Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002531-TA|BGIBMGA002531-PA|IPR001548|Peptidase M2,
peptidyl-dipeptidase A
(153 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_1090 - 25994366-25995410,25995632-25995971,25997266-25997686 30 0.71
02_05_0981 - 33278735-33278746,33278882-33279022,33279145-332791... 30 0.94
02_05_0326 + 27977888-27977890,27978494-27978569,27978649-27978971 28 2.9
02_01_0653 - 4856197-4856268,4857464-4857506,4857607-4857661,485... 28 2.9
12_01_0750 - 6754126-6755248,6755331-6755791 27 5.0
06_03_0865 - 25516072-25517007 27 6.6
04_01_0179 + 2021977-2024890,2025117-2025610 27 6.6
12_02_0179 - 14952398-14952511,14953333-14953356,14953543-149536... 27 8.7
08_01_0380 - 3376475-3377116,3377722-3377919,3378381-3378556,337... 27 8.7
03_01_0302 - 2361948-2362649,2363422-2363617,2363873-2363997,236... 27 8.7
01_01_0562 + 4126368-4128196,4128517-4128715,4128827-4128886,412... 27 8.7
>12_02_1090 - 25994366-25995410,25995632-25995971,25997266-25997686
Length = 601
Score = 30.3 bits (65), Expect = 0.71
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Query: 83 PLEDWLSSENLRTGEFLGWSYDG-DYCKFSIETAGLQVYGGFYNAAQRHYDVTTFIALFV 141
PL WL S ++ FL S DG + +F + TA L Y F+ YD +A V
Sbjct: 523 PLVPWLPSASIFINIFLLGSIDGRSFMRFGVWTAALLAY-YFFFGLHASYDTAKALAAEV 581
Query: 142 TSALV 146
+ V
Sbjct: 582 AAGKV 586
>02_05_0981 -
33278735-33278746,33278882-33279022,33279145-33279199,
33279787-33279950,33280043-33280139,33280507-33280678,
33281107-33281182,33281545-33281661,33281928-33282007,
33282225-33282398,33282636-33282765,33282855-33282941,
33283039-33283302,33284131-33284256
Length = 564
Score = 29.9 bits (64), Expect = 0.94
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 10 FQIFRALCERTGQFIPGDPTRPLHKCDIYRNPE 42
FQ++ + P DPTR +K D Y +PE
Sbjct: 302 FQLYGCVVSSRDMVTPKDPTRCFNKADYYAHPE 334
>02_05_0326 + 27977888-27977890,27978494-27978569,27978649-27978971
Length = 133
Score = 28.3 bits (60), Expect = 2.9
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 94 RTGEFLGWSYDGDYCKFSIE 113
R EF W YDG+Y F+I+
Sbjct: 60 RAAEFWPWPYDGEYYPFAIQ 79
>02_01_0653 -
4856197-4856268,4857464-4857506,4857607-4857661,
4857867-4857900,4857989-4858083,4858720-4858780,
4858858-4858932
Length = 144
Score = 28.3 bits (60), Expect = 2.9
Identities = 10/18 (55%), Positives = 13/18 (72%)
Query: 47 LNRLMERGSSAPWTHILQ 64
LNR++ G SAPW H L+
Sbjct: 71 LNRIVPEGRSAPWKHTLE 88
>12_01_0750 - 6754126-6755248,6755331-6755791
Length = 527
Score = 27.5 bits (58), Expect = 5.0
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 3/38 (7%)
Query: 71 RLNGEAMRDYFRPLEDWLSSE--NLRTGEFLGWSYDGD 106
R G+ MRD F D + + ++ GE LGW DGD
Sbjct: 483 RFEGD-MRDAFDITFDEIMARMRRIKNGEILGWKLDGD 519
>06_03_0865 - 25516072-25517007
Length = 311
Score = 27.1 bits (57), Expect = 6.6
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Query: 35 CDIYR---NPEAGRILNRLMERGSSAPWTHILQEAIGES 70
CD R +PE L RL+ER + WT I +E G S
Sbjct: 11 CDRIRGPWSPEEDEALRRLVERHGARNWTAIGREIPGRS 49
>04_01_0179 + 2021977-2024890,2025117-2025610
Length = 1135
Score = 27.1 bits (57), Expect = 6.6
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 105 GDYCKFSIETAGLQVYGGFYNAAQRHYDVTTFIALFVTSALVTI 148
GD C SI+ +G V QR + + IAL VT+ + +
Sbjct: 682 GDVCFVSIDASGRPVMSADEEEVQRMHRLKLAIALLVTATVAMV 725
>12_02_0179 -
14952398-14952511,14953333-14953356,14953543-14953670,
14953765-14953891,14953930-14954013,14954245-14954397,
14954478-14954579,14955036-14955128,14955289-14955350,
14955395-14955522,14957053-14957291,14958040-14958471,
14958774-14958912,14960564-14960883
Length = 714
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 43 AGRILNRLMERGSSAPWTHILQEAIGESRLNGEAMR 78
+G + L++ S P LQ+ +G ++LN E MR
Sbjct: 629 SGSDMKNLVKDASMGPLREALQQGVGITKLNKEDMR 664
>08_01_0380 -
3376475-3377116,3377722-3377919,3378381-3378556,
3378681-3379703,3380476-3380593
Length = 718
Score = 26.6 bits (56), Expect = 8.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 43 AGRILNRLMERGSSAPWTHILQEAIGES 70
A IL+ E G S+ W H+L+E IG S
Sbjct: 691 ADGILSGNSEYGLSSDWEHVLKEEIGWS 718
>03_01_0302 -
2361948-2362649,2363422-2363617,2363873-2363997,
2364118-2364180,2364445-2364495,2364597-2364668,
2364779-2364886,2365031-2365135,2365505-2365555,
2365971-2365995,2366234-2366258,2366352-2366439
Length = 536
Score = 26.6 bits (56), Expect = 8.7
Identities = 14/57 (24%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Query: 63 LQEAIGESRLNGEAMRDYFRPLEDWLSSENLRTGEFLGWSYDGDYCKFSIETAGLQV 119
+Q + E + AM FR ++ W++ + G W D C S A L +
Sbjct: 476 IQRRVDEDSILSTAMAQGFRLVDKWINGIHESNGIISSWFCGNDVCS-SFRNATLSI 531
>01_01_0562 + 4126368-4128196,4128517-4128715,4128827-4128886,
4129129-4129233,4129987-4130127,4130223-4130285,
4130925-4131152,4131250-4131333,4132000-4132157,
4132252-4132777,4133641-4133700,4133904-4134026,
4134906-4135181,4135282-4135347,4135500-4135631,
4135977-4136798,4137026-4137306,4137564-4137796,
4138022-4138260,4138367-4138558,4138808-4139080,
4139186-4139332
Length = 2078
Score = 26.6 bits (56), Expect = 8.7
Identities = 16/75 (21%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Query: 45 RILNRLMERGSSAPWTHILQEAIGESRLNGEAMRDYFRPLE---DWLSSENLRTGEFLGW 101
R+L+R + + + + + N E++RD + LE DWL + + G
Sbjct: 1269 RLLSRSTDPAIRSRSKELFMQTLHSVGFNAESLRDQLKALEMYPDWLDDDTIEDITLPGL 1328
Query: 102 SYDGDYCKFSIETAG 116
+ Y + S++ +G
Sbjct: 1329 AELRGYWRGSLDASG 1343
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.325 0.141 0.446
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,392,079
Number of Sequences: 37544
Number of extensions: 178537
Number of successful extensions: 491
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 484
Number of HSP's gapped (non-prelim): 11
length of query: 153
length of database: 14,793,348
effective HSP length: 76
effective length of query: 77
effective length of database: 11,940,004
effective search space: 919380308
effective search space used: 919380308
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 56 (26.6 bits)
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