GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002539-TA|BGIBMGA002539-PA|IPR002490|ATPase, V0/A0
complex, 116-kDa subunit
         (615 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase ...   761   0.0  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...   708   0.0  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            27   1.1  

>AJ439060-7|CAD27758.1|  849|Anopheles gambiae putative V-ATPase
           protein.
          Length = 849

 Score =  761 bits (1881), Expect = 0.0
 Identities = 371/662 (56%), Positives = 459/662 (69%), Gaps = 49/662 (7%)

Query: 1   MLWRACRGNVFLRQAEIDTPLEDPSSSDQVYKSVFIIFFQGDQLKTRVKKICEGFRATLY 60
           MLWR  RGN+FLRQ E++ PLEDP++ ++++K+VF+ FFQG+QLK R+KK+C G+  +LY
Sbjct: 189 MLWRISRGNIFLRQVELEEPLEDPATGNEIFKTVFVAFFQGEQLKARIKKVCTGYHVSLY 248

Query: 61  PCPESPADRREMAMGVMTRIEDLNTVLGQTQDHRHRVLVAAAKNIKNWFVKVRKIKAIYH 120
           PCP S ++R +M  GV TR+EDL  VL QTQDHR  VL + AK + +W + V+K+KAIYH
Sbjct: 249 PCPSSGSERTDMVKGVCTRLEDLRMVLNQTQDHRAIVLASVAKELFSWRIMVKKMKAIYH 308

Query: 121 TLNLFNLDVTQKCLIAECWVPALDMETIQLALRRGTERSGSSVPPILNRMETIEDPPTYN 180
           TLNLFN+DVT+KCLI ECWVP  D+  +Q AL  G+   GS++P  LN ++T E PPTYN
Sbjct: 309 TLNLFNMDVTKKCLIGECWVPVPDLPKVQKALSDGSAAVGSTIPSFLNVIDTNEAPPTYN 368

Query: 181 RTNKFTSAFQHLIYAYGVATYREVNPAPYTVITFPFLFAVMFGDLGHGAIMAAFGFWMCY 240
           RTNKFT  FQ+LI AYG+A+YRE NPA YT+ITFPFLF +MFGDLGHG IMA FG WM  
Sbjct: 369 RTNKFTRGFQNLIDAYGIASYREANPALYTIITFPFLFGIMFGDLGHGMIMALFGLWMVT 428

Query: 241 KEKPLQAKKIDSEIWNIFFGGRYIILLMGLFSMYTGLIYNDIFSKSLNIFGSSWRNNYDG 300
            EK L AKK  +EIWNIFFGGRYIILLMGLFSMYTG +YNDIFSKS+NIFGS+W  NY+ 
Sbjct: 429 GEKKLGAKKSTNEIWNIFFGGRYIILLMGLFSMYTGFVYNDIFSKSMNIFGSAWSVNYNT 488

Query: 301 STXXXXXXXXXXPDSKDYLQYPYPFGIDPVWQLAEANKIIFMNGYKMKISIIIGVFHMLF 360
           ST          P S DY    YP G+DPVWQLA +NKIIF+N YKMK+SII GV HM+F
Sbjct: 489 STVMTNKDLTLNPGSTDYDTEIYPIGLDPVWQLA-SNKIIFLNSYKMKLSIIFGVVHMIF 547

Query: 361 GVCLSLWNHLYFKRRISIYVEFIPQILFLSLLFFYMVLLMFIKWTTYGA-------TPG- 412
           GVC+S+ NH +FK+RISI +EF+PQI+FL LLF YMV +MF+KW  Y A       TPG 
Sbjct: 548 GVCMSVVNHNFFKKRISIVLEFLPQIIFLVLLFAYMVFMMFMKWIAYTAKTDYQPRTPGC 607

Query: 413 ------------HFGSQDPVNNIVCALFQ-------LFVIVALLCVPIMLFGKPYFIMRE 453
                        F + +P +     +F+        FV +ALLC+P ML GKP+++M +
Sbjct: 608 APSVLIMFINMMLFKNSEPFHGCDEFMFEGQNELQRTFVFIALLCIPWMLLGKPFYLMFK 667

Query: 454 QKQRARQ-----------GH----------QPVXXXXXXXXXXXXPVPASGHHDEEITEV 492
           +K  +             GH            V            P P   H DE + E+
Sbjct: 668 RKNASPSLKEDNSLLSLIGHFFLQTPIPNNGDVHQGGDSNHTSSSPKPHDSHDDEPMAEI 727

Query: 493 FIHQAIHTIEFVLGSVSHTASYLRLWALSLAHAQLAEVAWNMLLRKGLMSNDYQGGIFLY 552
           FIHQAIHTIE+VL +VSHTASYLRLWALSLAHA+L+EV WNM+L  GL    Y+G I LY
Sbjct: 728 FIHQAIHTIEYVLSTVSHTASYLRLWALSLAHAELSEVLWNMVLSMGLKQTSYKGAIMLY 787

Query: 553 VVFAGWAAISVSILVLMEGLSAFLHTLRLHWVEFQSKFYGGEGYLFQPFSFEIILDSAGQ 612
            VF  W+  +++ILV+MEGLSAFLHTLRLHWVEF SKFY G GY FQPFSF++I+DS   
Sbjct: 788 FVFGAWSLFTLAILVMMEGLSAFLHTLRLHWVEFMSKFYEGLGYGFQPFSFKLIIDSDDD 847

Query: 613 AE 614
            E
Sbjct: 848 LE 849


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score =  708 bits (1751), Expect = 0.0
 Identities = 340/636 (53%), Positives = 443/636 (69%), Gaps = 41/636 (6%)

Query: 1   MLWRACRGNVFLRQAEIDTPLEDPSSSDQVYKSVFIIFFQGDQLKTRVKKICEGFRATLY 60
           MLWR  RGN+FLRQA ++  L DP + D V+K VF+ FFQG+QLK RVKK+C G+ A+LY
Sbjct: 181 MLWRVSRGNIFLRQATLEESLVDPKTGDSVHKIVFVAFFQGEQLKARVKKVCAGYHASLY 240

Query: 61  PCPESPADRREMAMGVMTRIEDLNTVLGQTQDHRHRVLVAAAKNIKNWFVKVRKIKAIYH 120
           PCP    +R EM  GV TRIEDL  VLGQTQD R RVL+  AK + NW + V+K+KAIYH
Sbjct: 241 PCPNEYNEREEMLRGVRTRIEDLKMVLGQTQDQRQRVLLNVAKEVPNWEIIVKKVKAIYH 300

Query: 121 TLNLFNLDVTQKCLIAECWVPALDMETIQLALRRGTERSGSSVPPILNRMETIEDPPTYN 180
           TLN+FN+DV++KCL  E WVP   ++ ++ AL  G+   GS+VP  LN + T EDPPTYN
Sbjct: 301 TLNMFNVDVSKKCLFGEAWVPTAGLQDVKTALVNGSAAVGSAVPSFLNIIATDEDPPTYN 360

Query: 181 RTNKFTSAFQHLIYAYGVATYREVNPAPYTVITFPFLFAVMFGDLGHGAIMAAFGFWMCY 240
           +TNKFT  FQ+LI +YG+ATYRE NPA YT+ITFPFLFA+MFGDLGHG I+   G WM  
Sbjct: 361 KTNKFTRGFQNLIESYGIATYREANPALYTIITFPFLFAIMFGDLGHGLILFLLGMWMVL 420

Query: 241 KEKPLQAKKIDSEIWNIFFGGRYIILLMGLFSMYTGLIYNDIFSKSLNIFGSSWRNNYDG 300
            EK L   K   EIW +FFGGRYIILLMG+FSMYTG +YND+FSK +NIFGS+W  NY+ 
Sbjct: 421 WEKTLDKNK--EEIWQLFFGGRYIILLMGIFSMYTGFVYNDVFSKGMNIFGSAWSVNYNT 478

Query: 301 STXXXXXXXXXXPDSKDYLQYPYPFGIDPVWQLAEANKIIFMNGYKMKISIIIGVFHMLF 360
           ST          P + DY +  Y +G+DP+W LA  NKIIF+N +KMK+SII GV HM+F
Sbjct: 479 STVMTNKELQLNP-TTDYSETVYWYGLDPLWMLA-TNKIIFLNSFKMKLSIIFGVVHMIF 536

Query: 361 GVCLSLWNHLYFKRRISIYVEFIPQILFLSLLFFYMVLLMFIKWTTYGAT-------PG- 412
           GVC+SL NH +F RR++I +EFIPQ++FL LLF YM  +MF KW  Y A        PG 
Sbjct: 537 GVCMSLVNHNHFNRRVNILLEFIPQMMFLVLLFAYMCFMMFFKWIMYSAVTDEDHLKPGC 596

Query: 413 ------------HFGSQDPVNNIVCALFQ-------LFVIVALLCVPIMLFGKPYFIMRE 453
                        F +Q+P++     +F+       +F+++ L+C+P +L  KP++IM +
Sbjct: 597 APSVLIMFINMMLFKNQEPLDTCKEFMFEGQDTLQVIFIVLGLICIPWLLLAKPFYIMFK 656

Query: 454 QKQRARQGHQPVXXXXXXXXXXXXPVPASGHHDEE-ITEVFIHQAIHTIEFVLGSVSHTA 512
           +K ++ +    V               +S HHD+E ++E+FIHQAIHTIE++L ++SHTA
Sbjct: 657 RKGKSTEHGSEVAHQSSS---------SSNHHDDEPMSEIFIHQAIHTIEYILSTISHTA 707

Query: 513 SYLRLWALSLAHAQLAEVAWNMLLRKGLMSNDYQGGIFLYVVFAGWAAISVSILVLMEGL 572
           SYLRLWALSLAHA+L+EV +NM+   GL ++ Y G I +++VF  W+ +++ ILV MEGL
Sbjct: 708 SYLRLWALSLAHAELSEVLYNMVFTIGLRNDSYVGAIMIWLVFWPWSVLTIGILVGMEGL 767

Query: 573 SAFLHTLRLHWVEFQSKFYGGEGYLFQPFSFEIILD 608
           SAFLHTLRLHWVEF SKFY G GY F+PFSF+ IL+
Sbjct: 768 SAFLHTLRLHWVEFMSKFYEGLGYAFKPFSFKAILE 803


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 27.5 bits (58), Expect = 1.1
 Identities = 16/54 (29%), Positives = 24/54 (44%)

Query: 125 FNLDVTQKCLIAECWVPALDMETIQLALRRGTERSGSSVPPILNRMETIEDPPT 178
           F  DV +   I EC+  AL++    + L        SS PP++  +     PPT
Sbjct: 709 FTDDVVRHPNIKECFRKALELMQRSIGLGGSGAGGPSSSPPVMESIPPPPKPPT 762


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.327    0.141    0.447 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 626,550
Number of Sequences: 2123
Number of extensions: 25283
Number of successful extensions: 98
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86
Number of HSP's gapped (non-prelim): 7
length of query: 615
length of database: 516,269
effective HSP length: 68
effective length of query: 547
effective length of database: 371,905
effective search space: 203432035
effective search space used: 203432035
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 51 (24.6 bits)