Silkworm BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002552-TA|BGIBMGA002552-PA|IPR009269|Protein of unknown
function DUF926, IPR013090|Phospholipase A2, active site
         (1561 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569702-1|AAS86655.1|  400|Apis mellifera complementary sex det...    25   4.8  

>AY569702-1|AAS86655.1|  400|Apis mellifera complementary sex
            determiner protein.
          Length = 400

 Score = 25.0 bits (52), Expect = 4.8
 Identities = 14/59 (23%), Positives = 29/59 (49%)

Query: 1503 SGSRHRRMEAVRIRKENQIYSADEKRALAAFSKDERNKRENAILSQFRDVLKARQKRET 1561
            S SR R  E  + R+ +Q+++ +EK      S+   ++        +++  + R+ RET
Sbjct: 252  SCSRDRSREYKKDRRYDQLHNVEEKHLRERTSRRRYSRSREREQKSYKNEREYREYRET 310


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.320    0.133    0.406 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 337,523
Number of Sequences: 429
Number of extensions: 11256
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 14
Number of HSP's gapped (non-prelim): 1
length of query: 1561
length of database: 140,377
effective HSP length: 67
effective length of query: 1494
effective length of database: 111,634
effective search space: 166781196
effective search space used: 166781196
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 50 (24.2 bits)