GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002545-TA|BGIBMGA002545-PA|undefined
         (125 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF156880-1|AAD39006.1|  385|Drosophila melanogaster odorant rece...    32   0.19 
AE013599-1236|AAF58695.1|  385|Drosophila melanogaster CG13225-P...    32   0.19 
AE014297-3248|AAF56076.1|  387|Drosophila melanogaster CG17241-P...    28   3.1  
AY122187-1|AAM52699.1|  826|Drosophila melanogaster LD43341p pro...    28   4.1  
AY119072-1|AAM50932.1|  747|Drosophila melanogaster LP08967p pro...    28   4.1  
AE014134-2282|AAF53246.1|  747|Drosophila melanogaster CG5204-PA...    28   4.1  
AE013599-1361|AAF58607.3|  779|Drosophila melanogaster CG8981-PA...    28   4.1  
AE013599-1360|AAF58605.3|  826|Drosophila melanogaster CG8981-PB...    28   4.1  

>AF156880-1|AAD39006.1|  385|Drosophila melanogaster odorant
           receptor DOR24 protein.
          Length = 385

 Score = 32.3 bits (70), Expect = 0.19
 Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 6/89 (6%)

Query: 39  SSVLVTVVLMAFFMWTAGD-INVQASQLPDAIYGSGWY---NCRGKSSARIRSLVTISMN 94
           +S + T+++ A+     G+ +  +++    AIY S W+      G S++  RSL+ ISM 
Sbjct: 289 ASFIATIIIQAYIYCYCGENLKTESASFEWAIYDSPWHESLGAGGASTSICRSLL-ISMM 347

Query: 95  KAQVILTRMYGSNKQSNYNMFSGVFRVQM 123
           +A     R+ G   ++N   FS + R  M
Sbjct: 348 RAHRGF-RITGYFFEANMEAFSSIVRTAM 375


>AE013599-1236|AAF58695.1|  385|Drosophila melanogaster CG13225-PA
           protein.
          Length = 385

 Score = 32.3 bits (70), Expect = 0.19
 Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 6/89 (6%)

Query: 39  SSVLVTVVLMAFFMWTAGD-INVQASQLPDAIYGSGWY---NCRGKSSARIRSLVTISMN 94
           +S + T+++ A+     G+ +  +++    AIY S W+      G S++  RSL+ ISM 
Sbjct: 289 ASFIATIIIQAYIYCYCGENLKTESASFEWAIYDSPWHESLGAGGASTSICRSLL-ISMM 347

Query: 95  KAQVILTRMYGSNKQSNYNMFSGVFRVQM 123
           +A     R+ G   ++N   FS + R  M
Sbjct: 348 RAHRGF-RITGYFFEANMEAFSSIVRTAM 375


>AE014297-3248|AAF56076.1|  387|Drosophila melanogaster CG17241-PA
           protein.
          Length = 387

 Score = 28.3 bits (60), Expect = 3.1
 Identities = 11/38 (28%), Positives = 23/38 (60%), Gaps = 2/38 (5%)

Query: 43  VTVVLMAFFM--WTAGDINVQASQLPDAIYGSGWYNCR 78
           V+V+++  ++  +   +I V A+QL + +Y + W  CR
Sbjct: 298 VSVMILQIYLPCYYGNEITVYANQLTNEVYHTNWLECR 335


>AY122187-1|AAM52699.1|  826|Drosophila melanogaster LD43341p
           protein.
          Length = 826

 Score = 27.9 bits (59), Expect = 4.1
 Identities = 12/32 (37%), Positives = 21/32 (65%)

Query: 78  RGKSSARIRSLVTISMNKAQVILTRMYGSNKQ 109
           +GKS  RIR+LV  +M++ Q+ + R  G+  +
Sbjct: 795 KGKSRTRIRTLVHTNMHQEQINVIRKVGNTTE 826


>AY119072-1|AAM50932.1|  747|Drosophila melanogaster LP08967p
           protein.
          Length = 747

 Score = 27.9 bits (59), Expect = 4.1
 Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 1/75 (1%)

Query: 50  FFMWTAGDINVQASQLPDAIYGSGWYNCRGKSSARIRSLVTISMNKAQVILTRMYGSNKQ 109
           F +   G +N +  +     Y S W     K   R+++L   S N+AQV++    G    
Sbjct: 553 FHVHIVGHLNRKPFECSLCAYRSNWRWDITKH-IRLKALRDRSHNQAQVLMNDETGRRNY 611

Query: 110 SNYNMFSGVFRVQME 124
           + YN +  + +V  E
Sbjct: 612 AKYNQYLTMMKVSAE 626


>AE014134-2282|AAF53246.1|  747|Drosophila melanogaster CG5204-PA
           protein.
          Length = 747

 Score = 27.9 bits (59), Expect = 4.1
 Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 1/75 (1%)

Query: 50  FFMWTAGDINVQASQLPDAIYGSGWYNCRGKSSARIRSLVTISMNKAQVILTRMYGSNKQ 109
           F +   G +N +  +     Y S W     K   R+++L   S N+AQV++    G    
Sbjct: 553 FHVHIVGHLNRKPFECSLCAYRSNWRWDITKH-IRLKALRDRSHNQAQVLMNDETGRRNY 611

Query: 110 SNYNMFSGVFRVQME 124
           + YN +  + +V  E
Sbjct: 612 AKYNQYLTMMKVSAE 626


>AE013599-1361|AAF58607.3|  779|Drosophila melanogaster CG8981-PA,
           isoform A protein.
          Length = 779

 Score = 27.9 bits (59), Expect = 4.1
 Identities = 12/32 (37%), Positives = 21/32 (65%)

Query: 78  RGKSSARIRSLVTISMNKAQVILTRMYGSNKQ 109
           +GKS  RIR+LV  +M++ Q+ + R  G+  +
Sbjct: 748 KGKSRTRIRTLVHTNMHQEQINVIRKVGNTTE 779


>AE013599-1360|AAF58605.3|  826|Drosophila melanogaster CG8981-PB,
           isoform B protein.
          Length = 826

 Score = 27.9 bits (59), Expect = 4.1
 Identities = 12/32 (37%), Positives = 21/32 (65%)

Query: 78  RGKSSARIRSLVTISMNKAQVILTRMYGSNKQ 109
           +GKS  RIR+LV  +M++ Q+ + R  G+  +
Sbjct: 795 KGKSRTRIRTLVHTNMHQEQINVIRKVGNTTE 826


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.326    0.133    0.391 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,590,751
Number of Sequences: 52641
Number of extensions: 135229
Number of successful extensions: 580
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 576
Number of HSP's gapped (non-prelim): 8
length of query: 125
length of database: 24,830,863
effective HSP length: 77
effective length of query: 48
effective length of database: 20,777,506
effective search space: 997320288
effective search space used: 997320288
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 56 (26.6 bits)