Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002552-TA|BGIBMGA002552-PA|IPR009269|Protein of unknown
function DUF926, IPR013090|Phospholipase A2, active site
(1561 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0377 + 17086775-17088310 112 2e-24
08_02_0974 + 23200053-23200167,23200184-23200665 75 3e-13
01_07_0383 - 43195095-43195322,43195408-43195638,43196134-431964... 64 6e-10
03_02_1035 - 13557425-13557721,13557855-13558058,13558143-135583... 34 1.0
01_01_1172 - 9324919-9325071,9325425-9325570,9326986-9327039,932... 33 1.4
07_03_0922 - 22612773-22613321,22613616-22614189,22614389-226144... 31 5.6
11_03_0026 - 9057965-9058234,9059410-9059522,9059612-9059802,906... 31 7.4
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 31 9.7
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 31 9.7
06_01_0281 + 2063250-2064302 31 9.7
06_01_0279 + 2049394-2050446 31 9.7
>09_04_0377 + 17086775-17088310
Length = 511
Score = 112 bits (270), Expect = 2e-24
Identities = 61/147 (41%), Positives = 91/147 (61%), Gaps = 7/147 (4%)
Query: 1408 EEEIWVEKGKEHEVQQAQSELCKDNEELSSEIIGPEARAIGSGALSVREXXXXXXXXXXX 1467
E EI E K E+ +AQ + +NE +GP G +S
Sbjct: 353 EPEIDPEAIKFKEMLEAQKKAALENEMP----VGPMPLPRAEGHISY---GGALRPGEGD 405
Query: 1468 XXXXFVADGKRIPRRGEIGLTSDEIASYEAVGYVMSGSRHRRMEAVRIRKENQIYSADEK 1527
+V GKRIPRRGE+GL+++EI +E +GYVMSGSRH+RM A+RIRKENQ+YSA++K
Sbjct: 406 AIAQYVQQGKRIPRRGEVGLSAEEIQKFEDLGYVMSGSRHQRMNAIRIRKENQVYSAEDK 465
Query: 1528 RALAAFSKDERNKRENAILSQFRDVLK 1554
RALA F+ +E++KRE+ +++ + +++
Sbjct: 466 RALAMFNYEEKSKREHKVMADLQRLVQ 492
>08_02_0974 + 23200053-23200167,23200184-23200665
Length = 198
Score = 75.4 bits (177), Expect = 3e-13
Identities = 33/52 (63%), Positives = 43/52 (82%)
Query: 1499 GYVMSGSRHRRMEAVRIRKENQIYSADEKRALAAFSKDERNKRENAILSQFR 1550
GYVMSGSRH R+ AVR+RKENQ+YSA+EKRALAAF+ ++R +RE+ + R
Sbjct: 124 GYVMSGSRHARITAVRLRKENQVYSAEEKRALAAFNSEQRARRESKVRDDLR 175
>01_07_0383 -
43195095-43195322,43195408-43195638,43196134-43196454,
43196512-43196589,43196664-43197727,43197813-43198503,
43198743-43199541,43200010-43200158,43200159-43200286,
43200389-43200494,43200835-43200843,43201332-43201821,
43201896-43202554,43203759-43203851,43204044-43204196,
43205092-43205194,43205376-43205467,43206229-43206306,
43206987-43207049,43207339-43207512
Length = 1902
Score = 64.5 bits (150), Expect = 6e-10
Identities = 44/126 (34%), Positives = 64/126 (50%), Gaps = 5/126 (3%)
Query: 19 DVITILPSWAHFYKILAIDPDRKVREYTQLCHSSVVRACGRRLAPRLRQLVPAWLQARHD 78
+V+ I+P WA YK L +D +R+VR T SS+V+ + LAP L+ L+ W ++ D
Sbjct: 97 EVVQIVPQWAFEYKRLLLDYNREVRRATHDTMSSLVKTVKKGLAPHLKALMGPWWFSQFD 156
Query: 79 EHGPAQAHARTSLASTFPDA-KLPEVLAFCKTEVMTHFLDNLIGTGEASISKKA---DSP 134
AR S + FP + K + L C E H +NL T +A +S KA D
Sbjct: 157 PALEVAQAARHSFEAAFPQSDKRLDALMLCVKETFLHLNENLKLTTQA-LSDKATPMDEL 215
Query: 135 EDKEQQ 140
ED Q+
Sbjct: 216 EDMHQR 221
>03_02_1035 -
13557425-13557721,13557855-13558058,13558143-13558332,
13558450-13558841,13558931-13559023,13559297-13559500,
13559572-13559635,13559760-13559806,13559825-13559971,
13560243-13560335,13560420-13560599,13560993-13561128,
13561216-13561466,13561556-13561669,13561794-13561991,
13562050-13562110,13562921-13563210
Length = 986
Score = 33.9 bits (74), Expect = 1.0
Identities = 56/243 (23%), Positives = 100/243 (41%), Gaps = 32/243 (13%)
Query: 320 KHFYEQFFDAIFVGLEKKNILSSKSERQSWLSGLAEALRHLARQDDDFVLEVVTSVHRAW 379
K F+ ++ D I+V +EK I+ + ++ L E + D DFV + V ++ R
Sbjct: 410 KVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCA 469
Query: 380 LRRVLAPRSDQRLMHELIKCSASNMAACVKFWHQQSEDKYDQLIRNFWQNVNFTLLSQIE 439
++ A ++ ELIK + + +K ++ + Y+ +I TL ++
Sbjct: 470 IKLERAAERCISVLLELIKIKEAIIV--IKDIFRRYPNTYESIIA--------TLCESLD 519
Query: 440 TLSDNTSDTASATAGHLTGDCEEWCI-EYXXXXXXXXXXXXRFLRSPARTPALLRAPHLL 498
TL D A A + W I EY FL + PAL++ LL
Sbjct: 520 TL-----DEPEAKASMI------WIIGEYAERIDNADELLESFLETFPEEPALVQL-QLL 567
Query: 499 TACLAHEILISKEAVSEIID---------VINKTLADPDSPELELRSRMGAQLATTLPQD 549
TA + + E ++I V+N + D+P+L R+ + +L +T P+
Sbjct: 568 TATVKLFLKKPTEGPQQMIQVAILIWLFAVLNNATVETDNPDLRDRAYIYWRLLSTDPEA 627
Query: 550 YHD 552
D
Sbjct: 628 AKD 630
>01_01_1172 - 9324919-9325071,9325425-9325570,9326986-9327039,
9327647-9327866,9327976-9328083
Length = 226
Score = 33.5 bits (73), Expect = 1.4
Identities = 17/33 (51%), Positives = 25/33 (75%), Gaps = 1/33 (3%)
Query: 1526 EKRALAAFSKDERNKRENAILSQFRDVLKARQK 1558
E ALA F+ DE NKRENA+L +F V++A+++
Sbjct: 20 ETDALARFAVDEHNKRENALL-EFVRVVEAKEQ 51
>07_03_0922 -
22612773-22613321,22613616-22614189,22614389-22614466,
22615455-22615504,22616215-22616448
Length = 494
Score = 31.5 bits (68), Expect = 5.6
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 333 GLEKKNILSSKSERQSWLSGLAEALRHLARQDDDFVLEVVTSVHRAWLR--RVLAPRSDQ 390
GL+ N+ S S + LAE L+ ++ Q D ++L+ V R R +++ D
Sbjct: 269 GLKTPNLESGVSVVEKAKPNLAEILKTISTQSDCYMLQRRLDVQRKRTRYKKMIRRHIDF 328
Query: 391 RLMHELIKCSASN 403
R++H IK A++
Sbjct: 329 RILHSKIKSGATS 341
>11_03_0026 -
9057965-9058234,9059410-9059522,9059612-9059802,
9060606-9060720,9061781-9061907,9062915-9062990,
9064247-9064365,9065430-9065593,9065666-9065779,
9065966-9066065,9066276-9066340,9068175-9068253,
9069513-9069659,9069904-9070161,9070657-9070852,
9071179-9071402,9072531-9072554
Length = 793
Score = 31.1 bits (67), Expect = 7.4
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 499 TACLAHEILISKEAVSEIIDVINKTLADPDSPELELRSRMGAQLATTLPQDYHDQNFSR 557
T L H + + ++ + + N TLAD + ELRS +GAQ+A P H N+ R
Sbjct: 526 TLALLHRYWEALQVINRTLKLGNDTLADENKE--ELRS-LGAQIAYRAPDPRHGFNYVR 581
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 30.7 bits (66), Expect = 9.7
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 510 KEAVSEIIDVINKTLADPDSPELELRSRMGAQLATTLPQDYHD 552
KE V I +IN L+D D E+ S + ++ LP D D
Sbjct: 49 KEEVKTISGIINSALSDDDDMLSEIESLLSGEIDIPLPSDRFD 91
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 30.7 bits (66), Expect = 9.7
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 510 KEAVSEIIDVINKTLADPDSPELELRSRMGAQLATTLPQDYHD 552
KE V I +IN L+D D E+ S + ++ LP D D
Sbjct: 354 KEEVKTISGIINSALSDDDDMLSEIESLLSGEIDIPLPSDRFD 396
>06_01_0281 + 2063250-2064302
Length = 350
Score = 30.7 bits (66), Expect = 9.7
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 328 DAIFVGLEKKNILSSKSERQSWLSGLAEALRHLARQDDDFVLEVVTSVHRAWLRRVLAPR 387
DA+ + E +IL K E++ W+ ALRH+AR ++T + L +L
Sbjct: 204 DAVRLAPEYLHILLEKVEQEGWICPTLPALRHVAR-----FANLLTDLQDRVLPGLLNDH 258
Query: 388 SDQRLMHELIKC 399
+D ++ +L C
Sbjct: 259 TDPAVLRKLRTC 270
>06_01_0279 + 2049394-2050446
Length = 350
Score = 30.7 bits (66), Expect = 9.7
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 328 DAIFVGLEKKNILSSKSERQSWLSGLAEALRHLARQDDDFVLEVVTSVHRAWLRRVLAPR 387
DA+ + E +IL K E++ W+ ALRH+AR ++T + L +L
Sbjct: 204 DAVRLAPEYLHILLEKVEQEGWICPTLPALRHVAR-----FANLLTDLQDRVLPGLLNDH 258
Query: 388 SDQRLMHELIKC 399
+D ++ +L C
Sbjct: 259 TDPAVLRKLRTC 270
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.320 0.133 0.406
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,706,883
Number of Sequences: 37544
Number of extensions: 1339750
Number of successful extensions: 3278
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 3268
Number of HSP's gapped (non-prelim): 14
length of query: 1561
length of database: 14,793,348
effective HSP length: 92
effective length of query: 1469
effective length of database: 11,339,300
effective search space: 16657431700
effective search space used: 16657431700
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 66 (30.7 bits)
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