Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002533-TA|BGIBMGA002533-PA|undefined
(100 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68314-10|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical p... 33 0.026
Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical p... 33 0.026
AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator comp... 33 0.026
Z67995-4|CAI79213.1| 150|Caenorhabditis elegans Hypothetical pr... 28 1.3
U23448-8|AAL27226.1| 849|Caenorhabditis elegans Dnaj domain (pr... 27 3.0
U23448-7|AAM81128.1| 868|Caenorhabditis elegans Dnaj domain (pr... 27 3.0
U23448-6|AAL27225.1| 915|Caenorhabditis elegans Dnaj domain (pr... 27 3.0
U23448-5|AAL27227.1| 912|Caenorhabditis elegans Dnaj domain (pr... 27 3.0
U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related... 26 5.3
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 26 5.3
Z81110-6|CAB03261.1| 3191|Caenorhabditis elegans Hypothetical pr... 25 7.0
Z81094-8|CAB03155.1| 3191|Caenorhabditis elegans Hypothetical pr... 25 7.0
Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical pr... 25 7.0
Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical pr... 25 7.0
U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crum... 25 7.0
M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein ( C.ele... 25 7.0
AF099001-4|AAC68733.1| 215|Caenorhabditis elegans Hypothetical ... 25 7.0
Z93397-6|CAB07718.2| 550|Caenorhabditis elegans Hypothetical pr... 25 9.3
Z73896-2|CAA98055.1| 356|Caenorhabditis elegans Hypothetical pr... 25 9.3
U42833-1|AAA83575.1| 724|Caenorhabditis elegans Hypothetical pr... 25 9.3
U34596-1|AAA97605.1| 570|Caenorhabditis elegans SMA-4 protein. 25 9.3
U00066-5|AAA50739.2| 565|Caenorhabditis elegans Small protein 4... 25 9.3
>Z68314-10|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical
protein K08F8.6 protein.
Length = 2862
Score = 33.5 bits (73), Expect = 0.026
Identities = 20/44 (45%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 19 LPPAAEKLLNTIFCNCKKGCRGRVAV-FCSVYHCQGQSCSNVQL 61
LPP EK LN F K GCRG V+ C+ QG+S V L
Sbjct: 513 LPPLKEKFLNWKFTAKKYGCRGDVSCRHCAEAEYQGESDGQVIL 556
>Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical
protein K08F8.6 protein.
Length = 2862
Score = 33.5 bits (73), Expect = 0.026
Identities = 20/44 (45%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 19 LPPAAEKLLNTIFCNCKKGCRGRVAV-FCSVYHCQGQSCSNVQL 61
LPP EK LN F K GCRG V+ C+ QG+S V L
Sbjct: 513 LPPLKEKFLNWKFTAKKYGCRGDVSCRHCAEAEYQGESDGQVIL 556
>AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator complex
subunit Med13 protein.
Length = 2862
Score = 33.5 bits (73), Expect = 0.026
Identities = 20/44 (45%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 19 LPPAAEKLLNTIFCNCKKGCRGRVAV-FCSVYHCQGQSCSNVQL 61
LPP EK LN F K GCRG V+ C+ QG+S V L
Sbjct: 513 LPPLKEKFLNWKFTAKKYGCRGDVSCRHCAEAEYQGESDGQVIL 556
>Z67995-4|CAI79213.1| 150|Caenorhabditis elegans Hypothetical
protein M153.4 protein.
Length = 150
Score = 27.9 bits (59), Expect = 1.3
Identities = 11/18 (61%), Positives = 12/18 (66%)
Query: 15 NFTPLPPAAEKLLNTIFC 32
NFTP PP A K T+FC
Sbjct: 22 NFTPGPPRATKSAPTVFC 39
>U23448-8|AAL27226.1| 849|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform b
protein.
Length = 849
Score = 26.6 bits (56), Expect = 3.0
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 4 KSTEPRRLGLENFTPLPPAAEKLLNTIFCNCKKGCRGRVAVFCSVYHCQGQSC 56
K+ E + + + A E+ NTIFC+C + RVA S+ Q +SC
Sbjct: 726 KNNEVHEQLISVWNDMTKAVEEARNTIFCDC-ENTHFRVAT--SISPSQARSC 775
>U23448-7|AAM81128.1| 868|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform d
protein.
Length = 868
Score = 26.6 bits (56), Expect = 3.0
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 4 KSTEPRRLGLENFTPLPPAAEKLLNTIFCNCKKGCRGRVAVFCSVYHCQGQSC 56
K+ E + + + A E+ NTIFC+C + RVA S+ Q +SC
Sbjct: 726 KNNEVHEQLISVWNDMTKAVEEARNTIFCDC-ENTHFRVAT--SISPSQARSC 775
>U23448-6|AAL27225.1| 915|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform a
protein.
Length = 915
Score = 26.6 bits (56), Expect = 3.0
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 4 KSTEPRRLGLENFTPLPPAAEKLLNTIFCNCKKGCRGRVAVFCSVYHCQGQSC 56
K+ E + + + A E+ NTIFC+C + RVA S+ Q +SC
Sbjct: 726 KNNEVHEQLISVWNDMTKAVEEARNTIFCDC-ENTHFRVAT--SISPSQARSC 775
>U23448-5|AAL27227.1| 912|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 5, isoform c
protein.
Length = 912
Score = 26.6 bits (56), Expect = 3.0
Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 4 KSTEPRRLGLENFTPLPPAAEKLLNTIFCNCKKGCRGRVAVFCSVYHCQGQSC 56
K+ E + + + A E+ NTIFC+C + RVA S+ Q +SC
Sbjct: 725 KNNEVHEQLISVWNDMTKAVEEARNTIFCDC-ENTHFRVAT--SISPSQARSC 774
>U46673-4|AAC48152.2| 1535|Caenorhabditis elegans Laminin related.
see also lmb-protein 2 protein.
Length = 1535
Score = 25.8 bits (54), Expect = 5.3
Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 5/50 (10%)
Query: 27 LNTIFCNCKKGCRGRVAVFCSVYH----CQG-QSCSNVQLRTIEDSCDFN 71
+NT C CK G G+ C+ YH G Q C + + CD N
Sbjct: 945 VNTGQCQCKPGVTGQRCDRCADYHFGFSANGCQPCDCEYIGSENQQCDVN 994
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 25.8 bits (54), Expect = 5.3
Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 4/43 (9%)
Query: 35 KKGCRGRVAVFCSVYHCQGQSCSNVQLRTIEDSCDFNEETNDS 77
+ GC GR V +H G SN+ IE C F E ++
Sbjct: 467 RDGCGGRATVLIDEHHLFGGPMSNI----IEQLCSFMLECEET 505
>Z81110-6|CAB03261.1| 3191|Caenorhabditis elegans Hypothetical protein
T01D3.1 protein.
Length = 3191
Score = 25.4 bits (53), Expect = 7.0
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 32 CNCKKGCRGRVAVFCSVYHCQGQS 55
C+C KG G CS+ C+ S
Sbjct: 1253 CSCAKGWMGGACDVCSIGKCENSS 1276
>Z81094-8|CAB03155.1| 3191|Caenorhabditis elegans Hypothetical protein
T01D3.1 protein.
Length = 3191
Score = 25.4 bits (53), Expect = 7.0
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 32 CNCKKGCRGRVAVFCSVYHCQGQS 55
C+C KG G CS+ C+ S
Sbjct: 1253 CSCAKGWMGGACDVCSIGKCENSS 1276
>Z29116-5|CAA82373.1| 1295|Caenorhabditis elegans Hypothetical
protein F02A9.6 protein.
Length = 1295
Score = 25.4 bits (53), Expect = 7.0
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 25 KLLNTIFCNCKKGCRGRVAV-FCSVYHCQGQSC 56
KL+ T +C CKKG G C + +G+ C
Sbjct: 39 KLIETYWCRCKKGFGGAFCERECDLDCKRGEKC 71
>Z19555-7|CAA79620.1| 1295|Caenorhabditis elegans Hypothetical
protein F02A9.6 protein.
Length = 1295
Score = 25.4 bits (53), Expect = 7.0
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 25 KLLNTIFCNCKKGCRGRVAV-FCSVYHCQGQSC 56
KL+ T +C CKKG G C + +G+ C
Sbjct: 39 KLIETYWCRCKKGFGGAFCERECDLDCKRGEKC 71
>U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crumbs
homolog protein 1 protein.
Length = 1722
Score = 25.4 bits (53), Expect = 7.0
Identities = 13/45 (28%), Positives = 15/45 (33%)
Query: 14 ENFTPLPPAAEKLLNTIFCNCKKGCRGRVAVFCSVYHCQGQSCSN 58
ENF E L + C C KG G+ C C N
Sbjct: 169 ENFCQNGADCENLKGSYECKCLKGFSGKYCEIQDKKQCTSDYCHN 213
>M25580-1|AAA28058.1| 1295|Caenorhabditis elegans protein (
C.elegans glp-1 gene,complete cds. ).
Length = 1295
Score = 25.4 bits (53), Expect = 7.0
Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 25 KLLNTIFCNCKKGCRGRVAV-FCSVYHCQGQSC 56
KL+ T +C CKKG G C + +G+ C
Sbjct: 39 KLIETYWCRCKKGFGGAFCERECDLDCKRGEKC 71
>AF099001-4|AAC68733.1| 215|Caenorhabditis elegans Hypothetical
protein R160.6 protein.
Length = 215
Score = 25.4 bits (53), Expect = 7.0
Identities = 10/36 (27%), Positives = 15/36 (41%)
Query: 23 AEKLLNTIFCNCKKGCRGRVAVFCSVYHCQGQSCSN 58
A +L T++C + +F YHC C N
Sbjct: 153 ARYMLGTVYCCPDISIFSMLVIFDEYYHCDITGCKN 188
>Z93397-6|CAB07718.2| 550|Caenorhabditis elegans Hypothetical
protein ZC482.4 protein.
Length = 550
Score = 25.0 bits (52), Expect = 9.3
Identities = 12/42 (28%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 44 VFCS--VYHCQGQSCSNVQLRTIEDSCDFNEETNDSATFEQF 83
+FC + +C ++VQ + + ++C FNE +S T ++F
Sbjct: 11 LFCMSILSNCMADRANDVQ-KALNETCVFNETEINSKTIKKF 51
>Z73896-2|CAA98055.1| 356|Caenorhabditis elegans Hypothetical
protein F09E8.2 protein.
Length = 356
Score = 25.0 bits (52), Expect = 9.3
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 5/46 (10%)
Query: 34 CKKGCRGRVAVFCSVYHCQGQS-CSNVQLRTIEDSCDFNEETNDSA 78
C +GC G CS +G S C N T E D NE N+SA
Sbjct: 209 CHEGCLG----VCSSESSKGCSKCKNGWKLTEEGCADVNECQNESA 250
>U42833-1|AAA83575.1| 724|Caenorhabditis elegans Hypothetical
protein ZK430.8 protein.
Length = 724
Score = 25.0 bits (52), Expect = 9.3
Identities = 9/33 (27%), Positives = 18/33 (54%)
Query: 51 CQGQSCSNVQLRTIEDSCDFNEETNDSATFEQF 83
C+ C ++ RT++ +C+ E+ A F +F
Sbjct: 181 CRKSLCYHLMYRTLDGTCNNLEKPMQGAAFRRF 213
>U34596-1|AAA97605.1| 570|Caenorhabditis elegans SMA-4 protein.
Length = 570
Score = 25.0 bits (52), Expect = 9.3
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 2 ARKSTEPRRLGLENFTPLPPAAEKLLNTIFCNCKK 36
++ S++P N TP+PP A +L T +C++
Sbjct: 116 SQASSQPPPTPTVNPTPIPPNAGAVLTTAMDSCQQ 150
>U00066-5|AAA50739.2| 565|Caenorhabditis elegans Small protein 4,
isoform a protein.
Length = 565
Score = 25.0 bits (52), Expect = 9.3
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 2 ARKSTEPRRLGLENFTPLPPAAEKLLNTIFCNCKK 36
++ S++P N TP+PP A +L T +C++
Sbjct: 111 SQASSQPPPTPTVNPTPIPPNAGAVLTTAMDSCQQ 145
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.322 0.133 0.417
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,286,320
Number of Sequences: 27539
Number of extensions: 80578
Number of successful extensions: 214
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 200
Number of HSP's gapped (non-prelim): 22
length of query: 100
length of database: 12,573,161
effective HSP length: 70
effective length of query: 30
effective length of database: 10,645,431
effective search space: 319362930
effective search space used: 319362930
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 52 (25.0 bits)
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