26%), Positives = 24/50 (48%)
Query: 4 SNGYCARITFPLFAPSTVVNQKGGAITETVGATRGLGASTHLTRQVAYWK 53
+ G A +T PL T++ +G + E + RG+G + + + WK
Sbjct: 268 AGGLAAAVTTPLDVAKTLLQTRGSSADERIRGARGMGEALRIIWERDGWK 317
>UniRef50_Q1FJT1 Cluster: Flagellin-like; n=1; Clostridium
phytofermentans ISDg|Rep: Flagellin-like - Clostridium
phytofermentans ISDg
Length = 514
Score = 30.3 bits (65), Expect = 8.0
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 2/72 (2%)
Query: 16 FAPSTVVNQKGG-AITETVGATRGLGASTHLTRQVAYWKRISELRSCGCSGHADHAERVS 74
F+ S VVN +G AIT +G T + +A K+ISE+ SG+ ++ +
Sbjct: 346 FSQSMVVNTQGSDAITHNIGRTID-DIIFAVNSVIAVDKKISEVNKMLASGNITEEQKTT 404
Query: 75 GDRSLRVLLCSK 86
+++L VL K
Sbjct: 405 LNQALEVLTAEK 416
>UniRef50_Q0D9N1 Cluster: Os06g0707700 protein; n=11; Oryza
sativa|Rep: Os06g0707700 protein - Oryza sativa subsp.
japonica (Rice)
Length = 680
Score = 30.3 bits (65), Expect = 8.0
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 34 GATRGLGASTHLTRQVAYWKRISELRSCG----CSGHADHAERVSGDRSLRVLLCS 85
G GL + H T + + +S SCG S HA+ E V+G +R+L CS
Sbjct: 108 GCLLGLVLNAHHTARNIKRRYLSASCSCGGDEEASRHANEEEAVAGSGCMRILACS 163
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.319 0.131 0.403
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,916,305
Number of Sequences: 1657284
Number of extensions: 2617237
Number of successful extensions: 5897
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 5894
Number of HSP's gapped (non-prelim): 8
length of query: 86
length of database: 575,637,011
effective HSP length: 64
effective length of query: 22
effective length of database: 469,570,835
effective search space: 10330558370
effective search space used: 10330558370
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 65 (30.3 bits)
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