Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002553-TA|BGIBMGA002553-PA|undefined
(52 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY167906-1|AAO32794.1| 1200|Drosophila melanogaster scribbled pr... 27 2.4
AY167905-1|AAO32793.1| 1069|Drosophila melanogaster scribbled pr... 27 2.4
AY167904-1|AAO32792.1| 1850|Drosophila melanogaster scribbled pr... 27 2.4
AY167903-1|AAO32791.1| 1205|Drosophila melanogaster scribbled pr... 27 2.4
AJ252084-1|CAB70601.1| 1756|Drosophila melanogaster Vartul-1 pro... 27 2.4
BT003203-1|AAO24958.1| 1051|Drosophila melanogaster RE36115p pro... 27 4.2
AE013599-2492|AAM70883.1| 709|Drosophila melanogaster CG4853-PB... 27 4.2
AE013599-2491|AAF57849.2| 709|Drosophila melanogaster CG4853-PA... 27 4.2
AE013599-2224|AAF58038.1| 1051|Drosophila melanogaster CG15701-P... 27 4.2
AY118508-1|AAM49877.1| 973|Drosophila melanogaster LD13350p pro... 26 7.3
AE014297-1738|AAN13588.1| 954|Drosophila melanogaster CG9351-PC... 26 7.3
AE014297-1737|AAN13587.1| 954|Drosophila melanogaster CG9351-PB... 26 7.3
AE014297-1736|AAF54974.1| 954|Drosophila melanogaster CG9351-PA... 26 7.3
AE014297-472|AAN13360.2| 1091|Drosophila melanogaster CG15186-PB... 26 7.3
AE014297-471|AAS65115.1| 923|Drosophila melanogaster CG15186-PC... 26 7.3
AE014297-470|AAF54118.2| 1072|Drosophila melanogaster CG15186-PA... 26 7.3
>AY167906-1|AAO32794.1| 1200|Drosophila melanogaster scribbled
protein.
Length = 1200
Score = 27.5 bits (58), Expect = 2.4
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 1 MKHAAQRRTTPHNAAQRRTTPHSTAAPNVLAAVQAPDS 38
M H A T P AA TP TAAP A + APD+
Sbjct: 865 MVHGASSPTPP--AATSNITPLPTAAPVASADLTAPDT 900
>AY167905-1|AAO32793.1| 1069|Drosophila melanogaster scribbled
protein.
Length = 1069
Score = 27.5 bits (58), Expect = 2.4
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 1 MKHAAQRRTTPHNAAQRRTTPHSTAAPNVLAAVQAPDS 38
M H A T P AA TP TAAP A + APD+
Sbjct: 874 MVHGASSPTPP--AATSNITPLPTAAPVASADLTAPDT 909
>AY167904-1|AAO32792.1| 1850|Drosophila melanogaster scribbled
protein.
Length = 1850
Score = 27.5 bits (58), Expect = 2.4
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 1 MKHAAQRRTTPHNAAQRRTTPHSTAAPNVLAAVQAPDS 38
M H A T P AA TP TAAP A + APD+
Sbjct: 1515 MVHGASSPTPP--AATSNITPLPTAAPVASADLTAPDT 1550
>AY167903-1|AAO32791.1| 1205|Drosophila melanogaster scribbled
protein.
Length = 1205
Score = 27.5 bits (58), Expect = 2.4
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 1 MKHAAQRRTTPHNAAQRRTTPHSTAAPNVLAAVQAPDS 38
M H A T P AA TP TAAP A + APD+
Sbjct: 870 MVHGASSPTPP--AATSNITPLPTAAPVASADLTAPDT 905
>AJ252084-1|CAB70601.1| 1756|Drosophila melanogaster Vartul-1 protein
protein.
Length = 1756
Score = 27.5 bits (58), Expect = 2.4
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 1 MKHAAQRRTTPHNAAQRRTTPHSTAAPNVLAAVQAPDS 38
M H A T P AA TP TAAP A + APD+
Sbjct: 1421 MVHGASSPTPP--AATSNITPLPTAAPVASADLTAPDT 1456
>BT003203-1|AAO24958.1| 1051|Drosophila melanogaster RE36115p
protein.
Length = 1051
Score = 26.6 bits (56), Expect = 4.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 2 KHAAQRRTTPHNAAQRRTTPHSTAAPN 28
+ + +RTTP A R TT H+T N
Sbjct: 80 RESLSKRTTPSPGALRATTRHTTTTTN 106
>AE013599-2492|AAM70883.1| 709|Drosophila melanogaster CG4853-PB,
isoform B protein.
Length = 709
Score = 26.6 bits (56), Expect = 4.2
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 2 KHAAQRRTTPHNAAQRRTTPHSTAAPNVLAAVQAP 36
+ +A R TP NA + RTT +ST A + + P
Sbjct: 136 QQSALARATPENALKYRTTSNSTFASQATDSDERP 170
>AE013599-2491|AAF57849.2| 709|Drosophila melanogaster CG4853-PA,
isoform A protein.
Length = 709
Score = 26.6 bits (56), Expect = 4.2
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 2 KHAAQRRTTPHNAAQRRTTPHSTAAPNVLAAVQAP 36
+ +A R TP NA + RTT +ST A + + P
Sbjct: 136 QQSALARATPENALKYRTTSNSTFASQATDSDERP 170
>AE013599-2224|AAF58038.1| 1051|Drosophila melanogaster CG15701-PA
protein.
Length = 1051
Score = 26.6 bits (56), Expect = 4.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 2 KHAAQRRTTPHNAAQRRTTPHSTAAPN 28
+ + +RTTP A R TT H+T N
Sbjct: 80 RESLSKRTTPSPGALRATTRHTTTTTN 106
>AY118508-1|AAM49877.1| 973|Drosophila melanogaster LD13350p
protein.
Length = 973
Score = 25.8 bits (54), Expect = 7.3
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 3 HAAQRRTTPHNAAQRRTTPHSTAAPNVLAAVQAPDSNPL 41
H Q++ N Q++T P L++V+AP S L
Sbjct: 765 HQQQQQQQQQNPFQQQTQPEIAELQQQLSSVEAPQSQEL 803
>AE014297-1738|AAN13588.1| 954|Drosophila melanogaster CG9351-PC,
isoform C protein.
Length = 954
Score = 25.8 bits (54), Expect = 7.3
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 3 HAAQRRTTPHNAAQRRTTPHSTAAPNVLAAVQAPDSNPL 41
H Q++ N Q++T P L++V+AP S L
Sbjct: 746 HQQQQQQQQQNPFQQQTQPEIAELQQQLSSVEAPQSQEL 784
>AE014297-1737|AAN13587.1| 954|Drosophila melanogaster CG9351-PB,
isoform B protein.
Length = 954
Score = 25.8 bits (54), Expect = 7.3
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 3 HAAQRRTTPHNAAQRRTTPHSTAAPNVLAAVQAPDSNPL 41
H Q++ N Q++T P L++V+AP S L
Sbjct: 746 HQQQQQQQQQNPFQQQTQPEIAELQQQLSSVEAPQSQEL 784
>AE014297-1736|AAF54974.1| 954|Drosophila melanogaster CG9351-PA,
isoform A protein.
Length = 954
Score = 25.8 bits (54), Expect = 7.3
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 3 HAAQRRTTPHNAAQRRTTPHSTAAPNVLAAVQAPDSNPL 41
H Q++ N Q++T P L++V+AP S L
Sbjct: 746 HQQQQQQQQQNPFQQQTQPEIAELQQQLSSVEAPQSQEL 784
>AE014297-472|AAN13360.2| 1091|Drosophila melanogaster CG15186-PB,
isoform B protein.
Length = 1091
Score = 25.8 bits (54), Expect = 7.3
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 3 HAAQRRTTPHNAAQRRTTPHSTAAPNVLAAVQAPDSNPLFH 43
H+++RRT ++ + P S+ P V A AP S H
Sbjct: 918 HSSRRRTNSNSMSAPPGIPVSSGHPEVGATASAPPSTTHHH 958
>AE014297-471|AAS65115.1| 923|Drosophila melanogaster CG15186-PC,
isoform C protein.
Length = 923
Score = 25.8 bits (54), Expect = 7.3
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 3 HAAQRRTTPHNAAQRRTTPHSTAAPNVLAAVQAPDSNPLFH 43
H+++RRT ++ + P S+ P V A AP S H
Sbjct: 750 HSSRRRTNSNSMSAPPGIPVSSGHPEVGATASAPPSTTHHH 790
>AE014297-470|AAF54118.2| 1072|Drosophila melanogaster CG15186-PA,
isoform A protein.
Length = 1072
Score = 25.8 bits (54), Expect = 7.3
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 3 HAAQRRTTPHNAAQRRTTPHSTAAPNVLAAVQAPDSNPLFH 43
H+++RRT ++ + P S+ P V A AP S H
Sbjct: 899 HSSRRRTNSNSMSAPPGIPVSSGHPEVGATASAPPSTTHHH 939
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.315 0.122 0.366
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,041,710
Number of Sequences: 52641
Number of extensions: 95150
Number of successful extensions: 392
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 381
Number of HSP's gapped (non-prelim): 16
length of query: 52
length of database: 24,830,863
effective HSP length: 33
effective length of query: 19
effective length of database: 23,093,710
effective search space: 438780490
effective search space used: 438780490
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 53 (25.4 bits)
- SilkBase 1999-2023 -