Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002538-TA|BGIBMGA002538-PA|IPR002490|ATPase, V0/A0
complex, 116-kDa subunit, IPR009053|Prefoldin
(166 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1250 + 35726115-35726255,35727435-35727479,35728570-357286... 111 4e-25
03_02_0381 + 7951360-7951509,7952125-7952169,7952625-7952744,795... 105 1e-23
10_02_0114 + 5431578-5431724,5432753-5432797,5433572-5433691,543... 101 2e-22
04_04_1523 - 34148407-34150224 31 0.62
07_03_0532 + 19171290-19171394,19173122-19173302,19173761-191742... 29 1.4
05_05_0348 + 24271764-24271898,24273055-24273144,24273205-242733... 29 1.9
10_08_0558 + 18756797-18756887,18757189-18757262,18759881-187600... 29 2.5
03_04_0110 - 17357323-17357403,17357487-17357595,17357737-173579... 29 2.5
06_03_1145 - 28000012-28000022,28000119-28000290,28000381-280004... 28 3.3
06_01_1173 + 10014391-10014678,10015478-10017245,10017333-100174... 28 3.3
02_01_0224 - 1461924-1462227,1462602-1462798,1463059-1463213,146... 28 3.3
01_01_1174 + 9348256-9349734 28 3.3
01_01_0568 - 4207812-4209587,4210056-4210291,4210647-4210793,421... 28 3.3
07_03_0541 + 19254455-19254666,19255053-19255207,19255420-192554... 28 4.4
06_01_0733 + 5405889-5405922,5405923-5405975,5406430-5406543,540... 27 5.8
02_04_0211 + 20957553-20957828,20957944-20958258,20962094-209628... 27 5.8
12_01_0978 + 9908001-9908175,9908538-9908619,9910793-9910904,991... 27 7.6
04_03_1002 - 21617339-21617362,21618476-21618565,21618755-216194... 27 7.6
04_01_0180 + 2034021-2034023,2034741-2035088 27 7.6
03_05_0754 + 27452203-27452242,27452360-27455611,27456480-274565... 27 7.6
03_02_0944 - 12603801-12604919 27 7.6
02_04_0481 + 23284296-23284448,23284553-23284753,23284855-232879... 27 7.6
02_01_0642 - 4803464-4805665,4806231-4806320 27 7.6
>01_06_1250 +
35726115-35726255,35727435-35727479,35728570-35728692,
35728804-35728911,35729247-35729360,35729440-35729613,
35729881-35729976,35730165-35730272,35730389-35730496,
35730595-35730743,35731255-35731408,35732487-35732647,
35733739-35733945,35733968-35734025,35734058-35734222,
35734305-35734388,35735670-35735863,35735952-35736011,
35736203-35736407
Length = 817
Score = 111 bits (266), Expect = 4e-25
Identities = 58/130 (44%), Positives = 82/130 (63%), Gaps = 4/130 (3%)
Query: 6 RSEEMTLCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDEMERKL 65
RSE+M QL + +E+A V+ LGELGL+QF+DLN D + FQR FVN+V+RC EM RKL
Sbjct: 14 RSEKMCFVQLIIPAESARLAVTYLGELGLLQFKDLNEDKSPFQRIFVNQVKRCSEMSRKL 73
Query: 66 RYLEKEIRRDGIPMLEIPGECPEAPQPREMIDLEATFEKLENELREVNQNAEALKRNYLE 125
R+ +I + G+ P P+ ++ +LEA + EN+L E+N N+E L + Y E
Sbjct: 74 RFFNDQINKAGVKSSVRPAMQPDI----DLEELEAKLREHENDLLEMNTNSEKLLQTYNE 129
Query: 126 LTELKHILRK 135
L E K +L K
Sbjct: 130 LLEFKMVLSK 139
>03_02_0381 +
7951360-7951509,7952125-7952169,7952625-7952744,
7952823-7952930,7953256-7953363,7953635-7953808,
7954054-7954191,7954643-7954750,7954866-7954973,
7955086-7955234,7955816-7955969,7956143-7956303,
7956391-7956597,7956703-7956886,7956974-7957057,
7957146-7957345,7957476-7957535,7957631-7957835
Length = 820
Score = 105 bits (253), Expect = 1e-23
Identities = 59/137 (43%), Positives = 82/137 (59%), Gaps = 5/137 (3%)
Query: 4 LFRSEEMTLCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDEMER 63
L RSE M L Q+ + +E+A+ VS LGELGL+Q +DLN D + FQR + +++RC EM R
Sbjct: 15 LMRSEAMQLVQVIIPTESAHLTVSYLGELGLLQLKDLNADKSPFQRTYAAQIKRCGEMAR 74
Query: 64 KLRYLEKEIRRDGIPMLEIPGECPEAPQPREMIDLEATFEKLENELREVNQNAEALKRNY 123
KLR+ ++++ + GI + E + DLE +LE EL EVN N E LKR Y
Sbjct: 75 KLRFFKEQMSKAGI---STSAQLTEI--SLDFDDLEIKLGELEAELAEVNANNEKLKRTY 129
Query: 124 LELTELKHILRKTQVFF 140
EL E +L+K FF
Sbjct: 130 NELLEYSTVLQKAGEFF 146
>10_02_0114 +
5431578-5431724,5432753-5432797,5433572-5433691,
5433773-5433880,5434900-5435073,5435366-5435503,
5435879-5435986,5436131-5436238,5436340-5436488,
5437594-5437747,5437980-5438140,5438221-5438427,
5438575-5438758,5438846-5438929,5439023-5439222,
5439314-5439373,5439461-5439665
Length = 783
Score = 101 bits (243), Expect = 2e-22
Identities = 55/135 (40%), Positives = 81/135 (60%), Gaps = 5/135 (3%)
Query: 4 LFRSEEMTLCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDEMER 63
L RSE M L Q+ + +E+A+ VS LG+LGL+QF+DLN D + FQR + ++++RC EM R
Sbjct: 14 LMRSEAMQLVQVIIPAESAHLAVSYLGDLGLLQFKDLNADKSPFQRTYASQIKRCGEMAR 73
Query: 64 KLRYLEKEIRRDGIPMLEIPGECPEAPQPREMIDLEATFEKLENELREVNQNAEALKRNY 123
KLR+ +++ + I + E+ DLE +LE EL EVN N + L+R Y
Sbjct: 74 KLRFFREQMSKAAIAT-----STQFSGTSLEIDDLEVKLGELEVELTEVNANNDKLQRTY 128
Query: 124 LELTELKHILRKTQV 138
EL E +L+K V
Sbjct: 129 NELVEYNIVLQKEMV 143
>04_04_1523 - 34148407-34150224
Length = 605
Score = 30.7 bits (66), Expect = 0.62
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 10 MTLCQLFLQSEAAYA-CVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDEMERKLRYL 68
+ LC +FL+ AA C++E+GE+ +FR L + + + + R+ E E +
Sbjct: 393 LVLCTIFLKEAAASGLCLAEIGEMMTREFRGLEEEPSKLEVVCMEARRKLAEWEPYSPVI 452
Query: 69 EKEIRRDGIPMLEIPGE 85
E+ D L++ GE
Sbjct: 453 EQGEDMDFQFSLDMLGE 469
>07_03_0532 +
19171290-19171394,19173122-19173302,19173761-19174245,
19174877-19176283,19176413-19176628
Length = 797
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 45 NAFQRKFVNEVRRCDEMERKLRYLEKEIRRDGIPMLEIPGEC 86
N F +F + +E+ RK+R LE+EI ++ E+ +C
Sbjct: 657 NKFASRFELKEAEVEELRRKIRLLEEEIHKEKAQSSELGVQC 698
>05_05_0348 +
24271764-24271898,24273055-24273144,24273205-24273303,
24273725-24273826,24273912-24274088,24274193-24274398,
24274491-24274575,24274641-24274798,24274873-24274948,
24275117-24275245,24275313-24275457,24275561-24275691,
24276183-24276335,24276447-24276636,24277006-24277139,
24277248-24277406,24277659-24277964,24278040-24278216,
24278446-24278529,24278592-24278822,24278913-24279002,
24279090-24279211,24279293-24279448,24279477-24279635,
24279705-24279765,24280004-24280138,24280384-24280471,
24280548-24280620,24280883-24280994,24281691-24281711
Length = 1327
Score = 29.1 bits (62), Expect = 1.9
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Query: 47 FQRKFVNEVRRCDEMERKLRYLEKEIRRDGIPMLEIPGECPEAPQPREMIDLEATFEKLE 106
F+RK V +++K++ LE + +D + E E E+ + LE KL+
Sbjct: 392 FERKDVKYREDLKHLKQKIKKLEDKTEKDTSKIDESTKEVEESSSL--IPQLEEEIPKLQ 449
Query: 107 NELREVNQNAEALKRNYLELTE 128
+ E + E +K N E TE
Sbjct: 450 EKFNEEEKVLEQIKENSREETE 471
>10_08_0558 +
18756797-18756887,18757189-18757262,18759881-18760069,
18760190-18760309,18760457-18760521,18760684-18760828,
18761304-18763337,18763904-18764025,18764127-18764309,
18764635-18764690,18765086-18765141
Length = 1044
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/22 (59%), Positives = 16/22 (72%)
Query: 97 DLEATFEKLENELREVNQNAEA 118
DLEA E LENEL+E ++ EA
Sbjct: 604 DLEANVESLENELQEQSKRLEA 625
>03_04_0110 -
17357323-17357403,17357487-17357595,17357737-17357906,
17358503-17358649,17358767-17358925,17359410-17359469,
17359659-17359705,17359786-17359888,17362640-17363080
Length = 438
Score = 28.7 bits (61), Expect = 2.5
Identities = 13/44 (29%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 103 EKLENEL--REVNQNAEALKRNYLELTELKHILRKTQVFFDERL 144
++++NE+ +E N L YLEL ++ I +++FF E++
Sbjct: 370 QQIDNEMITKEAEANRLKLTPEYLELRFIESIANNSKIFFGEKI 413
>06_03_1145 -
28000012-28000022,28000119-28000290,28000381-28000488,
28000578-28002152
Length = 621
Score = 28.3 bits (60), Expect = 3.3
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 60 EMERKLRYLEK-EIRRDGIPMLEIPGECPEAPQPREMIDLEATFEKLENELREVNQNAEA 118
E +R +R E + R + +P IPGE PE + +L+ +KL R+ + +
Sbjct: 293 ECDRAIRMEEPTDPREEDVPPGSIPGEKPEDRKSYIRTELKRLLQKLVLVCRDYWCSLAS 352
Query: 119 LKRNYLELTELKHILRKTQVFFDE 142
K++ L LK++ F+ +
Sbjct: 353 EKQDSFRLVGLKYLHLHFVTFYQD 376
>06_01_1173 +
10014391-10014678,10015478-10017245,10017333-10017436,
10017632-10017706,10017887-10017918,10019396-10019482,
10020848-10021294,10021477-10021630,10022203-10022329,
10022547-10022632,10022719-10022790,10023083-10023286,
10023732-10024049
Length = 1253
Score = 28.3 bits (60), Expect = 3.3
Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 80 LEIPGECPEAPQPREMIDL-EATFEKLENELREVNQNAEALKRNYLELTELKHILRKTQV 138
+ + +CPE+PQ RE + ++E+E +N+ L EL E LR +
Sbjct: 268 ISVGPQCPESPQERENSRVCSHARSRIESERARTLRNSRNLGSRIRELRENWSALRSGSI 327
Query: 139 FFDERLY 145
F +L+
Sbjct: 328 GFATQLH 334
>02_01_0224 -
1461924-1462227,1462602-1462798,1463059-1463213,
1464101-1464207,1464289-1464375,1465332-1465414,
1465959-1466027,1466332-1466658,1466744-1466957,
1467170-1467267,1467516-1467554,1467672-1468160
Length = 722
Score = 28.3 bits (60), Expect = 3.3
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 63 RKLRYLEKEIRRDGIPMLEIPGECPEAPQPREMIDLEATFEKLE-NELREVN 113
R++ L++E+ R M ++ EC E + R DLE ++ E LR N
Sbjct: 157 REVERLKRELNRVSKQMNDVKNECSELKKDRTRKDLEIKAKEAEIQSLRRAN 208
>01_01_1174 + 9348256-9349734
Length = 492
Score = 28.3 bits (60), Expect = 3.3
Identities = 12/40 (30%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 10 MTLCQLFLQ-SEAAYACVSELGELGLVQFRDLNPDVNAFQ 48
+TLC +FLQ + AA C++++G++ +F + ++A +
Sbjct: 333 LTLCTIFLQRAAAAGLCLADIGDMMTREFSAMEEGLSALE 372
>01_01_0568 -
4207812-4209587,4210056-4210291,4210647-4210793,
4211857-4212145
Length = 815
Score = 28.3 bits (60), Expect = 3.3
Identities = 19/62 (30%), Positives = 31/62 (50%)
Query: 97 DLEATFEKLENELREVNQNAEALKRNYLELTELKHILRKTQVFFDERLYCDADVGVYRSP 156
+L+AT LENE+ V E+L+ LT+ + + K V DE + D+ + S
Sbjct: 485 ELDATKAMLENEVAAVKSLRESLQSTEEALTDSRSEVSKLSVELDEANRMNQDLVLQISK 544
Query: 157 LR 158
L+
Sbjct: 545 LQ 546
>07_03_0541 +
19254455-19254666,19255053-19255207,19255420-19255496,
19255572-19255679
Length = 183
Score = 27.9 bits (59), Expect = 4.4
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
Query: 54 EVRRCDEMERKLRYLEKEIRRDGIPMLEIPGECPEAPQ--PREMIDLE------ATFEKL 105
E+R +EM +L + +I++ G E+ G+ Q R +DL+ A +++
Sbjct: 4 ELRAVEEMRAELAQVRLDIQKLGAARQELMGQVQGFTQDLARSAVDLQQVAALKAEIQEI 63
Query: 106 ENELREVNQNAEALKRNYLELTELKHILRK 135
+E + + E K+ Y E E ++K
Sbjct: 64 RHETQHLRSGIEVEKKGYAESYEQGQEMQK 93
>06_01_0733 +
5405889-5405922,5405923-5405975,5406430-5406543,
5407464-5407523,5408139-5408217,5410661-5410728,
5411198-5411302,5411887-5411994,5412087-5412279,
5412818-5412897,5413309-5413536,5414112-5414252,
5414341-5414466,5414561-5414611,5414879-5414956,
5415814-5415960,5416685-5417179
Length = 719
Score = 27.5 bits (58), Expect = 5.8
Identities = 10/42 (23%), Positives = 26/42 (61%)
Query: 94 EMIDLEATFEKLENELREVNQNAEALKRNYLELTELKHILRK 135
+++D + +K +NE+R++ + E L+R+ T ++ ++K
Sbjct: 207 KIMDARSLIKKYQNEIRQLKEELEQLRRSIRTGTPIEDTMQK 248
>02_04_0211 +
20957553-20957828,20957944-20958258,20962094-20962801,
20963362-20963609,20963758-20964101,20964200-20964236,
20964270-20964575,20965281-20965347,20965498-20965626
Length = 809
Score = 27.5 bits (58), Expect = 5.8
Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 1/78 (1%)
Query: 37 FRDLNPDVNAFQR-KFVNEVRRCDEMERKLRYLEKEIRRDGIPMLEIPGECPEAPQPREM 95
F NP N + R +R C + +Y +R G G A R+M
Sbjct: 723 FMTQNPLYNGYPRVPQAPPLRSCISKNKYSKYKFHTVRHTGGQTFGGSGNGARADVARKM 782
Query: 96 IDLEATFEKLENELREVN 113
+++ KLENE E+N
Sbjct: 783 KEVDHLLAKLENEGVEIN 800
>12_01_0978 +
9908001-9908175,9908538-9908619,9910793-9910904,
9911965-9913737
Length = 713
Score = 27.1 bits (57), Expect = 7.6
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 109 LREVN-QNAEALKRNYLELTE-LKHILRKTQVFFDERLYCDADVGVYRSPLRQALESA 164
L E N Q A+ L++ + E L H+ T+ +E A+ V R +QALE A
Sbjct: 265 LAETNKQKADQLRKEIATIQESLTHVKAATEQAHEEEAQILAEKDVTRKTYKQALEEA 322
>04_03_1002 -
21617339-21617362,21618476-21618565,21618755-21619432,
21619536-21619772,21619849-21619896,21619995-21620045,
21620301-21620426,21620557-21620697,21621165-21621401,
21622467-21622571,21622812-21622982,21623306-21623380,
21623754-21623936,21624151-21624297,21624365-21624472,
21624605-21624709,21625109-21625213,21625322-21625381,
21625512-21625579,21625876-21625954,21626208-21626267,
21626445-21626498,21626834-21626886,21627405-21627494,
21628265-21628362,21628464-21628852
Length = 1193
Score = 27.1 bits (57), Expect = 7.6
Identities = 24/104 (23%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Query: 38 RDLNPDVNAFQRKFVNEVRRCDEMERKLRYLEKEIRRDGIPMLEIPGECPEAPQPREM-- 95
R + ++ A Q K ++E + ++++ L++E+++ M+ G P Q +
Sbjct: 411 RSKHIEIKASQNKIIDEKSLIKKYQKEITCLKEELQQLRRGMMG-NGYIPPTDQEDLVSL 469
Query: 96 -IDLEATFEKLENELREVNQNAEALKRNYLELTELKHILRKTQV 138
+ LEA KL++ L E + AL LT+L + K+ +
Sbjct: 470 KLQLEAGQVKLQSRLEEEEEAKAALMGRIQRLTKLILVSTKSSI 513
>04_01_0180 + 2034021-2034023,2034741-2035088
Length = 116
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 98 LEATFEKLENELREVNQNAEALKRNYLELTELKHILRK 135
L KL + ++E+N EAL+R LT K +K
Sbjct: 33 LNGRISKLNDTIKELNDTIEALERQVQNLTRYKEEKQK 70
>03_05_0754 +
27452203-27452242,27452360-27455611,27456480-27456533,
27456774-27456872,27456948-27457012,27457476-27457575,
27458326-27458408,27458494-27458569,27458920-27459698
Length = 1515
Score = 27.1 bits (57), Expect = 7.6
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 91 QPREMIDLEATFEKLENELREVNQNAEALKRNYLELTELKHILRK 135
Q + M LE +ENEL+ LKR+ + TE++ LR+
Sbjct: 592 QKQAMEHLEELKLSMENELKGYMDENNVLKRDLIATTEIEKSLRE 636
>03_02_0944 - 12603801-12604919
Length = 372
Score = 27.1 bits (57), Expect = 7.6
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 96 IDLEATFEKLENELREVNQNAEAL-KRNYLELTELKHILRKTQVFFDE 142
+D+++TF L N + E Q AE L N ++ L + +F DE
Sbjct: 212 VDMDSTFGNLSNNINEGKQEAENLTSLNAFDIISLSSGFDLSAMFEDE 259
>02_04_0481 +
23284296-23284448,23284553-23284753,23284855-23287971,
23288510-23289353,23289468-23290120,23290573-23290676,
23290898-23291000
Length = 1724
Score = 27.1 bits (57), Expect = 7.6
Identities = 30/136 (22%), Positives = 66/136 (48%), Gaps = 10/136 (7%)
Query: 8 EEMTLCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDEMERKLRY 67
+E+TLC++ L+ + A SE+ L + + + + +A + + + + + +E K
Sbjct: 671 QELTLCKIILEEDKADR--SEMMRLS-GELQRMVQETDALKNEKDSLQKELERVEEKSSL 727
Query: 68 LEKEIRRDGIPMLEIPGECPEAPQPREMID-LEATFEKLENELREVNQNAEALKRNYLEL 126
L +++ + + + G E ++++D ++ EKL++ L E N E LK+ L
Sbjct: 728 LREKL---SMAVKKGKGLVQEREGLKQVLDEKKSDIEKLKHALDEKNAELENLKQT---L 781
Query: 127 TELKHILRKTQVFFDE 142
+L K + +DE
Sbjct: 782 DGNNSVLEKLKQAWDE 797
>02_01_0642 - 4803464-4805665,4806231-4806320
Length = 763
Score = 27.1 bits (57), Expect = 7.6
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Query: 4 LFRSEEMTLCQLFLQS-EAAYACVSELGELGLVQFRDLNPDVNAFQRKFV--NEVRRCDE 60
L ++EE+TL + ++S E ++ E ++L ++ + F NE+R+ +E
Sbjct: 218 LKKNEEVTLMRSEIKSKEQLLLEANQAAEQQEATIKELRSEIKRKEIDFSRSNELRKANE 277
Query: 61 MERKLRYLEKEIRRDGIPMLEIPGECPEAPQ 91
+KL+ E+E+ R + L E E Q
Sbjct: 278 --QKLKIAEQELERQNMGWLAAQKELKEVAQ 306
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.320 0.138 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,457,676
Number of Sequences: 37544
Number of extensions: 174886
Number of successful extensions: 633
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 618
Number of HSP's gapped (non-prelim): 27
length of query: 166
length of database: 14,793,348
effective HSP length: 77
effective length of query: 89
effective length of database: 11,902,460
effective search space: 1059318940
effective search space used: 1059318940
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 57 (27.1 bits)
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