Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002546-TA|BGIBMGA002546-PA|IPR000181|Formylmethionine
deformylase
(177 letters)
Database: fruitfly
52,641 sequences; 24,830,863 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT015988-1|AAV36873.1| 238|Drosophila melanogaster RE57173p pro... 91 1e-18
AE014297-1176|AAF54540.2| 238|Drosophila melanogaster CG31278-P... 91 1e-18
BT022698-1|AAY55114.1| 206|Drosophila melanogaster IP07194p pro... 80 1e-15
AE014297-1177|AAN13481.1| 196|Drosophila melanogaster CG31373-P... 79 4e-15
AY119153-1|AAM51013.1| 724|Drosophila melanogaster RE62284p pro... 31 0.67
AF417860-1|AAL38511.1| 724|Drosophila melanogaster PH domain pr... 31 0.67
AE014134-2158|AAF53164.1| 724|Drosophila melanogaster CG5336-PA... 31 0.67
AE014134-886|AAZ66447.1| 7744|Drosophila melanogaster CG33715-PB... 28 6.2
AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-P... 28 6.2
>BT015988-1|AAV36873.1| 238|Drosophila melanogaster RE57173p
protein.
Length = 238
Score = 90.6 bits (215), Expect = 1e-18
Identities = 40/107 (37%), Positives = 66/107 (61%)
Query: 10 WYARLSPKHGVSLPPYNHVVQVGDPTLRKVSEPVPIENIKTKEIQTLILKLRFVMNKYKS 69
WY L +LPPYNH Q+GDP LR+ + VP E++ + EI+ ++ ++ V+ K+
Sbjct: 33 WYQHLWTTERTNLPPYNHFTQIGDPVLRQQAALVPKEHMASPEIKAIVERMVKVLRKFDC 92
Query: 70 VGMSAPQIGVNMRIFVMQLNPLQLANVPQAIVKSRGMEVIPFTVRYN 116
VG++APQIGV++RI M+ +P+A+ ++R M +P T+ N
Sbjct: 93 VGIAAPQIGVSLRIIAMEFKGRIRKELPEAVYQARQMSELPLTIFIN 139
Score = 76.6 bits (180), Expect = 2e-14
Identities = 30/56 (53%), Positives = 38/56 (67%)
Query: 119 GNPTSNTYRDWAARVAQHEIEHLDGKLYVDIMDRKTMSCVCWEEVNLSKGKLAIPF 174
GN + W AR+AQHE++HL+GKLY D MDR T +C CWE VN G++ IPF
Sbjct: 181 GNQSELALSGWNARIAQHEMDHLEGKLYTDHMDRSTFACTCWEAVNTKSGRVEIPF 236
>AE014297-1176|AAF54540.2| 238|Drosophila melanogaster CG31278-PA
protein.
Length = 238
Score = 90.6 bits (215), Expect = 1e-18
Identities = 40/107 (37%), Positives = 66/107 (61%)
Query: 10 WYARLSPKHGVSLPPYNHVVQVGDPTLRKVSEPVPIENIKTKEIQTLILKLRFVMNKYKS 69
WY L +LPPYNH Q+GDP LR+ + VP E++ + EI+ ++ ++ V+ K+
Sbjct: 33 WYQHLWTTERTNLPPYNHFTQIGDPVLRQQAALVPKEHMASPEIKAIVERMVKVLRKFDC 92
Query: 70 VGMSAPQIGVNMRIFVMQLNPLQLANVPQAIVKSRGMEVIPFTVRYN 116
VG++APQIGV++RI M+ +P+A+ ++R M +P T+ N
Sbjct: 93 VGIAAPQIGVSLRIIAMEFKGRIRKELPEAVYQARQMSELPLTIFIN 139
Score = 76.6 bits (180), Expect = 2e-14
Identities = 30/56 (53%), Positives = 38/56 (67%)
Query: 119 GNPTSNTYRDWAARVAQHEIEHLDGKLYVDIMDRKTMSCVCWEEVNLSKGKLAIPF 174
GN + W AR+AQHE++HL+GKLY D MDR T +C CWE VN G++ IPF
Sbjct: 181 GNQSELALSGWNARIAQHEMDHLEGKLYTDHMDRSTFACTCWEAVNTKSGRVEIPF 236
>BT022698-1|AAY55114.1| 206|Drosophila melanogaster IP07194p
protein.
Length = 206
Score = 80.2 bits (189), Expect = 1e-15
Identities = 39/105 (37%), Positives = 60/105 (57%)
Query: 14 LSPKHGVSLPPYNHVVQVGDPTLRKVSEPVPIENIKTKEIQTLILKLRFVMNKYKSVGMS 73
L P +S PPY H Q+GDP LR+ +E VP E+I ++EI +I + V+ Y VG++
Sbjct: 5 LLPTRIMSAPPYRHFTQIGDPVLRQRAEEVPPEDIDSREINQIIDGMVKVLRHYDCVGVA 64
Query: 74 APQIGVNMRIFVMQLNPLQLANVPQAIVKSRGMEVIPFTVRYNED 118
APQ+G+ +RI VM+ + I + R M ++P V N +
Sbjct: 65 APQVGIPLRIIVMEFREGKQEQFKPEIYEERKMSILPLAVFINPE 109
Score = 67.7 bits (158), Expect = 8e-12
Identities = 25/56 (44%), Positives = 39/56 (69%)
Query: 119 GNPTSNTYRDWAARVAQHEIEHLDGKLYVDIMDRKTMSCVCWEEVNLSKGKLAIPF 174
G P+ W AR+AQHE++HL+G +Y+D MD T +C+ WE++N ++G+ AI F
Sbjct: 149 GTPSEMELEGWNARIAQHEVDHLNGTIYMDRMDLSTFNCILWEQINAAEGRSAIWF 204
>AE014297-1177|AAN13481.1| 196|Drosophila melanogaster CG31373-PA
protein.
Length = 196
Score = 78.6 bits (185), Expect = 4e-15
Identities = 37/99 (37%), Positives = 58/99 (58%)
Query: 20 VSLPPYNHVVQVGDPTLRKVSEPVPIENIKTKEIQTLILKLRFVMNKYKSVGMSAPQIGV 79
+S PPY H Q+GDP LR+ +E VP E+I ++EI +I + V+ Y VG++APQ+G+
Sbjct: 1 MSAPPYRHFTQIGDPVLRQRAEEVPPEDIDSREINQIIDGMVKVLRHYDCVGVAAPQVGI 60
Query: 80 NMRIFVMQLNPLQLANVPQAIVKSRGMEVIPFTVRYNED 118
+RI VM+ + I + R M ++P V N +
Sbjct: 61 PLRIIVMEFREGKQEQFKPEIYEERKMSILPLAVFINPE 99
Score = 67.7 bits (158), Expect = 8e-12
Identities = 25/56 (44%), Positives = 39/56 (69%)
Query: 119 GNPTSNTYRDWAARVAQHEIEHLDGKLYVDIMDRKTMSCVCWEEVNLSKGKLAIPF 174
G P+ W AR+AQHE++HL+G +Y+D MD T +C+ WE++N ++G+ AI F
Sbjct: 139 GTPSEMELEGWNARIAQHEVDHLNGTIYMDRMDLSTFNCILWEQINAAEGRSAIWF 194
>AY119153-1|AAM51013.1| 724|Drosophila melanogaster RE62284p
protein.
Length = 724
Score = 31.5 bits (68), Expect = 0.67
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 10 WYARLSPKHGVSLPPYNHVVQVGDPTLRKVSEPVPIENIK 49
WYARLSP H V Y + PT+ ++ + +PI IK
Sbjct: 576 WYARLSPNHKVI--HYGDCDEKTIPTMEELPKKLPISEIK 613
>AF417860-1|AAL38511.1| 724|Drosophila melanogaster PH domain
protein CED-12 protein.
Length = 724
Score = 31.5 bits (68), Expect = 0.67
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 10 WYARLSPKHGVSLPPYNHVVQVGDPTLRKVSEPVPIENIK 49
WYARLSP H V Y + PT+ ++ + +PI IK
Sbjct: 576 WYARLSPNHKVI--HYGDCDEKTIPTMEELPKKLPISEIK 613
>AE014134-2158|AAF53164.1| 724|Drosophila melanogaster CG5336-PA
protein.
Length = 724
Score = 31.5 bits (68), Expect = 0.67
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 10 WYARLSPKHGVSLPPYNHVVQVGDPTLRKVSEPVPIENIK 49
WYARLSP H V Y + PT+ ++ + +PI IK
Sbjct: 576 WYARLSPNHKVI--HYGDCDEKTIPTMEELPKKLPISEIK 613
>AE014134-886|AAZ66447.1| 7744|Drosophila melanogaster CG33715-PB,
isoform B protein.
Length = 7744
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 17 KHGVSLPPYNHVVQVGDPTLRKVSEPVPIENIKTKEIQTLILKLRFVMNKYKSVGMSA 74
+HG+ Y H+VQ D PI N+ K+IQ K+ +N Y+ +SA
Sbjct: 6945 QHGID---YEHLVQDLDEHKIFFGNEAPIRNLVHKQIQEAADKIWSSLNNYEQSELSA 6999
>AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-PD,
isoform D protein.
Length = 11707
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 17 KHGVSLPPYNHVVQVGDPTLRKVSEPVPIENIKTKEIQTLILKLRFVMNKYKSVGMSA 74
+HG+ Y H+VQ D PI N+ K+IQ K+ +N Y+ +SA
Sbjct: 6945 QHGID---YEHLVQDLDEHKIFFGNEAPIRNLVHKQIQEAADKIWSSLNNYEQSELSA 6999
Database: fruitfly
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 24,830,863
Number of sequences in database: 52,641
Lambda K H
0.320 0.135 0.406
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,660,123
Number of Sequences: 52641
Number of extensions: 335063
Number of successful extensions: 869
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 861
Number of HSP's gapped (non-prelim): 13
length of query: 177
length of database: 24,830,863
effective HSP length: 80
effective length of query: 97
effective length of database: 20,619,583
effective search space: 2000099551
effective search space used: 2000099551
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 59 (27.9 bits)
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