Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002538-TA|BGIBMGA002538-PA|IPR002490|ATPase, V0/A0
complex, 116-kDa subunit, IPR009053|Prefoldin
(166 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439060-7|CAD27758.1| 849|Anopheles gambiae putative V-ATPase ... 200 2e-53
AJ439060-8|CAD27759.1| 808|Anopheles gambiae putative V-ATPase ... 184 1e-48
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 24 2.1
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 24 2.1
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 24 2.1
CR954257-13|CAJ14164.1| 420|Anopheles gambiae predicted protein... 24 2.8
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 22 8.6
AJ459959-1|CAD31058.1| 462|Anopheles gambiae dopachrome convers... 22 8.6
AB090814-1|BAC57903.1| 499|Anopheles gambiae gag-like protein p... 22 8.6
>AJ439060-7|CAD27758.1| 849|Anopheles gambiae putative V-ATPase
protein.
Length = 849
Score = 200 bits (488), Expect = 2e-53
Identities = 96/144 (66%), Positives = 114/144 (79%), Gaps = 1/144 (0%)
Query: 1 MGSLFRSEEMTLCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDE 60
M +FRSEEM LCQ+F+Q EAAY VSELGE G VQFRDLN DVNAFQRKFV+EVRRCDE
Sbjct: 1 MAMMFRSEEMALCQMFIQPEAAYTSVSELGETGAVQFRDLNADVNAFQRKFVSEVRRCDE 60
Query: 61 MERKLRYLEKEIRRDGIPMLEIP-GECPEAPQPREMIDLEATFEKLENELREVNQNAEAL 119
MERKLRY+E E+++D + + E + P AP PRE+IDLEA EK ENE+ E++QNA L
Sbjct: 61 MERKLRYVEGEVKKDSVQIPECSVDDWPRAPNPREIIDLEARLEKTENEILELSQNAVNL 120
Query: 120 KRNYLELTELKHILRKTQVFFDER 143
K NYLELTELKH+L +TQ FF E+
Sbjct: 121 KSNYLELTELKHVLERTQSFFFEQ 144
>AJ439060-8|CAD27759.1| 808|Anopheles gambiae putative V-ATPase
protein.
Length = 808
Score = 184 bits (449), Expect = 1e-48
Identities = 81/143 (56%), Positives = 112/143 (78%)
Query: 1 MGSLFRSEEMTLCQLFLQSEAAYACVSELGELGLVQFRDLNPDVNAFQRKFVNEVRRCDE 60
MG++FRSEEM++ QL +Q EAAY V+ELGELG+ QFRDLN D+N FQRK+ +E+RRC+E
Sbjct: 1 MGAMFRSEEMSMVQLLIQPEAAYQSVAELGELGIAQFRDLNTDINMFQRKYTSEIRRCEE 60
Query: 61 MERKLRYLEKEIRRDGIPMLEIPGECPEAPQPREMIDLEATFEKLENELREVNQNAEALK 120
MERK+ Y+ +EI +D + + ++P P P RE+IDLEA EK ENE+ E+++N AL
Sbjct: 61 MERKIGYIRREIVKDSVAIPDMPEVIPRTPNSREIIDLEAQLEKTENEIVELSENNNALL 120
Query: 121 RNYLELTELKHILRKTQVFFDER 143
+N++ELTELKH+L KTQVFF ++
Sbjct: 121 QNFMELTELKHVLEKTQVFFSDK 143
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 24.2 bits (50), Expect = 2.1
Identities = 9/29 (31%), Positives = 19/29 (65%)
Query: 87 PEAPQPREMIDLEATFEKLENELREVNQN 115
P AP+ ++ ++EK+ +EL+E+ +N
Sbjct: 1022 PNAPEEEKIRYRNESYEKINSELQELYRN 1050
>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
Length = 3318
Score = 24.2 bits (50), Expect = 2.1
Identities = 9/29 (31%), Positives = 19/29 (65%)
Query: 87 PEAPQPREMIDLEATFEKLENELREVNQN 115
P AP+ ++ ++EK+ +EL+E+ +N
Sbjct: 1023 PNAPEEEKIRYRNESYEKINSELQELYRN 1051
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 24.2 bits (50), Expect = 2.1
Identities = 9/39 (23%), Positives = 23/39 (58%)
Query: 38 RDLNPDVNAFQRKFVNEVRRCDEMERKLRYLEKEIRRDG 76
RD ++N+ ++ + R+ ++E ++ LE+E++ G
Sbjct: 431 RDKQKNMNSSDAAYLEDKRKLTKVEGQIGQLERELQSTG 469
>CR954257-13|CAJ14164.1| 420|Anopheles gambiae predicted protein
protein.
Length = 420
Score = 23.8 bits (49), Expect = 2.8
Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Query: 40 LNPDVNAFQRKFVNEVRRCDEMERKLR 66
L+PD A R V+ +RRC E ERK R
Sbjct: 388 LDPD-EASLRLEVDRLRRCIEEERKNR 413
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 22.2 bits (45), Expect = 8.6
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 40 LNPDVNAFQRKFVNEVRRCDEMERKLRYLEK 70
+N V+A + + RC ER+++ LEK
Sbjct: 258 INERVDALNEERTEKHNRCKLAEREMKDLEK 288
>AJ459959-1|CAD31058.1| 462|Anopheles gambiae dopachrome conversion
enzyme protein.
Length = 462
Score = 22.2 bits (45), Expect = 8.6
Identities = 9/23 (39%), Positives = 11/23 (47%)
Query: 39 DLNPDVNAFQRKFVNEVRRCDEM 61
DL PD N + V RCD +
Sbjct: 109 DLQPDANRIVTVYRPRVDRCDRL 131
>AB090814-1|BAC57903.1| 499|Anopheles gambiae gag-like protein
protein.
Length = 499
Score = 22.2 bits (45), Expect = 8.6
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query: 61 MERKLRYLEKEIRRDGIPMLEIPGECPEAPQPREMIDLEATFEKLENELREVNQNAEALK 120
+ER+L ++ R + E+ E PE P + T E+ E+ R N +A +
Sbjct: 151 IERELLTMKLRAERAEKALREVQSEPPETPMTGKRSRKARTPEEAEDAKRAKN-DAPSCN 209
Query: 121 RNYLELTE 128
R E +E
Sbjct: 210 RPDAEYSE 217
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.320 0.138 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,712
Number of Sequences: 2123
Number of extensions: 6210
Number of successful extensions: 18
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 9
Number of HSP's gapped (non-prelim): 10
length of query: 166
length of database: 516,269
effective HSP length: 59
effective length of query: 107
effective length of database: 391,012
effective search space: 41838284
effective search space used: 41838284
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)
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