Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002550-TA|BGIBMGA002550-PA|IPR001873|Na+ channel,
amiloride-sensitive
(341 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68003-1|CAA91975.1| 664|Caenorhabditis elegans Hypothetical pr... 36 0.041
U76403-1|AAB39735.1| 664|Caenorhabditis elegans degenerin protein. 36 0.041
Z81133-3|CAB03443.3| 527|Caenorhabditis elegans Hypothetical pr... 31 0.89
U28738-2|AAA68309.4| 982|Caenorhabditis elegans Hypothetical pr... 31 0.89
Z81017-13|CAB02674.2| 526|Caenorhabditis elegans Hypothetical p... 30 2.1
Z68005-5|CAA91993.2| 526|Caenorhabditis elegans Hypothetical pr... 30 2.1
U61948-5|AAB03149.2| 509|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z81453-3|CAB03791.1| 480|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z48045-11|CAM33500.1| 887|Caenorhabditis elegans Hypothetical p... 30 2.7
Z48045-10|CAA88101.2| 849|Caenorhabditis elegans Hypothetical p... 30 2.7
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Hypothetical ... 29 3.6
Z82266-1|CAB05178.2| 626|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z69883-4|CAA93742.2| 480|Caenorhabditis elegans Hypothetical pr... 29 6.3
L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family... 29 6.3
AC024791-30|AAL32250.2| 2460|Caenorhabditis elegans Hypothetical... 29 6.3
Z72506-10|CAA96623.1| 364|Caenorhabditis elegans Hypothetical p... 28 8.3
Z72506-8|CAC42277.1| 199|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z71263-8|CAA95826.1| 364|Caenorhabditis elegans Hypothetical pr... 28 8.3
U40941-5|AAA81710.1| 300|Caenorhabditis elegans Hypothetical pr... 28 8.3
AF000198-9|AAB53057.4| 684|Caenorhabditis elegans Hypothetical ... 28 8.3
>Z68003-1|CAA91975.1| 664|Caenorhabditis elegans Hypothetical
protein E02H4.1 protein.
Length = 664
Score = 35.9 bits (79), Expect = 0.041
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 301 FYRKIVAVGGMAGLFLGCSVLSFMEILYFL--TLRLVC 336
++ + +GG AGLFLG S++S +E L+F TL + C
Sbjct: 598 WFNLMADMGGQAGLFLGASIMSVIEFLFFAVRTLGIAC 635
>U76403-1|AAB39735.1| 664|Caenorhabditis elegans degenerin protein.
Length = 664
Score = 35.9 bits (79), Expect = 0.041
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 301 FYRKIVAVGGMAGLFLGCSVLSFMEILYFL--TLRLVC 336
++ + +GG AGLFLG S++S +E L+F TL + C
Sbjct: 598 WFNLMADMGGQAGLFLGASIMSVIEFLFFAVRTLGIAC 635
>Z81133-3|CAB03443.3| 527|Caenorhabditis elegans Hypothetical
protein T28B8.5 protein.
Length = 527
Score = 31.5 bits (68), Expect = 0.89
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 301 FYRKIVAVGGMAGLFLGCSVLSFME--ILYFLTLRLVCYAK 339
F I VGG GLFLG S++S +E +L FL C K
Sbjct: 432 FVNFISDVGGQVGLFLGMSIISAIEYLVLIFLVFFYCCTHK 472
>U28738-2|AAA68309.4| 982|Caenorhabditis elegans Hypothetical
protein T28D9.7 protein.
Length = 982
Score = 31.5 bits (68), Expect = 0.89
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 301 FYRKIVAVGGMAGLFLGCSVLSFMEILY 328
F+ +GG GLFLG S+L+ +EI+Y
Sbjct: 734 FWSLACDIGGALGLFLGASLLTIIEIVY 761
>Z81017-13|CAB02674.2| 526|Caenorhabditis elegans Hypothetical
protein F59F3.4 protein.
Length = 526
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 308 VGGMAGLFLGCSVLSFMEILYFL 330
+GG + LF+GCS ++ ME+ FL
Sbjct: 316 LGGASSLFMGCSCVTLMEMFVFL 338
>Z68005-5|CAA91993.2| 526|Caenorhabditis elegans Hypothetical
protein F59F3.4 protein.
Length = 526
Score = 30.3 bits (65), Expect = 2.1
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 308 VGGMAGLFLGCSVLSFMEILYFL 330
+GG + LF+GCS ++ ME+ FL
Sbjct: 316 LGGASSLFMGCSCVTLMEMFVFL 338
>U61948-5|AAB03149.2| 509|Caenorhabditis elegans Hypothetical
protein C46A5.2 protein.
Length = 509
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/22 (54%), Positives = 18/22 (81%)
Query: 305 IVAVGGMAGLFLGCSVLSFMEI 326
I +GG AGLF+G SV+SF+++
Sbjct: 470 ISELGGQAGLFVGSSVMSFVQL 491
>Z81453-3|CAB03791.1| 480|Caenorhabditis elegans Hypothetical
protein B0250.4 protein.
Length = 480
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/75 (22%), Positives = 32/75 (42%)
Query: 217 HGPSEVPDVATKNMYSEKDFYLKLYVTAVAIYTTSDAAELSISQRRCRFPEENNLLHNSI 276
+G EV ++ SE+DFY K ++ D AEL + + + P + +
Sbjct: 306 YGVMEVSKQRREHYISEEDFYTKFPGACNKCFSNFDTAELMLEHKSEKHPGWEHEEKPKV 365
Query: 277 YSYTMCRMECRIRLC 291
Y+ C+ ++C
Sbjct: 366 YADDEYTFYCQEKMC 380
>Z48045-11|CAM33500.1| 887|Caenorhabditis elegans Hypothetical
protein C41C4.5b protein.
Length = 887
Score = 29.9 bits (64), Expect = 2.7
Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 7/92 (7%)
Query: 9 TPQGKMSLLWLITVGLCAFGSLYLSQTTWSRYQSSPTVISMDRDMFAWNTTFPCVTICPD 68
T GK W +C L S+Y+ + D D+ N FP +TIC
Sbjct: 86 TADGKWRWFWYTAFTICLLALLIQIFFLISKYRQYGKTV--DLDLKFENAPFPSITIC-- 141
Query: 69 NVLDEKKLAIYLRSFKEEDKSTLEAFIRGLSN 100
N+ KK AI K+ +EA+ R + +
Sbjct: 142 NLNPYKKSAI---QSNPNTKAMMEAYSRRIGS 170
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 308 VGGMAGLFLGCSVLSFMEILYFLTLRLVCYAK 339
+GG+ GL++G SV+S +EI+ + Y +
Sbjct: 694 LGGLTGLWIGASVVSLLEIVTLIVFATQAYVR 725
>Z48045-10|CAA88101.2| 849|Caenorhabditis elegans Hypothetical
protein C41C4.5a protein.
Length = 849
Score = 29.9 bits (64), Expect = 2.7
Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 7/92 (7%)
Query: 9 TPQGKMSLLWLITVGLCAFGSLYLSQTTWSRYQSSPTVISMDRDMFAWNTTFPCVTICPD 68
T GK W +C L S+Y+ + D D+ N FP +TIC
Sbjct: 48 TADGKWRWFWYTAFTICLLALLIQIFFLISKYRQYGKTV--DLDLKFENAPFPSITIC-- 103
Query: 69 NVLDEKKLAIYLRSFKEEDKSTLEAFIRGLSN 100
N+ KK AI K+ +EA+ R + +
Sbjct: 104 NLNPYKKSAI---QSNPNTKAMMEAYSRRIGS 132
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 308 VGGMAGLFLGCSVLSFMEILYFLTLRLVCYAK 339
+GG+ GL++G SV+S +EI+ + Y +
Sbjct: 656 LGGLTGLWIGASVVSLLEIVTLIVFATQAYVR 687
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Hypothetical
protein Y67D8C.5 protein.
Length = 4177
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 80 LRSFKEEDKSTLEAFIRGLSNISYENFNTVPIYDGI 115
LRSF++EDK+ F+ G S + + F ++ +G+
Sbjct: 4088 LRSFEKEDKAKFLQFVTGTSKVPLQGFASLEGMNGV 4123
>Z82266-1|CAB05178.2| 626|Caenorhabditis elegans Hypothetical
protein F23B2.3 protein.
Length = 626
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/25 (44%), Positives = 18/25 (72%)
Query: 307 AVGGMAGLFLGCSVLSFMEILYFLT 331
A+GG G+FLG SV++ +E+ F +
Sbjct: 502 AIGGNMGMFLGGSVITIVELFLFFS 526
>Z69883-4|CAA93742.2| 480|Caenorhabditis elegans Hypothetical
protein C27C12.5 protein.
Length = 480
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/23 (43%), Positives = 17/23 (73%)
Query: 308 VGGMAGLFLGCSVLSFMEILYFL 330
+GG+ GLFLG S ++ +E+ +L
Sbjct: 357 IGGVMGLFLGMSCVTLLEVFIYL 379
>L14324-6|AAA28182.1| 3343|Caenorhabditis elegans Cadherin family
protein 3 protein.
Length = 3343
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 5/47 (10%)
Query: 36 TWSRYQSSPTVISMDRDMFAWNTTFPCVTICPDNVLDEKKLAIYLRS 82
TW R S + ++MD + F + TF VT V KLA+ L S
Sbjct: 801 TWQRLNISISAVNMDSERFLQSKTFLLVT-----VTSSSKLAVQLNS 842
>AC024791-30|AAL32250.2| 2460|Caenorhabditis elegans Hypothetical
protein Y47G6A.29 protein.
Length = 2460
Score = 28.7 bits (61), Expect = 6.3
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 98 LSNISYENFNTVPIYDGIPSDKYLE 122
LS++ + FNT+P+Y+ D+ LE
Sbjct: 1806 LSDVEMQEFNTLPLYEDYEDDEMLE 1830
>Z72506-10|CAA96623.1| 364|Caenorhabditis elegans Hypothetical
protein F52A8.6a protein.
Length = 364
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 158 AVNSKVAVYNSPEYRSANRWDIIKK 182
A ++ V VY+S +Y S NR D++KK
Sbjct: 245 AADAFVLVYSSADYESFNRVDLLKK 269
>Z72506-8|CAC42277.1| 199|Caenorhabditis elegans Hypothetical
protein F52A8.6c protein.
Length = 199
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 158 AVNSKVAVYNSPEYRSANRWDIIKK 182
A ++ V VY+S +Y S NR D++KK
Sbjct: 80 AADAFVLVYSSADYESFNRVDLLKK 104
>Z71263-8|CAA95826.1| 364|Caenorhabditis elegans Hypothetical
protein F52A8.6a protein.
Length = 364
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 158 AVNSKVAVYNSPEYRSANRWDIIKK 182
A ++ V VY+S +Y S NR D++KK
Sbjct: 245 AADAFVLVYSSADYESFNRVDLLKK 269
>U40941-5|AAA81710.1| 300|Caenorhabditis elegans Hypothetical
protein F35C8.5 protein.
Length = 300
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 177 WDIIKKPNETLFIHPLDGEVYAQVMTIDWVQILSSPQVYI 216
WD IK NE + PL YA + WV + + V++
Sbjct: 28 WDWIKNGNEHILSSPLFPPFYALSIDYTWVAVFTFIDVFL 67
>AF000198-9|AAB53057.4| 684|Caenorhabditis elegans Hypothetical
protein T28F2.7 protein.
Length = 684
Score = 28.3 bits (60), Expect = 8.3
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 308 VGGMAGLFLGCSVLSFMEILYFLT 331
+GG G+F+G SV + +E+ FL+
Sbjct: 517 IGGNMGMFMGMSVFTIIELFLFLS 540
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.324 0.137 0.430
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,299,817
Number of Sequences: 27539
Number of extensions: 338397
Number of successful extensions: 957
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 930
Number of HSP's gapped (non-prelim): 28
length of query: 341
length of database: 12,573,161
effective HSP length: 82
effective length of query: 259
effective length of database: 10,314,963
effective search space: 2671575417
effective search space used: 2671575417
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 60 (28.3 bits)
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