GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002542-TA|BGIBMGA002542-PA|IPR002452|Alpha tubulin,
IPR000217|Tubulin, IPR003008|Tubulin/FtsZ, GTPase,
IPR008280|Tubulin/FtsZ, C-terminal
         (449 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    25   1.1  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    24   2.5  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    24   2.5  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    24   2.5  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    23   4.4  

>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 25.0 bits (52), Expect = 1.1
 Identities = 11/20 (55%), Positives = 12/20 (60%)

Query: 115 DVVLDRIRKLADQCTGLQGF 134
           DVV    RK A+ C  LQGF
Sbjct: 233 DVVASNSRKTAEMCYKLQGF 252


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.8 bits (49), Expect = 2.5
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 4/38 (10%)

Query: 90  QLITGKEDAANNYARG----HYTIGKEIVDVVLDRIRK 123
           QL+T  +D  N Y       +YT+ +++ D V  +IRK
Sbjct: 335 QLLTRLDDNWNKYIPAILYYNYTVDRDLQDEVSQKIRK 372


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.8 bits (49), Expect = 2.5
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 4/38 (10%)

Query: 90  QLITGKEDAANNYARG----HYTIGKEIVDVVLDRIRK 123
           QL+T  +D  N Y       +YT+ +++ D V  +IRK
Sbjct: 335 QLLTRLDDNWNKYIPAILYYNYTVDRDLQDEVSQKIRK 372


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.8 bits (49), Expect = 2.5
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 4/38 (10%)

Query: 90  QLITGKEDAANNYARG----HYTIGKEIVDVVLDRIRK 123
           QL+T  +D  N Y       +YT+ +++ D V  +IRK
Sbjct: 335 QLLTRLDDNWNKYIPAILYYNYTVDRDLQDEVSQKIRK 372


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 23.0 bits (47), Expect = 4.4
 Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 3/30 (10%)

Query: 101 NYARGHYTIGKEIVDVVLDRIRKLADQCTG 130
           +YAR     G  IVD+ LD  R L   CTG
Sbjct: 392 SYARAKGLGGIAIVDITLDDFRGL---CTG 418


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.136    0.415 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,157
Number of Sequences: 317
Number of extensions: 4346
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 12
Number of HSP's gapped (non-prelim): 5
length of query: 449
length of database: 114,650
effective HSP length: 59
effective length of query: 390
effective length of database: 95,947
effective search space: 37419330
effective search space used: 37419330
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)