Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002532-TA|BGIBMGA002532-PA|IPR013032|EGF-like region,
IPR000742|EGF-like, type 3, IPR011489|EMI, IPR009030|Growth factor,
receptor
(853 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBP23A10.10 |ppk32||serine/threonine protein kinase Ppk32 |Schi... 33 0.22
SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces pomb... 31 0.51
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 29 3.6
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 29 3.6
SPCC777.02 |||transcription factor |Schizosaccharomyces pombe|ch... 28 6.3
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 28 6.3
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 28 6.3
SPAC18G6.05c |||translation elongation regulator Gcn1 |Schizosac... 27 8.3
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 27 8.3
SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyc... 27 8.3
>SPBP23A10.10 |ppk32||serine/threonine protein kinase Ppk32
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 749
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 174 KLTKKPTTKIPARINTTPATAIVKLSTETPSAVS 207
KL KP++ +P RI T P ++ K +T PS++S
Sbjct: 599 KLQSKPSSVVPNRITTDPFSSQTKEATSKPSSIS 632
>SPBC4F6.13c |||WD repeat/BOP1NT protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 31.5 bits (68), Expect = 0.51
Identities = 32/123 (26%), Positives = 52/123 (42%), Gaps = 9/123 (7%)
Query: 677 ERCKRPRYDEVRKTDDRMQDIPHNDDAPPPYVRSIFHSPLPELPSTGLSCHYQPISTLDR 736
+R +R R + D D+ +DD R + ++P P+LP Y P +
Sbjct: 248 QRAERERESQSNYAD---HDLWADDDQATVNQRKLDYAPAPKLPPPSHEESYNPPEEYLK 304
Query: 737 NLKQFMRPV----VVQSISPIMLENFRDILECHYDHLPRRSHNLSIDGRCSLAPSMTCCT 792
F + VV + S ++ E F L+ + RR+ L+ID SL P + +
Sbjct: 305 QSSDFPKKYKSLRVVPAYSNLIKEKFERCLDLYLAPRVRRT-KLNIDPE-SLLPKLPTPS 362
Query: 793 ELR 795
ELR
Sbjct: 363 ELR 365
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 28.7 bits (61), Expect = 3.6
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 157 GESCELSMPTTTPATVSKLTKKPTTKIPARINTTPATAIVKLSTETPSAVS 207
G S + + +TP+T++ T +PTT P I T+ + L T PS++S
Sbjct: 290 GSSQDSTTIDSTPSTIATSTLQPTTSSP--ITTSAPSLSSALPTTYPSSLS 338
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 28.7 bits (61), Expect = 3.6
Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 8/109 (7%)
Query: 166 TTTPATVSKLTKK--PTTKIPARINTTPATAIVKLSTETPSAVSQRXXXXXXXXXXXXXX 223
T+TP T S + P T + A ++TP T+ L++ TP S
Sbjct: 2552 TSTPITSSTVVNSSTPITSLTALNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVN 2611
Query: 224 XXXXXXXXERMSEEFSRNTPVATTGM--SATKKLTNSAIETLTKIASTT 270
S + +TP+ ++ + S+T +++A+ T T I S++
Sbjct: 2612 SSTPITS----STALNTSTPITSSSVLNSSTPITSSTALNTSTSITSSS 2656
Score = 28.3 bits (60), Expect = 4.7
Identities = 26/109 (23%), Positives = 45/109 (41%), Gaps = 8/109 (7%)
Query: 166 TTTPATVSKL--TKKPTTKIPARINTTPATAIVKLSTETPSAVSQRXXXXXXXXXXXXXX 223
T+TP T S + T P T ++TP T+ L+T TP S
Sbjct: 1496 TSTPITSSTVVNTSTPITSSTVVNSSTPITSSTVLNTSTPITSSSVLNSSTPITSSSVLN 1555
Query: 224 XXXXXXXXERMSEEFSRNTPVATTGM--SATKKLTNSAIETLTKIASTT 270
S + +TP+ ++ + S+T +++A+ T T I S++
Sbjct: 1556 SSTPITS----STVVNTSTPITSSSVVNSSTPITSSTALNTSTPITSSS 1600
Score = 27.9 bits (59), Expect = 6.3
Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 8/109 (7%)
Query: 166 TTTPATVSKL--TKKPTTKIPARINTTPATAIVKLSTETPSAVSQRXXXXXXXXXXXXXX 223
++TP T S + T P T+ ++TP T+ L++ TP S
Sbjct: 572 SSTPITSSTVVNTSTPITRYSVLNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTALN 631
Query: 224 XXXXXXXXERMSEEFSRNTPVATTGM--SATKKLTNSAIETLTKIASTT 270
S + +TP+ ++ + S+T +++A+ T T I S++
Sbjct: 632 TSTPITS----SSVLNSSTPITSSSVLNSSTPITSSTALNTSTPITSSS 676
Score = 27.9 bits (59), Expect = 6.3
Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 8/109 (7%)
Query: 166 TTTPATVSKL--TKKPTTKIPARINTTPATAIVKLSTETPSAVSQRXXXXXXXXXXXXXX 223
++TP T S T P T ++TP T+ ++T TP S
Sbjct: 860 SSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALN 919
Query: 224 XXXXXXXXERMSEEFSRNTPV-ATTGMSATKKLTNSAI-ETLTKIASTT 270
S + +TP+ ++TG++ + +T+S++ + T I S+T
Sbjct: 920 TSTPITS----SSVLNSSTPITSSTGLNTSTPITSSSVLNSSTPITSST 964
Score = 27.9 bits (59), Expect = 6.3
Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 8/109 (7%)
Query: 166 TTTPATVSKL--TKKPTTKIPARINTTPATAIVKLSTETPSAVSQRXXXXXXXXXXXXXX 223
++TP T S + T P T ++TP T+ L+T TP S
Sbjct: 1820 SSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALN 1879
Query: 224 XXXXXXXXERMSEEFSRNTPV-ATTGMSATKKLTNS-AIETLTKIASTT 270
S + +TP+ ++T ++++ +T+S A+ T T I S++
Sbjct: 1880 TSTPITS----SSVLNSSTPITSSTVLNSSTPITSSTALNTSTPITSSS 1924
Score = 27.9 bits (59), Expect = 6.3
Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 8/109 (7%)
Query: 166 TTTPATVSKL--TKKPTTKIPARINTTPATAIVKLSTETPSAVSQRXXXXXXXXXXXXXX 223
++TP T S + T P T ++TP T+ L+T TP S
Sbjct: 2012 SSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTALN 2071
Query: 224 XXXXXXXXERMSEEFSRNTPV-ATTGMSATKKLTNS-AIETLTKIASTT 270
S + +TP+ ++T ++++ +T+S A+ T T I S++
Sbjct: 2072 TSTPITS----SSVLNSSTPITSSTVLNSSTPITSSTALNTSTPITSSS 2116
Score = 27.5 bits (58), Expect = 8.3
Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 8/109 (7%)
Query: 166 TTTPATVSKL--TKKPTTKIPARINTTPATAIVKLSTETPSAVSQRXXXXXXXXXXXXXX 223
++TP T S + T P T ++TP T+ L+T TP S
Sbjct: 884 SSTPITSSTVVNTSTPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTGLN 943
Query: 224 XXXXXXXXERMSEEFSRNTPV-ATTGMSATKKLTNS-AIETLTKIASTT 270
S + +TP+ ++T ++++ +T+S A+ T T I S++
Sbjct: 944 TSTPITS----SSVLNSSTPITSSTVLNSSTPITSSTALNTSTPITSSS 988
>SPCC777.02 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 632
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 40 KYNITKRVKYRAPMSVRTYVWCFSMPPRCSNWTTEMRD 77
KY I R++ ++ W F +PP S TE+RD
Sbjct: 406 KYGIDLRLQNVGKYNLELMKWHFELPPNLSWKKTELRD 443
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 27.9 bits (59), Expect = 6.3
Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 3/82 (3%)
Query: 128 PNCVNDCEPCDHGTCSPVDGTCRCEDGWQGESCELSMPTTTPATVSKLTKKPTTKIPARI 187
P+ V EP D T S + S + + TTPA V TK P+T +
Sbjct: 501 PHAVTTNEPTDVSTKSK-SAAYHYPATTETVSSKAARSATTPAYVGGATKTPST--TKAV 557
Query: 188 NTTPATAIVKLSTETPSAVSQR 209
+TP+T ST + + +
Sbjct: 558 ESTPSTLPTSASTNAAATTTTK 579
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/42 (28%), Positives = 25/42 (59%)
Query: 166 TTTPATVSKLTKKPTTKIPARINTTPATAIVKLSTETPSAVS 207
TTT +++S K+PT + + + P+++ V+ + TP + S
Sbjct: 446 TTTVSSISTSVKQPTASVASSSVSVPSSSSVQPQSSTPISSS 487
>SPAC18G6.05c |||translation elongation regulator Gcn1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2670
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 689 KTDDRMQDIPHNDDAPPPYVRSIFHSPLPELPSTGLSCHYQP 730
+ +D + +I N +P P++R F S L LP+T +QP
Sbjct: 1715 RLEDVLPEILKNTSSPVPHIRESFISLLIYLPAT-FGSRFQP 1755
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Query: 758 FRD-ILECHYDHLPRRSHNLSIDGRCSLAPS 787
FR+ LE H+D +P + RC +APS
Sbjct: 1028 FRNRFLEIHFDDIPENELETILHKRCKIAPS 1058
>SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 442
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/46 (26%), Positives = 25/46 (54%)
Query: 607 NEKSNFIHIVTTDNPVDEEIFHILTEPEHITAVMGDKEMGRSSVDL 652
N +F + TD P E + +L + + I + +G+ E+G+ + D+
Sbjct: 359 NALKDFNYFSATDVPSAEHVDSVLKDVDVIMSKLGEGELGQLAADI 404
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.314 0.128 0.382
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,184,043
Number of Sequences: 5004
Number of extensions: 120531
Number of successful extensions: 327
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 255
Number of HSP's gapped (non-prelim): 92
length of query: 853
length of database: 2,362,478
effective HSP length: 79
effective length of query: 774
effective length of database: 1,967,162
effective search space: 1522583388
effective search space used: 1522583388
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 58 (27.5 bits)
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