Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002537-TA|BGIBMGA002537-PA|undefined
(357 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 38 0.008
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 38 0.008
AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical ... 34 0.13
AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical ... 34 0.13
AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical ... 34 0.13
AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein. 34 0.13
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr... 32 0.72
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p... 32 0.72
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p... 31 1.3
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane... 31 1.3
U64601-8|AAB04576.2| 413|Caenorhabditis elegans Hypothetical pr... 30 2.2
L16679-1|AAA28092.5| 2104|Caenorhabditis elegans Muscle position... 30 2.2
AF289202-1|AAK69172.1| 2104|Caenorhabditis elegans transmembrane... 30 2.2
Z81110-6|CAB03261.1| 3191|Caenorhabditis elegans Hypothetical pr... 30 2.9
Z81094-8|CAB03155.1| 3191|Caenorhabditis elegans Hypothetical pr... 30 2.9
Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical p... 29 5.1
U58750-13|AAB00653.1| 616|Caenorhabditis elegans Hypothetical p... 29 5.1
U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein. 29 5.1
U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein. 29 5.1
Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical pr... 28 8.8
Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical pr... 28 8.8
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p... 28 8.8
U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical pr... 28 8.8
M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein ( C.ele... 28 8.8
AY037802-1|AAK94767.1| 669|Caenorhabditis elegans GLY-2 protein. 28 8.8
AY037800-1|AAK94765.1| 661|Caenorhabditis elegans GLY-2 protein. 28 8.8
AF154122-1|AAF74523.1| 669|Caenorhabditis elegans N-acetylgluco... 28 8.8
AC006625-9|AAK68273.1| 669|Caenorhabditis elegans Glycosylation... 28 8.8
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 38.3 bits (85), Expect = 0.008
Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 12/90 (13%)
Query: 7 YLGSPCEFTCNPKLVHVFCDPATSTCQCDHKHPVPLGVANGCAKPKKLGEQCFYRQTCRA 66
Y G C C+ KL CDP+T +C+C+ P ++G G QC + CR
Sbjct: 630 YWGVDCAHKCSCKL----CDPSTGSCRCED----PEKCSDGPCPDGFYGSQCNLK--CRM 679
Query: 67 FDAHSSCVQVNHNAYCKCEPGYHSTSHSRP 96
+ C V YC C G + S +P
Sbjct: 680 DCPNGRCDPV--FGYCTCPDGLYGQSCEKP 707
Score = 35.5 bits (78), Expect = 0.058
Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 13/87 (14%)
Query: 7 YLGSPCEFTCNPKLVHVFCDPATSTCQCDHKHPVPLGV-ANGCAKPKK---LGEQCFYRQ 62
+ GS C C + CDP C C P G+ C KP G+ C +
Sbjct: 668 FYGSQCNLKCRMDCPNGRCDPVFGYCTC------PDGLYGQSCEKPCPHFTFGKNCRFPC 721
Query: 63 TCRAFDAHSSCVQVNHNAYCKCEPGYH 89
C A + C ++ C+C+PGY+
Sbjct: 722 KC-ARENSEGCDEITGK--CRCKPGYY 745
Score = 28.3 bits (60), Expect = 8.8
Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 14/91 (15%)
Query: 9 GSPCEFTCNPKLVHVFCDPATSTCQCDHKHPVPLGVANGCAKP---KKLGEQCFYRQTCR 65
G C CN K CD T C+C +P C K G +C +TC
Sbjct: 1164 GRNCAQRCNCKN-GASCDRKTGRCEC-----LPGWSGEHCEKSCVSGHYGAKC--EETCE 1215
Query: 66 AFDAHSSCVQVNHNAYCKCEPGYHSTSHSRP 96
+ + C ++ +C C+PG+ +RP
Sbjct: 1216 CENG-ALCDPIS--GHCSCQPGWRGKKCNRP 1243
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 38.3 bits (85), Expect = 0.008
Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 12/90 (13%)
Query: 7 YLGSPCEFTCNPKLVHVFCDPATSTCQCDHKHPVPLGVANGCAKPKKLGEQCFYRQTCRA 66
Y G C C+ KL CDP+T +C+C+ P ++G G QC + CR
Sbjct: 630 YWGVDCAHKCSCKL----CDPSTGSCRCED----PEKCSDGPCPDGFYGSQCNLK--CRM 679
Query: 67 FDAHSSCVQVNHNAYCKCEPGYHSTSHSRP 96
+ C V YC C G + S +P
Sbjct: 680 DCPNGRCDPV--FGYCTCPDGLYGQSCEKP 707
Score = 35.5 bits (78), Expect = 0.058
Identities = 24/87 (27%), Positives = 35/87 (40%), Gaps = 13/87 (14%)
Query: 7 YLGSPCEFTCNPKLVHVFCDPATSTCQCDHKHPVPLGV-ANGCAKPKK---LGEQCFYRQ 62
+ GS C C + CDP C C P G+ C KP G+ C +
Sbjct: 668 FYGSQCNLKCRMDCPNGRCDPVFGYCTC------PDGLYGQSCEKPCPHFTFGKNCRFPC 721
Query: 63 TCRAFDAHSSCVQVNHNAYCKCEPGYH 89
C A + C ++ C+C+PGY+
Sbjct: 722 KC-ARENSEGCDEITGK--CRCKPGYY 745
Score = 28.3 bits (60), Expect = 8.8
Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 14/91 (15%)
Query: 9 GSPCEFTCNPKLVHVFCDPATSTCQCDHKHPVPLGVANGCAKP---KKLGEQCFYRQTCR 65
G C CN K CD T C+C +P C K G +C +TC
Sbjct: 1164 GRNCAQRCNCKN-GASCDRKTGRCEC-----LPGWSGEHCEKSCVSGHYGAKC--EETCE 1215
Query: 66 AFDAHSSCVQVNHNAYCKCEPGYHSTSHSRP 96
+ + C ++ +C C+PG+ +RP
Sbjct: 1216 CENG-ALCDPIS--GHCSCQPGWRGKKCNRP 1243
>AL032657-5|CAD27615.1| 1045|Caenorhabditis elegans Hypothetical
protein Y47H9C.4c protein.
Length = 1045
Score = 34.3 bits (75), Expect = 0.13
Identities = 26/85 (30%), Positives = 32/85 (37%), Gaps = 16/85 (18%)
Query: 10 SPCEFTCNPKLVHVFCDPATSTCQCDHKHPVPLGVANGCAKPKKLGEQCFYRQTCRAFDA 69
SPC T V + C P +S C+H P +GC +Q C D
Sbjct: 648 SPCASTDPKNGVCLSCPPGSSGIHCEHNCPAG-SYGDGC------------QQVCSCADG 694
Query: 70 HSSCVQVNHNAYCKCEPGYHSTSHS 94
H C C CEPGYH + S
Sbjct: 695 H-GCDPT--TGECICEPGYHGKTCS 716
Score = 33.9 bits (74), Expect = 0.18
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 10/91 (10%)
Query: 4 KGRYLGSPCEFTCN-PKLV----HVFCDPATSTCQCDHKHPVPLGVANGCAKPKKLGEQC 58
+GR+ G C+ C P L + CD T CQC+ + P C ++ G C
Sbjct: 323 RGRF-GLQCKQNCTCPGLEFSDSNASCDAKTGQCQCESGYKGPKCDERKC-DAEQYGADC 380
Query: 59 FYRQTCRAFDAHSSCVQVNHNAYCKCEPGYH 89
+TC ++ N +C+C+PG++
Sbjct: 381 --SKTCTCVRENTLMCAPN-TGFCRCKPGFY 408
Score = 28.7 bits (61), Expect = 6.7
Identities = 31/102 (30%), Positives = 40/102 (39%), Gaps = 21/102 (20%)
Query: 9 GSPCEFTCN-PKLVHVFCDPATSTCQCDHKHPVPLGVAN---GCAKPKKLGEQCFYRQTC 64
G+ CE C PK + CDP T C C P L AN GC + G C C
Sbjct: 511 GANCEKRCKCPK--GIGCDPITGECTC----PAGLQGANCDIGCPE-GSYGPGCKLHCKC 563
Query: 65 RAFDAHSSCVQVNHNAYCKCEPGYH----STSHSRPTYRVFC 102
+ C + C C+PG+ ST+ S+ Y C
Sbjct: 564 ----VNGKCDK--ETGECTCQPGFFGSDCSTTCSKGKYGESC 599
>AL032657-4|CAD27614.1| 1070|Caenorhabditis elegans Hypothetical
protein Y47H9C.4b protein.
Length = 1070
Score = 34.3 bits (75), Expect = 0.13
Identities = 26/85 (30%), Positives = 32/85 (37%), Gaps = 16/85 (18%)
Query: 10 SPCEFTCNPKLVHVFCDPATSTCQCDHKHPVPLGVANGCAKPKKLGEQCFYRQTCRAFDA 69
SPC T V + C P +S C+H P +GC +Q C D
Sbjct: 648 SPCASTDPKNGVCLSCPPGSSGIHCEHNCPAG-SYGDGC------------QQVCSCADG 694
Query: 70 HSSCVQVNHNAYCKCEPGYHSTSHS 94
H C C CEPGYH + S
Sbjct: 695 H-GCDPT--TGECICEPGYHGKTCS 716
Score = 33.9 bits (74), Expect = 0.18
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 10/91 (10%)
Query: 4 KGRYLGSPCEFTCN-PKLV----HVFCDPATSTCQCDHKHPVPLGVANGCAKPKKLGEQC 58
+GR+ G C+ C P L + CD T CQC+ + P C ++ G C
Sbjct: 323 RGRF-GLQCKQNCTCPGLEFSDSNASCDAKTGQCQCESGYKGPKCDERKC-DAEQYGADC 380
Query: 59 FYRQTCRAFDAHSSCVQVNHNAYCKCEPGYH 89
+TC ++ N +C+C+PG++
Sbjct: 381 --SKTCTCVRENTLMCAPN-TGFCRCKPGFY 408
Score = 28.7 bits (61), Expect = 6.7
Identities = 31/102 (30%), Positives = 40/102 (39%), Gaps = 21/102 (20%)
Query: 9 GSPCEFTCN-PKLVHVFCDPATSTCQCDHKHPVPLGVAN---GCAKPKKLGEQCFYRQTC 64
G+ CE C PK + CDP T C C P L AN GC + G C C
Sbjct: 511 GANCEKRCKCPK--GIGCDPITGECTC----PAGLQGANCDIGCPE-GSYGPGCKLHCKC 563
Query: 65 RAFDAHSSCVQVNHNAYCKCEPGYH----STSHSRPTYRVFC 102
+ C + C C+PG+ ST+ S+ Y C
Sbjct: 564 ----VNGKCDK--ETGECTCQPGFFGSDCSTTCSKGKYGESC 599
>AL032657-3|CAA21739.1| 1111|Caenorhabditis elegans Hypothetical
protein Y47H9C.4a protein.
Length = 1111
Score = 34.3 bits (75), Expect = 0.13
Identities = 26/85 (30%), Positives = 32/85 (37%), Gaps = 16/85 (18%)
Query: 10 SPCEFTCNPKLVHVFCDPATSTCQCDHKHPVPLGVANGCAKPKKLGEQCFYRQTCRAFDA 69
SPC T V + C P +S C+H P +GC +Q C D
Sbjct: 648 SPCASTDPKNGVCLSCPPGSSGIHCEHNCPAG-SYGDGC------------QQVCSCADG 694
Query: 70 HSSCVQVNHNAYCKCEPGYHSTSHS 94
H C C CEPGYH + S
Sbjct: 695 H-GCDPT--TGECICEPGYHGKTCS 716
Score = 33.9 bits (74), Expect = 0.18
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 10/91 (10%)
Query: 4 KGRYLGSPCEFTCN-PKLV----HVFCDPATSTCQCDHKHPVPLGVANGCAKPKKLGEQC 58
+GR+ G C+ C P L + CD T CQC+ + P C ++ G C
Sbjct: 323 RGRF-GLQCKQNCTCPGLEFSDSNASCDAKTGQCQCESGYKGPKCDERKC-DAEQYGADC 380
Query: 59 FYRQTCRAFDAHSSCVQVNHNAYCKCEPGYH 89
+TC ++ N +C+C+PG++
Sbjct: 381 --SKTCTCVRENTLMCAPN-TGFCRCKPGFY 408
Score = 28.7 bits (61), Expect = 6.7
Identities = 31/102 (30%), Positives = 40/102 (39%), Gaps = 21/102 (20%)
Query: 9 GSPCEFTCN-PKLVHVFCDPATSTCQCDHKHPVPLGVAN---GCAKPKKLGEQCFYRQTC 64
G+ CE C PK + CDP T C C P L AN GC + G C C
Sbjct: 511 GANCEKRCKCPK--GIGCDPITGECTC----PAGLQGANCDIGCPE-GSYGPGCKLHCKC 563
Query: 65 RAFDAHSSCVQVNHNAYCKCEPGYH----STSHSRPTYRVFC 102
+ C + C C+PG+ ST+ S+ Y C
Sbjct: 564 ----VNGKCDK--ETGECTCQPGFFGSDCSTTCSKGKYGESC 599
>AF332568-1|AAG60061.1| 1111|Caenorhabditis elegans CED-1 protein.
Length = 1111
Score = 34.3 bits (75), Expect = 0.13
Identities = 26/85 (30%), Positives = 32/85 (37%), Gaps = 16/85 (18%)
Query: 10 SPCEFTCNPKLVHVFCDPATSTCQCDHKHPVPLGVANGCAKPKKLGEQCFYRQTCRAFDA 69
SPC T V + C P +S C+H P +GC +Q C D
Sbjct: 648 SPCASTDPKNGVCLSCPPGSSGIHCEHNCPAG-SYGDGC------------QQVCSCADG 694
Query: 70 HSSCVQVNHNAYCKCEPGYHSTSHS 94
H C C CEPGYH + S
Sbjct: 695 H-GCDPT--TGECICEPGYHGKTCS 716
Score = 33.9 bits (74), Expect = 0.18
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 10/91 (10%)
Query: 4 KGRYLGSPCEFTCN-PKLV----HVFCDPATSTCQCDHKHPVPLGVANGCAKPKKLGEQC 58
+GR+ G C+ C P L + CD T CQC+ + P C ++ G C
Sbjct: 323 RGRF-GLQCKQNCTCPGLEFSDSNASCDAKTGQCQCESGYKGPKCDERKC-DAEQYGADC 380
Query: 59 FYRQTCRAFDAHSSCVQVNHNAYCKCEPGYH 89
+TC ++ N +C+C+PG++
Sbjct: 381 --SKTCTCVRENTLMCAPN-TGFCRCKPGFY 408
Score = 28.7 bits (61), Expect = 6.7
Identities = 31/102 (30%), Positives = 40/102 (39%), Gaps = 21/102 (20%)
Query: 9 GSPCEFTCN-PKLVHVFCDPATSTCQCDHKHPVPLGVAN---GCAKPKKLGEQCFYRQTC 64
G+ CE C PK + CDP T C C P L AN GC + G C C
Sbjct: 511 GANCEKRCKCPK--GIGCDPITGECTC----PAGLQGANCDIGCPE-GSYGPGCKLHCKC 563
Query: 65 RAFDAHSSCVQVNHNAYCKCEPGYH----STSHSRPTYRVFC 102
+ C + C C+PG+ ST+ S+ Y C
Sbjct: 564 ----VNGKCDK--ETGECTCQPGFFGSDCSTTCSKGKYGESC 599
>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 31.9 bits (69), Expect = 0.72
Identities = 26/101 (25%), Positives = 37/101 (36%), Gaps = 21/101 (20%)
Query: 4 KGRYLGSPCE----FTCNPKLVHVFCDPATSTCQCDHKHPVPLGVANGCAKPKKLGEQCF 59
+ R +PC+ C+P P CQC P G + A + G +C
Sbjct: 26 RSRLGANPCQDYSLHDCDPVAECFSEQPGYFQCQC------PKGFTDSSADKRFPGRKCV 79
Query: 60 Y--------RQTCRAFDAHSSCVQVNHNAYCKCEPGYHSTS 92
R TC D H+ C+ + CKC G+ TS
Sbjct: 80 RAVDECALGRHTC---DPHADCIDTHQGYTCKCRSGWSDTS 117
Score = 30.3 bits (65), Expect = 2.2
Identities = 19/79 (24%), Positives = 29/79 (36%), Gaps = 12/79 (15%)
Query: 27 PATSTCQCDHKHPVPLGVANGCAKPKKLGEQCFY------RQTCRAFDAHSSCVQVNHNA 80
P TCQC P+ + P+K G C + + A + C +
Sbjct: 2056 PNGYTCQC------PINAKDQSPDPRKPGRICSLSVNECANPSLNSCSAFADCFDEENGY 2109
Query: 81 YCKCEPGYHSTSHSRPTYR 99
C+C GYH + P +R
Sbjct: 2110 RCRCRNGYHDDDPAHPGHR 2128
Score = 29.5 bits (63), Expect = 3.8
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 70 HSSCVQVNHNAYCKCEPGYHSTSHSRP 96
+++C+ + CKC G+ SH RP
Sbjct: 1593 NAACIDLEEGYECKCNQGFMDHSHGRP 1619
>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
protein K08E5.3b protein.
Length = 3183
Score = 31.9 bits (69), Expect = 0.72
Identities = 26/101 (25%), Positives = 37/101 (36%), Gaps = 21/101 (20%)
Query: 4 KGRYLGSPCE----FTCNPKLVHVFCDPATSTCQCDHKHPVPLGVANGCAKPKKLGEQCF 59
+ R +PC+ C+P P CQC P G + A + G +C
Sbjct: 26 RSRLGANPCQDYSLHDCDPVAECFSEQPGYFQCQC------PKGFTDSSADKRFPGRKCV 79
Query: 60 Y--------RQTCRAFDAHSSCVQVNHNAYCKCEPGYHSTS 92
R TC D H+ C+ + CKC G+ TS
Sbjct: 80 RAVDECALGRHTC---DPHADCIDTHQGYTCKCRSGWSDTS 117
Score = 30.3 bits (65), Expect = 2.2
Identities = 19/79 (24%), Positives = 29/79 (36%), Gaps = 12/79 (15%)
Query: 27 PATSTCQCDHKHPVPLGVANGCAKPKKLGEQCFY------RQTCRAFDAHSSCVQVNHNA 80
P TCQC P+ + P+K G C + + A + C +
Sbjct: 2056 PNGYTCQC------PINAKDQSPDPRKPGRICSLSVNECANPSLNSCSAFADCFDEENGY 2109
Query: 81 YCKCEPGYHSTSHSRPTYR 99
C+C GYH + P +R
Sbjct: 2110 RCRCRNGYHDDDPAHPGHR 2128
Score = 29.5 bits (63), Expect = 3.8
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 70 HSSCVQVNHNAYCKCEPGYHSTSHSRP 96
+++C+ + CKC G+ SH RP
Sbjct: 1593 NAACIDLEEGYECKCNQGFMDHSHGRP 1619
>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 31.1 bits (67), Expect = 1.3
Identities = 23/85 (27%), Positives = 31/85 (36%), Gaps = 17/85 (20%)
Query: 16 CNPKLVHVFCDPATSTCQCDHKHPVPLGVANGCAKPKKLGEQCFY--------RQTCRAF 67
C+P P CQC P G + A + G +C R TC
Sbjct: 626 CDPVAECFSEQPGYFQCQC------PKGFTDSSADKRFPGRKCVRAVDECALGRHTC--- 676
Query: 68 DAHSSCVQVNHNAYCKCEPGYHSTS 92
D H+ C+ + CKC G+ TS
Sbjct: 677 DPHADCIDTHQGYTCKCRSGWSDTS 701
Score = 30.3 bits (65), Expect = 2.2
Identities = 19/79 (24%), Positives = 29/79 (36%), Gaps = 12/79 (15%)
Query: 27 PATSTCQCDHKHPVPLGVANGCAKPKKLGEQCFY------RQTCRAFDAHSSCVQVNHNA 80
P TCQC P+ + P+K G C + + A + C +
Sbjct: 2640 PNGYTCQC------PINAKDQSPDPRKPGRICSLSVNECANPSLNSCSAFADCFDEENGY 2693
Query: 81 YCKCEPGYHSTSHSRPTYR 99
C+C GYH + P +R
Sbjct: 2694 RCRCRNGYHDDDPAHPGHR 2712
Score = 29.5 bits (63), Expect = 3.8
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 70 HSSCVQVNHNAYCKCEPGYHSTSHSRP 96
+++C+ + CKC G+ SH RP
Sbjct: 2177 NAACIDLEEGYECKCNQGFMDHSHGRP 2203
>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
protein K08E5.3a protein.
Length = 3767
Score = 31.1 bits (67), Expect = 1.3
Identities = 23/85 (27%), Positives = 31/85 (36%), Gaps = 17/85 (20%)
Query: 16 CNPKLVHVFCDPATSTCQCDHKHPVPLGVANGCAKPKKLGEQCFY--------RQTCRAF 67
C+P P CQC P G + A + G +C R TC
Sbjct: 626 CDPVAECFSEQPGYFQCQC------PKGFTDSSADKRFPGRKCVRAVDECALGRHTC--- 676
Query: 68 DAHSSCVQVNHNAYCKCEPGYHSTS 92
D H+ C+ + CKC G+ TS
Sbjct: 677 DPHADCIDTHQGYTCKCRSGWSDTS 701
Score = 30.3 bits (65), Expect = 2.2
Identities = 19/79 (24%), Positives = 29/79 (36%), Gaps = 12/79 (15%)
Query: 27 PATSTCQCDHKHPVPLGVANGCAKPKKLGEQCFY------RQTCRAFDAHSSCVQVNHNA 80
P TCQC P+ + P+K G C + + A + C +
Sbjct: 2640 PNGYTCQC------PINAKDQSPDPRKPGRICSLSVNECANPSLNSCSAFADCFDEENGY 2693
Query: 81 YCKCEPGYHSTSHSRPTYR 99
C+C GYH + P +R
Sbjct: 2694 RCRCRNGYHDDDPAHPGHR 2712
Score = 29.5 bits (63), Expect = 3.8
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 70 HSSCVQVNHNAYCKCEPGYHSTSHSRP 96
+++C+ + CKC G+ SH RP
Sbjct: 2177 NAACIDLEEGYECKCNQGFMDHSHGRP 2203
>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane
cell adhesion receptorMUA-3 precursor protein.
Length = 3767
Score = 31.1 bits (67), Expect = 1.3
Identities = 23/85 (27%), Positives = 31/85 (36%), Gaps = 17/85 (20%)
Query: 16 CNPKLVHVFCDPATSTCQCDHKHPVPLGVANGCAKPKKLGEQCFY--------RQTCRAF 67
C+P P CQC P G + A + G +C R TC
Sbjct: 626 CDPVAECFSEQPGYFQCQC------PKGFTDSSADKRFPGRKCVRAVDECALGRHTC--- 676
Query: 68 DAHSSCVQVNHNAYCKCEPGYHSTS 92
D H+ C+ + CKC G+ TS
Sbjct: 677 DPHADCIDTHQGYTCKCRSGWSDTS 701
Score = 30.3 bits (65), Expect = 2.2
Identities = 19/79 (24%), Positives = 29/79 (36%), Gaps = 12/79 (15%)
Query: 27 PATSTCQCDHKHPVPLGVANGCAKPKKLGEQCFY------RQTCRAFDAHSSCVQVNHNA 80
P TCQC P+ + P+K G C + + A + C +
Sbjct: 2640 PNGYTCQC------PINAKDQSPDPRKPGRICSLSVNECANPSLNSCSAFADCFDEENGY 2693
Query: 81 YCKCEPGYHSTSHSRPTYR 99
C+C GYH + P +R
Sbjct: 2694 RCRCRNGYHDDDPAHPGHR 2712
Score = 29.5 bits (63), Expect = 3.8
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 70 HSSCVQVNHNAYCKCEPGYHSTSHSRP 96
+++C+ + CKC G+ SH RP
Sbjct: 2177 NAACIDLEEGYECKCNQGFMDHSHGRP 2203
>U64601-8|AAB04576.2| 413|Caenorhabditis elegans Hypothetical
protein M03F4.6 protein.
Length = 413
Score = 30.3 bits (65), Expect = 2.2
Identities = 22/77 (28%), Positives = 30/77 (38%), Gaps = 8/77 (10%)
Query: 32 CQCDHKHPVPLGVANGCAKPKKLGEQCFYRQTCRAFDAHSSCVQVNHNAYCKCEPGYHST 91
C + P PL V C G+ C Q C SC + C+C+ GYH
Sbjct: 265 CPRPCRDPTPLYVNGQCLSIAHRGDPCQIDQQCEG-GITMSCTLGS----CQCKLGYHEN 319
Query: 92 SHSRPTYRVFCTEDMVL 108
+ R + CT+D L
Sbjct: 320 NDER---FLTCTKDCTL 333
>L16679-1|AAA28092.5| 2104|Caenorhabditis elegans Muscle positioning
protein 4 protein.
Length = 2104
Score = 30.3 bits (65), Expect = 2.2
Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 12/72 (16%)
Query: 31 TCQCD----HKHPVPLGVANGCAKPKKLGEQCF--YRQTCRAFDAHSSCVQVNHNAYCKC 84
TC+C + PVP C K L +C + C F ++C+ + CKC
Sbjct: 1097 TCKCPLGSKDESPVPKLPGRSC---KGLVNECNIPHLNNCSHF---ATCIDLEEGYECKC 1150
Query: 85 EPGYHSTSHSRP 96
+P YH +P
Sbjct: 1151 KPEYHDQKPEQP 1162
Score = 29.5 bits (63), Expect = 3.8
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Query: 31 TCQCDH--KHPVPLGVANGCAKPKKLGEQCFYRQTCRA-FDAHSSCVQVNHNAYCKCEPG 87
TC+C+ P V + +K +C +QT D +++CV C C+PG
Sbjct: 97 TCRCNSGFADTSPDKVNKPGRQCQKTTNECGAKQTYGVDCDENAACVDTPEGFQCVCQPG 156
Query: 88 YHSTSHS 94
Y S S
Sbjct: 157 YADVSTS 163
Score = 29.1 bits (62), Expect = 5.1
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 9/75 (12%)
Query: 16 CNPKLVHVFCDPATSTCQCDHKHPVPLGVANGCAKPKKLGEQCF--YRQTCRAFDAHSSC 73
C+P H C +C+ P + A G A P G C Y Q +S+C
Sbjct: 1681 CSP---HARCIDLDYLYKCECIRPY-VNSAVGDALP---GSVCSIDYCQDVNYCPLNSTC 1733
Query: 74 VQVNHNAYCKCEPGY 88
V V+ A C C+PG+
Sbjct: 1734 VNVDEQARCDCKPGF 1748
>AF289202-1|AAK69172.1| 2104|Caenorhabditis elegans transmembrane
matrix receptor MUP-4 protein.
Length = 2104
Score = 30.3 bits (65), Expect = 2.2
Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 12/72 (16%)
Query: 31 TCQCD----HKHPVPLGVANGCAKPKKLGEQCF--YRQTCRAFDAHSSCVQVNHNAYCKC 84
TC+C + PVP C K L +C + C F ++C+ + CKC
Sbjct: 1097 TCKCPLGSKDESPVPKLPGRSC---KGLVNECNIPHLNNCSHF---ATCIDLEEGYECKC 1150
Query: 85 EPGYHSTSHSRP 96
+P YH +P
Sbjct: 1151 KPEYHDQKPEQP 1162
Score = 29.5 bits (63), Expect = 3.8
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Query: 31 TCQCDH--KHPVPLGVANGCAKPKKLGEQCFYRQTCRA-FDAHSSCVQVNHNAYCKCEPG 87
TC+C+ P V + +K +C +QT D +++CV C C+PG
Sbjct: 97 TCRCNSGFADTSPDKVNKPGRQCQKTTNECGAKQTYGVDCDENAACVDTPEGFQCVCQPG 156
Query: 88 YHSTSHS 94
Y S S
Sbjct: 157 YADVSTS 163
Score = 29.1 bits (62), Expect = 5.1
Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 9/75 (12%)
Query: 16 CNPKLVHVFCDPATSTCQCDHKHPVPLGVANGCAKPKKLGEQCF--YRQTCRAFDAHSSC 73
C+P H C +C+ P + A G A P G C Y Q +S+C
Sbjct: 1681 CSP---HARCIDLDYLYKCECIRPY-VNSAVGDALP---GSVCSIDYCQDVNYCPLNSTC 1733
Query: 74 VQVNHNAYCKCEPGY 88
V V+ A C C+PG+
Sbjct: 1734 VNVDEQARCDCKPGF 1748
>Z81110-6|CAB03261.1| 3191|Caenorhabditis elegans Hypothetical protein
T01D3.1 protein.
Length = 3191
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/23 (47%), Positives = 13/23 (56%), Gaps = 4/23 (17%)
Query: 12 CEFTCNPKLVHVFCDPATSTCQC 34
C+F CN H C+P T TC C
Sbjct: 1237 CDFDCN----HGICEPLTKTCSC 1255
>Z81094-8|CAB03155.1| 3191|Caenorhabditis elegans Hypothetical protein
T01D3.1 protein.
Length = 3191
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/23 (47%), Positives = 13/23 (56%), Gaps = 4/23 (17%)
Query: 12 CEFTCNPKLVHVFCDPATSTCQC 34
C+F CN H C+P T TC C
Sbjct: 1237 CDFDCN----HGICEPLTKTCSC 1255
>Z73971-10|CAA98251.1| 838|Caenorhabditis elegans Hypothetical
protein C50H2.3 protein.
Length = 838
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 50 KPKKLGEQCFYRQTCRAFDAHSSCVQV--NHNAYCKCEPGYHSTS 92
KP L + C + C+ + +C+ V YCKC+PG+H +
Sbjct: 545 KPN-LTDTCLAKNPCKN---NGTCIFVWKKDTHYCKCQPGFHGNN 585
>U58750-13|AAB00653.1| 616|Caenorhabditis elegans Hypothetical
protein F55G1.13 protein.
Length = 616
Score = 29.1 bits (62), Expect = 5.1
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 56 EQCFYRQT-CRAFDAHSSCVQVNHNAYCKCEPGYHSTS 92
++C T C+ D ++CV N + YC C P S
Sbjct: 486 DECVEDTTLCKTKDPDATCVNTNGSYYCVCSPNMFGKS 523
>U33934-1|AAA96507.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 50 KPKKLGEQCFYRQTCRAFDAHSSCVQV--NHNAYCKCEPGYHSTS 92
KP L + C + C+ + +C+ V YCKC+PG+H +
Sbjct: 545 KPN-LTDTCLAKNPCKN---NGTCIFVWKKDTHYCKCQPGFHGNN 585
>U33933-1|AAA96506.1| 838|Caenorhabditis elegans MEC-9L protein.
Length = 838
Score = 29.1 bits (62), Expect = 5.1
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 6/45 (13%)
Query: 50 KPKKLGEQCFYRQTCRAFDAHSSCVQV--NHNAYCKCEPGYHSTS 92
KP L + C + C+ + +C+ V YCKC+PG+H +
Sbjct: 545 KPN-LTDTCLAKNPCKN---NGTCIFVWKKDTHYCKCQPGFHGNN 585
>Z81091-2|CAB03143.2| 2972|Caenorhabditis elegans Hypothetical protein
F55H12.3 protein.
Length = 2972
Score = 28.3 bits (60), Expect = 8.8
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 56 EQCFYRQTCRAFDAHSSCVQVNHNAY-CKCEPGYHSTS 92
E CF TC F+ +++ +V+ +Y C C+ GY T+
Sbjct: 1769 EPCFNGGTCSIFN-YNTTTKVSIESYNCTCQTGYFGTN 1805
>Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical
protein R107.8 protein.
Length = 1429
Score = 28.3 bits (60), Expect = 8.8
Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 11/65 (16%)
Query: 24 FCDPATSTCQCDHKHPVPLGVANGCAKPKKLGEQCFYRQTCRAFDAHSSCVQVNHNAYCK 83
FCD A+S CQC P G + + + C C +H C+ + C
Sbjct: 226 FCDKASSKCQC------PPGYHGSTCELLEKEDSC-ASNPC----SHGVCISFSGGFQCI 274
Query: 84 CEPGY 88
C+ GY
Sbjct: 275 CDDGY 279
>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
protein F48E3.8a protein.
Length = 2427
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 45 ANGCAKPKKLGEQCFYRQTCRAFDAHSSCVQVNHNAYCKCEPGYHSTSH 93
A C ++ GE C Y Q C A + + C+++ C+C G +S+
Sbjct: 95 AGVCMTVQQPGEPCQYSQQCSALEPGAYCLKMR----CECVYGMKKSSN 139
>U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical
protein F48E3.8b protein.
Length = 1299
Score = 28.3 bits (60), Expect = 8.8
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 45 ANGCAKPKKLGEQCFYRQTCRAFDAHSSCVQVNHNAYCKCEPGYHSTSH 93
A C ++ GE C Y Q C A + + C+++ C+C G +S+
Sbjct: 95 AGVCMTVQQPGEPCQYSQQCSALEPGAYCLKMR----CECVYGMKKSSN 139
>M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein (
C.elegans homeotic lin-12 protein gene, complete cds. ).
Length = 1429
Score = 28.3 bits (60), Expect = 8.8
Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 11/65 (16%)
Query: 24 FCDPATSTCQCDHKHPVPLGVANGCAKPKKLGEQCFYRQTCRAFDAHSSCVQVNHNAYCK 83
FCD A+S CQC P G + + + C C +H C+ + C
Sbjct: 226 FCDKASSKCQC------PPGYHGSTCELLEKEDSC-ASNPC----SHGVCISFSGGFQCI 274
Query: 84 CEPGY 88
C+ GY
Sbjct: 275 CDDGY 279
>AY037802-1|AAK94767.1| 669|Caenorhabditis elegans GLY-2 protein.
Length = 669
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 65 RAFDAHSSCVQVNHNAYCKCEPGYHSTSHSRPTYR 99
R +A SC + H+ CEP Y +S P R
Sbjct: 573 RTLNADDSCETICHSKQLLCEPSYFPIINSSPLLR 607
>AY037800-1|AAK94765.1| 661|Caenorhabditis elegans GLY-2 protein.
Length = 661
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 65 RAFDAHSSCVQVNHNAYCKCEPGYHSTSHSRPTYR 99
R +A SC + H+ CEP Y +S P R
Sbjct: 565 RTLNADDSCETICHSKQLLCEPSYFPIINSSPLLR 599
>AF154122-1|AAF74523.1| 669|Caenorhabditis elegans
N-acetylglucosaminyltransferase V protein.
Length = 669
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 65 RAFDAHSSCVQVNHNAYCKCEPGYHSTSHSRPTYR 99
R +A SC + H+ CEP Y +S P R
Sbjct: 573 RTLNADDSCETICHSKQLLCEPSYFPIINSSPLLR 607
>AC006625-9|AAK68273.1| 669|Caenorhabditis elegans Glycosylation
related protein 2 protein.
Length = 669
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/35 (34%), Positives = 16/35 (45%)
Query: 65 RAFDAHSSCVQVNHNAYCKCEPGYHSTSHSRPTYR 99
R +A SC + H+ CEP Y +S P R
Sbjct: 573 RTLNADDSCETICHSKQLLCEPSYFPIINSSPLLR 607
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.325 0.137 0.454
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,999,545
Number of Sequences: 27539
Number of extensions: 247045
Number of successful extensions: 989
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 803
Number of HSP's gapped (non-prelim): 190
length of query: 357
length of database: 12,573,161
effective HSP length: 82
effective length of query: 275
effective length of database: 10,314,963
effective search space: 2836614825
effective search space used: 2836614825
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 60 (28.3 bits)
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