GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002533-TA|BGIBMGA002533-PA|undefined
         (100 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   3.8  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    21   3.8  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    20   6.6  

>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
          isoform A protein.
          Length = 969

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 11 LGLENFTPLPPAAEKLLNTIFCN 33
          + LENF P     E+LL+ +  N
Sbjct: 33 INLENFFPEENVVEELLSPLTLN 55


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 9/34 (26%), Positives = 14/34 (41%)

Query: 30  IFCNCKKGCRGRVAVFCSVYHCQGQSCSNVQLRT 63
           I  NCK+      A  C ++    Q    + +RT
Sbjct: 170 ILYNCKRTATITAATDCQLWAIDRQCFQTIMMRT 203


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 19.8 bits (39), Expect = 6.6
 Identities = 6/19 (31%), Positives = 11/19 (57%)

Query: 23  AEKLLNTIFCNCKKGCRGR 41
           A ++ N +FC    GC+ +
Sbjct: 155 ASEVANEMFCETTIGCKDK 173


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.322    0.133    0.417 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,244
Number of Sequences: 429
Number of extensions: 799
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 100
length of database: 140,377
effective HSP length: 49
effective length of query: 51
effective length of database: 119,356
effective search space:  6087156
effective search space used:  6087156
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.5 bits)
S2: 38 (19.4 bits)