GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002552-TA|BGIBMGA002552-PA|IPR009269|Protein of unknown
function DUF926, IPR013090|Phospholipase A2, active site
         (1561 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    31   0.082

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 30.7 bits (66), Expect = 0.082
 Identities = 23/117 (19%), Positives = 49/117 (41%), Gaps = 3/117 (2%)

Query: 2   IEGLQEMLETINNSKVDDVITILPSWAHFYKILAIDPDRKVREYTQLCHSSVVRACGRRL 61
           ++ ++ ++E  +  K   V+ I+P   +F  I++I PD   + + +L  S + +    + 
Sbjct: 165 LKKMKYLVEVQDEVKPRGVLNIIPKQDNFRAIVSIFPDSARKPFFKLLTSKIYKVLEEKY 224

Query: 62  APRLRQLVPAWLQARHDEHGPAQAHARTSLASTFPDAKLPEVLAFCKTEVMTHFLDN 118
                 L   W +      G      +  +   + + K+P VL      + TH LD+
Sbjct: 225 KTS-GSLYTCWSEFTQKTQGQIYG-IKVDIRDAYGNVKIP-VLCKLIQSIPTHLLDS 278


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.133    0.406 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 274,732
Number of Sequences: 317
Number of extensions: 9169
Number of successful extensions: 17
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 16
Number of HSP's gapped (non-prelim): 1
length of query: 1561
length of database: 114,650
effective HSP length: 66
effective length of query: 1495
effective length of database: 93,728
effective search space: 140123360
effective search space used: 140123360
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 49 (23.8 bits)