Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002540-TA|BGIBMGA002540-PA|IPR002937|Amine oxidase,
IPR001220|Legume lectin, beta domain
(305 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U26446-1|AAA67690.1| 477|Homo sapiens protoporphyrinogen oxidas... 182 1e-45
D38537-1|BAA07538.1| 477|Homo sapiens protoporphyrinogen oxidas... 182 1e-45
BC002357-1|AAH02357.1| 477|Homo sapiens protoporphyrinogen oxid... 182 1e-45
AL590714-4|CAH72144.1| 477|Homo sapiens protoporphyrinogen oxid... 182 1e-45
AY032688-1|AAK50375.1| 148|Homo sapiens protoporphyrinogen oxid... 103 8e-22
AF321823-1|AAK69609.1| 62|Homo sapiens truncated protoporphyri... 42 0.003
AY032687-1|AAK50376.1| 205|Homo sapiens protoporphyrinogen oxid... 36 0.23
AF215864-1|AAG43995.1| 37|Homo sapiens mutant protoporphyrinog... 34 0.54
X85108-1|CAA59429.1| 1331|Homo sapiens alpha3b subunit of lamini... 32 2.2
X85107-1|CAA59428.1| 1238|Homo sapiens alpha3a subunit of lamini... 32 2.2
X84900-1|CAA59325.1| 1806|Homo sapiens alpha 3B chain of laminin... 32 2.2
L34155-1|AAA59483.1| 1713|Homo sapiens epiligrin alpha 3 subunit... 32 2.2
AY327115-1|AAQ72570.1| 3333|Homo sapiens laminin alpha 3 splice ... 32 2.2
AB208853-1|BAD92090.1| 1408|Homo sapiens Laminin alpha 3b chain ... 32 2.2
AB107369-1|BAD13428.1| 3333|Homo sapiens laminin alpha 3b chain ... 32 2.2
AY327116-1|AAQ72571.1| 3277|Homo sapiens laminin alpha 3 splice ... 31 6.7
AY327114-1|AAQ72569.1| 1668|Homo sapiens laminin alpha 3 splice ... 31 6.7
>U26446-1|AAA67690.1| 477|Homo sapiens protoporphyrinogen oxidase
protein.
Length = 477
Score = 182 bits (444), Expect = 1e-45
Identities = 104/303 (34%), Positives = 174/303 (57%), Gaps = 14/303 (4%)
Query: 4 GICAGDAKEISVKFLMKTLFEWEQTHGGVVKGLMKSLFSSKTGNELVLSDLARKAQEEKW 63
G+ AG+++E+S++ +LF+ EQTH ++ GL+ L + +T S L R+A E+W
Sbjct: 169 GVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLL--LGAGRTPQPD--SALIRQALAERW 224
Query: 64 SVYTIKGGLEMFPNKLQAHLKDNNVTMNLSTKVEAIEFVDSGSVSLNIQTGEKLSVNHVY 123
S ++++GGLEM P L+ HL V++ V + G ++++ L +HV
Sbjct: 225 SQWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLRDSS-LEADHVI 283
Query: 124 SSIPAYCLASLVQKQHPELAKTLKDIPFVTVGIVNL-YFATQKPLIKPAFGFLVPPIENS 182
S+IPA L+ L+ + LA+ L I V+V +VNL Y P+ FG LVP E+
Sbjct: 284 SAIPASVLSELLPAEAAPLARALSAITAVSVAVVNLQYQGAHLPV--QGFGHLVPSSEDP 341
Query: 183 PILGVVFDSCCMPDQNGTV----LTVMLGGRWFE--EKFGKNTTSENLYNIAVKEVGSIL 236
+LG+V+DS P+Q+G+ +TVMLGG W + E G + E A + + L
Sbjct: 342 GVLGIVYDSVAFPEQDGSPPGLRVTVMLGGSWLQTLEASGCVLSQELFQQRAQEAAATQL 401
Query: 237 DIKDKPTAFNVNILNRCIPQYVVGHYERVDEIRQYIKSNNLPISLIGSSYDGVGINDVIY 296
+K+ P+ V++ CIPQY +GH+++++ RQ++ ++ LP++L G+SY+GV +ND I
Sbjct: 402 GLKEMPSHCLVHLHKNCIPQYTLGHWQKLESARQFLTAHRLPLTLAGASYEGVAVNDCIE 461
Query: 297 SAK 299
S +
Sbjct: 462 SGR 464
>D38537-1|BAA07538.1| 477|Homo sapiens protoporphyrinogen oxidase
protein.
Length = 477
Score = 182 bits (444), Expect = 1e-45
Identities = 104/303 (34%), Positives = 174/303 (57%), Gaps = 14/303 (4%)
Query: 4 GICAGDAKEISVKFLMKTLFEWEQTHGGVVKGLMKSLFSSKTGNELVLSDLARKAQEEKW 63
G+ AG+++E+S++ +LF+ EQTH ++ GL+ L + +T S L R+A E+W
Sbjct: 169 GVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLL--LGAGRTPQPD--SALIRQALAERW 224
Query: 64 SVYTIKGGLEMFPNKLQAHLKDNNVTMNLSTKVEAIEFVDSGSVSLNIQTGEKLSVNHVY 123
S ++++GGLEM P L+ HL V++ V + G ++++ L +HV
Sbjct: 225 SQWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLRDSS-LEADHVI 283
Query: 124 SSIPAYCLASLVQKQHPELAKTLKDIPFVTVGIVNL-YFATQKPLIKPAFGFLVPPIENS 182
S+IPA L+ L+ + LA+ L I V+V +VNL Y P+ FG LVP E+
Sbjct: 284 SAIPASVLSELLPAEAAPLARALSAITAVSVAVVNLQYQGAHLPV--QGFGHLVPSSEDP 341
Query: 183 PILGVVFDSCCMPDQNGTV----LTVMLGGRWFE--EKFGKNTTSENLYNIAVKEVGSIL 236
+LG+V+DS P+Q+G+ +TVMLGG W + E G + E A + + L
Sbjct: 342 GVLGIVYDSVAFPEQDGSPPGLRVTVMLGGSWLQTLEASGCVLSQELFQQRAQEAAATQL 401
Query: 237 DIKDKPTAFNVNILNRCIPQYVVGHYERVDEIRQYIKSNNLPISLIGSSYDGVGINDVIY 296
+K+ P+ V++ CIPQY +GH+++++ RQ++ ++ LP++L G+SY+GV +ND I
Sbjct: 402 GLKEMPSHCLVHLHKNCIPQYTLGHWQKLESARQFLTAHRLPLTLAGASYEGVAVNDCIE 461
Query: 297 SAK 299
S +
Sbjct: 462 SGR 464
>BC002357-1|AAH02357.1| 477|Homo sapiens protoporphyrinogen oxidase
protein.
Length = 477
Score = 182 bits (444), Expect = 1e-45
Identities = 104/303 (34%), Positives = 174/303 (57%), Gaps = 14/303 (4%)
Query: 4 GICAGDAKEISVKFLMKTLFEWEQTHGGVVKGLMKSLFSSKTGNELVLSDLARKAQEEKW 63
G+ AG+++E+S++ +LF+ EQTH ++ GL+ L + +T S L R+A E+W
Sbjct: 169 GVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLL--LGAGRTPQPD--SALIRQALAERW 224
Query: 64 SVYTIKGGLEMFPNKLQAHLKDNNVTMNLSTKVEAIEFVDSGSVSLNIQTGEKLSVNHVY 123
S ++++GGLEM P L+ HL V++ V + G ++++ L +HV
Sbjct: 225 SQWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLRDSS-LEADHVI 283
Query: 124 SSIPAYCLASLVQKQHPELAKTLKDIPFVTVGIVNL-YFATQKPLIKPAFGFLVPPIENS 182
S+IPA L+ L+ + LA+ L I V+V +VNL Y P+ FG LVP E+
Sbjct: 284 SAIPASVLSELLPAEAAPLARALSAITAVSVAVVNLQYQGAHLPV--QGFGHLVPSSEDP 341
Query: 183 PILGVVFDSCCMPDQNGTV----LTVMLGGRWFE--EKFGKNTTSENLYNIAVKEVGSIL 236
+LG+V+DS P+Q+G+ +TVMLGG W + E G + E A + + L
Sbjct: 342 GVLGIVYDSVAFPEQDGSPPGLRVTVMLGGSWLQTLEASGCVLSQELFQQRAQEAAATQL 401
Query: 237 DIKDKPTAFNVNILNRCIPQYVVGHYERVDEIRQYIKSNNLPISLIGSSYDGVGINDVIY 296
+K+ P+ V++ CIPQY +GH+++++ RQ++ ++ LP++L G+SY+GV +ND I
Sbjct: 402 GLKEMPSHCLVHLHKNCIPQYTLGHWQKLESARQFLTAHRLPLTLAGASYEGVAVNDCIE 461
Query: 297 SAK 299
S +
Sbjct: 462 SGR 464
>AL590714-4|CAH72144.1| 477|Homo sapiens protoporphyrinogen oxidase
protein.
Length = 477
Score = 182 bits (444), Expect = 1e-45
Identities = 104/303 (34%), Positives = 174/303 (57%), Gaps = 14/303 (4%)
Query: 4 GICAGDAKEISVKFLMKTLFEWEQTHGGVVKGLMKSLFSSKTGNELVLSDLARKAQEEKW 63
G+ AG+++E+S++ +LF+ EQTH ++ GL+ L + +T S L R+A E+W
Sbjct: 169 GVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLL--LGAGRTPQPD--SALIRQALAERW 224
Query: 64 SVYTIKGGLEMFPNKLQAHLKDNNVTMNLSTKVEAIEFVDSGSVSLNIQTGEKLSVNHVY 123
S ++++GGLEM P L+ HL V++ V + G ++++ L +HV
Sbjct: 225 SQWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLRDSS-LEADHVI 283
Query: 124 SSIPAYCLASLVQKQHPELAKTLKDIPFVTVGIVNL-YFATQKPLIKPAFGFLVPPIENS 182
S+IPA L+ L+ + LA+ L I V+V +VNL Y P+ FG LVP E+
Sbjct: 284 SAIPASVLSELLPAEAAPLARALSAITAVSVAVVNLQYQGAHLPV--QGFGHLVPSSEDP 341
Query: 183 PILGVVFDSCCMPDQNGTV----LTVMLGGRWFE--EKFGKNTTSENLYNIAVKEVGSIL 236
+LG+V+DS P+Q+G+ +TVMLGG W + E G + E A + + L
Sbjct: 342 GVLGIVYDSVAFPEQDGSPPGLRVTVMLGGSWLQTLEASGCVLSQELFQQRAQEAAATQL 401
Query: 237 DIKDKPTAFNVNILNRCIPQYVVGHYERVDEIRQYIKSNNLPISLIGSSYDGVGINDVIY 296
+K+ P+ V++ CIPQY +GH+++++ RQ++ ++ LP++L G+SY+GV +ND I
Sbjct: 402 GLKEMPSHCLVHLHKNCIPQYTLGHWQKLESARQFLTAHRLPLTLAGASYEGVAVNDCIE 461
Query: 297 SAK 299
S +
Sbjct: 462 SGR 464
>AY032688-1|AAK50375.1| 148|Homo sapiens protoporphyrinogen oxidase
protein.
Length = 148
Score = 103 bits (247), Expect = 8e-22
Identities = 50/134 (37%), Positives = 83/134 (61%), Gaps = 6/134 (4%)
Query: 172 FGFLVPPIENSPILGVVFDSCCMPDQNGTV----LTVMLGGRWFE--EKFGKNTTSENLY 225
FG LVP E+ +LG+V+DS P+Q+G+ +TVMLGG W + E G + E
Sbjct: 2 FGHLVPSSEDPGVLGIVYDSVAFPEQDGSPPGLRVTVMLGGSWLQTLEASGCVLSQELFQ 61
Query: 226 NIAVKEVGSILDIKDKPTAFNVNILNRCIPQYVVGHYERVDEIRQYIKSNNLPISLIGSS 285
A + + L +K+ P+ V++ CIPQY +GH+++++ RQ++ ++ LP++L G+S
Sbjct: 62 QRAQEAAATQLGLKEMPSHCLVHLHKNCIPQYTLGHWQKLESARQFLTAHRLPLTLAGAS 121
Query: 286 YDGVGINDVIYSAK 299
Y+GV +ND I S +
Sbjct: 122 YEGVAVNDCIESGR 135
>AF321823-1|AAK69609.1| 62|Homo sapiens truncated
protoporphyrinogen oxidase protein.
Length = 62
Score = 41.9 bits (94), Expect = 0.003
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 52 SDLARKAQEEKWSVYTIKGGLEMFPNKLQAHLKDNNVTM 90
S L R+A E+WS ++++GGLEM P L+ HL V++
Sbjct: 7 SALIRQALAERWSQWSLRGGLEMLPQALETHLTSRGVSV 45
>AY032687-1|AAK50376.1| 205|Homo sapiens protoporphyrinogen oxidase
protein.
Length = 205
Score = 35.5 bits (78), Expect = 0.23
Identities = 13/34 (38%), Positives = 25/34 (73%)
Query: 4 GICAGDAKEISVKFLMKTLFEWEQTHGGVVKGLM 37
G+ AG+++E+S++ +LF+ EQTH ++ GL+
Sbjct: 169 GVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLL 202
>AF215864-1|AAG43995.1| 37|Homo sapiens mutant protoporphyrinogen
oxidase protein.
Length = 37
Score = 34.3 bits (75), Expect = 0.54
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 172 FGFLVPPIENSPILGVVFDSCCMPDQNGT 200
FG LVP E+ +LG+V DS P+Q+G+
Sbjct: 2 FGHLVPSSEDPGVLGIVCDSVAFPEQDGS 30
>X85108-1|CAA59429.1| 1331|Homo sapiens alpha3b subunit of laminin 5
protein.
Length = 1331
Score = 32.3 bits (70), Expect = 2.2
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 9 DAKEISVKFLMKTLFEWEQTHGGVVKGLMKSLFSSKTGNELVLSDLARKAQE 60
+A + + L+ + W++TH G GL S+ S E LSDL + QE
Sbjct: 466 EADKRESQLLLNRIRTWQKTHQGENNGLANSIRDSLNEYEAKLSDLRARLQE 517
>X85107-1|CAA59428.1| 1238|Homo sapiens alpha3a subunit of laminin 5
protein.
Length = 1238
Score = 32.3 bits (70), Expect = 2.2
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 9 DAKEISVKFLMKTLFEWEQTHGGVVKGLMKSLFSSKTGNELVLSDLARKAQE 60
+A + + L+ + W++TH G GL S+ S E LSDL + QE
Sbjct: 373 EADKRESQLLLNRIRTWQKTHQGENNGLANSIRDSLNEYEAKLSDLRARLQE 424
>X84900-1|CAA59325.1| 1806|Homo sapiens alpha 3B chain of laminin-5
protein.
Length = 1806
Score = 32.3 bits (70), Expect = 2.2
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 9 DAKEISVKFLMKTLFEWEQTHGGVVKGLMKSLFSSKTGNELVLSDLARKAQE 60
+A + + L+ + W++TH G GL S+ S E LSDL + QE
Sbjct: 466 EADKRESQLLLNRIRTWQKTHQGENNGLANSIRDSLNEYEAKLSDLRARLQE 517
>L34155-1|AAA59483.1| 1713|Homo sapiens epiligrin alpha 3 subunit
protein.
Length = 1713
Score = 32.3 bits (70), Expect = 2.2
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 9 DAKEISVKFLMKTLFEWEQTHGGVVKGLMKSLFSSKTGNELVLSDLARKAQE 60
+A + + L+ + W++TH G GL S+ S E LSDL + QE
Sbjct: 373 EADKRESQLLLNRIRTWQKTHQGENNGLANSIRDSLNEYEAKLSDLRARLQE 424
>AY327115-1|AAQ72570.1| 3333|Homo sapiens laminin alpha 3 splice
variant b1 protein.
Length = 3333
Score = 32.3 bits (70), Expect = 2.2
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 9 DAKEISVKFLMKTLFEWEQTHGGVVKGLMKSLFSSKTGNELVLSDLARKAQE 60
+A + + L+ + W++TH G GL S+ S E LSDL + QE
Sbjct: 1993 EADKRESQLLLNRIRTWQKTHQGENNGLANSIRDSLNEYEAKLSDLRARLQE 2044
>AB208853-1|BAD92090.1| 1408|Homo sapiens Laminin alpha 3b chain
variant protein.
Length = 1408
Score = 32.3 bits (70), Expect = 2.2
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 9 DAKEISVKFLMKTLFEWEQTHGGVVKGLMKSLFSSKTGNELVLSDLARKAQE 60
+A + + L+ + W++TH G GL S+ S E LSDL + QE
Sbjct: 68 EADKRESQLLLNRIRTWQKTHQGENNGLANSIRDSLNEYEAKLSDLRARLQE 119
>AB107369-1|BAD13428.1| 3333|Homo sapiens laminin alpha 3b chain
protein.
Length = 3333
Score = 32.3 bits (70), Expect = 2.2
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 9 DAKEISVKFLMKTLFEWEQTHGGVVKGLMKSLFSSKTGNELVLSDLARKAQE 60
+A + + L+ + W++TH G GL S+ S E LSDL + QE
Sbjct: 1993 EADKRESQLLLNRIRTWQKTHQGENNGLANSIRDSLNEYEAKLSDLRARLQE 2044
>AY327116-1|AAQ72571.1| 3277|Homo sapiens laminin alpha 3 splice
variant b2 protein.
Length = 3277
Score = 30.7 bits (66), Expect = 6.7
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 18 LMKTLFEWEQTHGGVVKGLMKSLFSSKTGNELVLSDLARKAQE 60
++ + W++TH G GL S+ S E LSDL + QE
Sbjct: 1946 MLNRIRTWQKTHQGENNGLANSIRDSLNEYEAKLSDLRARLQE 1988
>AY327114-1|AAQ72569.1| 1668|Homo sapiens laminin alpha 3 splice
variant a protein.
Length = 1668
Score = 30.7 bits (66), Expect = 6.7
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 18 LMKTLFEWEQTHGGVVKGLMKSLFSSKTGNELVLSDLARKAQE 60
++ + W++TH G GL S+ S E LSDL + QE
Sbjct: 337 MLNRIRTWQKTHQGENNGLANSIRDSLNEYEAKLSDLRARLQE 379
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.317 0.135 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 43,393,919
Number of Sequences: 224733
Number of extensions: 1748624
Number of successful extensions: 3153
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3112
Number of HSP's gapped (non-prelim): 19
length of query: 305
length of database: 73,234,838
effective HSP length: 90
effective length of query: 215
effective length of database: 53,008,868
effective search space: 11396906620
effective search space used: 11396906620
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 65 (30.3 bits)
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