GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002545-TA|BGIBMGA002545-PA|undefined
         (125 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF399517-1|AAK95002.1|  216|Homo sapiens olfactory receptor prot...    30   1.9  
AB065835-1|BAC06054.1|  319|Homo sapiens seven transmembrane hel...    30   1.9  

>AF399517-1|AAK95002.1|  216|Homo sapiens olfactory receptor
           protein.
          Length = 216

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)

Query: 2   CRTVFSANIMLDTFVLVILMLAMVNSENDFYGLCSQMSSVLVTVVLMAF 50
           C  +FS +I+L +++ +++ +  +NS    Y   S  SS L TVV+M +
Sbjct: 138 CNLLFSLSIVLISYMFILVAILRMNSRKGRYKAFSTCSSHL-TVVIMFY 185


>AB065835-1|BAC06054.1|  319|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 319

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)

Query: 2   CRTVFSANIMLDTFVLVILMLAMVNSENDFYGLCSQMSSVLVTVVLMAF 50
           C  +FS +I+L +++ +++ +  +NS    Y   S  SS L TVV+M +
Sbjct: 211 CNLLFSLSIVLISYMFILVAILRMNSRKGRYKAFSTCSSHL-TVVIMFY 258


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.326    0.133    0.391 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,605,967
Number of Sequences: 224733
Number of extensions: 437966
Number of successful extensions: 679
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 677
Number of HSP's gapped (non-prelim): 2
length of query: 125
length of database: 73,234,838
effective HSP length: 81
effective length of query: 44
effective length of database: 55,031,465
effective search space: 2421384460
effective search space used: 2421384460
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 59 (27.9 bits)