Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002530-TA|BGIBMGA002530-PA|IPR001548|Peptidase M2,
peptidyl-dipeptidase A
(73 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U56966-4|AAA98719.2| 906|Caenorhabditis elegans Ace(angiotensin... 54 2e-08
AF239999-1|AAF63495.1| 203|Caenorhabditis elegans MDF-2 protein. 26 2.8
AC084158-31|AAK68576.1| 203|Caenorhabditis elegans Mad (yeast m... 26 2.8
Z35604-2|CAA84677.1| 809|Caenorhabditis elegans Hypothetical pr... 25 4.9
U19744-1|AAA85704.1| 809|Caenorhabditis elegans integrin beta p... 25 4.9
Z35604-1|CAA84676.2| 744|Caenorhabditis elegans Hypothetical pr... 25 6.5
U62639-1|AAD09364.1| 925|Caenorhabditis elegans lr protein. 25 6.5
U62281-1|AAD09363.1| 925|Caenorhabditis elegans lipoprotein rec... 25 6.5
L23646-3|AAK67236.1| 1283|Caenorhabditis elegans Hypothetical pr... 25 6.5
AF185706-1|AAD56241.1| 925|Caenorhabditis elegans yolk receptor... 25 6.5
AF036703-1|AAB88554.3| 925|Caenorhabditis elegans Receptor medi... 25 6.5
Z75548-1|CAA99911.1| 776|Caenorhabditis elegans Hypothetical pr... 25 8.5
Z68882-10|CAA93111.1| 397|Caenorhabditis elegans Hypothetical p... 25 8.5
>U56966-4|AAA98719.2| 906|Caenorhabditis elegans Ace(angiotensin
converting enzyme)-like non-peptidase protein 1, isoform
a protein.
Length = 906
Score = 53.6 bits (123), Expect = 2e-08
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 1 MDKLAFLPFALVMDRWRWDVFTGDVRKEQYNCHWWRLREQYQGVKPP 47
++ LPF + D WR+++F G V K + N WW +R +Y+GV+ P
Sbjct: 603 LESFTKLPFTIAADNWRYELFDGTVPKNKLNDRWWEIRNKYEGVRSP 649
>AF239999-1|AAF63495.1| 203|Caenorhabditis elegans MDF-2 protein.
Length = 203
Score = 26.2 bits (55), Expect = 2.8
Identities = 10/29 (34%), Positives = 21/29 (72%), Gaps = 2/29 (6%)
Query: 12 VMDRWRWDVFTGDVRKEQYNCHWWRLREQ 40
V++RW++D+ T ++ +E N H R++E+
Sbjct: 95 VVERWQFDIHTENLAEEGENAH--RVKEE 121
>AC084158-31|AAK68576.1| 203|Caenorhabditis elegans Mad (yeast
mitosis arrest deficient)related protein 2, isoform a
protein.
Length = 203
Score = 26.2 bits (55), Expect = 2.8
Identities = 10/29 (34%), Positives = 21/29 (72%), Gaps = 2/29 (6%)
Query: 12 VMDRWRWDVFTGDVRKEQYNCHWWRLREQ 40
V++RW++D+ T ++ +E N H R++E+
Sbjct: 95 VVERWQFDIHTENLAEEGENAH--RVKEE 121
>Z35604-2|CAA84677.1| 809|Caenorhabditis elegans Hypothetical
protein ZK1058.2 protein.
Length = 809
Score = 25.4 bits (53), Expect = 4.9
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 5 AFLPFALVMDRWRWDVFTGD-VRKEQYNCH 33
A LPFAL W+ TG V K ++ C+
Sbjct: 12 ALLPFALPASDWKTGEVTGKVVEKSEFPCY 41
>U19744-1|AAA85704.1| 809|Caenorhabditis elegans integrin beta
pat-3 protein.
Length = 809
Score = 25.4 bits (53), Expect = 4.9
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 5 AFLPFALVMDRWRWDVFTGD-VRKEQYNCH 33
A LPFAL W+ TG V K ++ C+
Sbjct: 12 ALLPFALPASDWKTGEVTGKVVEKSEFPCY 41
>Z35604-1|CAA84676.2| 744|Caenorhabditis elegans Hypothetical
protein ZK1058.1 protein.
Length = 744
Score = 25.0 bits (52), Expect = 6.5
Identities = 10/28 (35%), Positives = 14/28 (50%)
Query: 44 VKPPVLRSELDFDPGSKYHIPANIPYIR 71
+KP LRS+ D D +P P+ R
Sbjct: 58 IKPLYLRSDRDCDAQRSVELPGQFPFTR 85
>U62639-1|AAD09364.1| 925|Caenorhabditis elegans lr protein.
Length = 925
Score = 25.0 bits (52), Expect = 6.5
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 1 MDKLAFLPFALVMDRWRWDVFTGDVRKE 28
+D +P AL +D R DV+ GDV ++
Sbjct: 555 LDNKLEVPSALAIDYIRHDVYFGDVERQ 582
>U62281-1|AAD09363.1| 925|Caenorhabditis elegans lipoprotein
receptor precursor protein.
Length = 925
Score = 25.0 bits (52), Expect = 6.5
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 1 MDKLAFLPFALVMDRWRWDVFTGDVRKE 28
+D +P AL +D R DV+ GDV ++
Sbjct: 555 LDNKLEVPSALAIDYIRHDVYFGDVERQ 582
>L23646-3|AAK67236.1| 1283|Caenorhabditis elegans Hypothetical protein
F44E2.4 protein.
Length = 1283
Score = 25.0 bits (52), Expect = 6.5
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 1 MDKLAFLPFALVMDRWRWDVF 21
+D+ AF P +++ D +WD F
Sbjct: 1062 LDQFAFRPISIIGDASKWDQF 1082
>AF185706-1|AAD56241.1| 925|Caenorhabditis elegans yolk receptor
RME-2 protein.
Length = 925
Score = 25.0 bits (52), Expect = 6.5
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 1 MDKLAFLPFALVMDRWRWDVFTGDVRKE 28
+D +P AL +D R DV+ GDV ++
Sbjct: 555 LDNKLEVPSALAIDYIRHDVYFGDVERQ 582
>AF036703-1|AAB88554.3| 925|Caenorhabditis elegans Receptor
mediated endocytosis protein2 protein.
Length = 925
Score = 25.0 bits (52), Expect = 6.5
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 1 MDKLAFLPFALVMDRWRWDVFTGDVRKE 28
+D +P AL +D R DV+ GDV ++
Sbjct: 555 LDNKLEVPSALAIDYIRHDVYFGDVERQ 582
>Z75548-1|CAA99911.1| 776|Caenorhabditis elegans Hypothetical
protein R90.1 protein.
Length = 776
Score = 24.6 bits (51), Expect = 8.5
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 46 PPVLRSELDFDPGSKYHIPANIPYIRMR 73
PP +RS + + S H PA+ P +++R
Sbjct: 710 PPSVRSPVVVNKSSVVHAPASSPPVKIR 737
>Z68882-10|CAA93111.1| 397|Caenorhabditis elegans Hypothetical
protein C47E12.7 protein.
Length = 397
Score = 24.6 bits (51), Expect = 8.5
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 9/59 (15%)
Query: 13 MDRWRWDVFTGDVRKEQYNCHW------WR--LREQYQGV-KPPVLRSELDFDPGSKYH 62
+DRWR D F +VR+ C W+ +R++Y V + + ++ F+ K+H
Sbjct: 107 IDRWRMDKFLMEVRRMVRACFTHLAELKWKKDIRDEYWKVFQETTISTDKSFNEALKFH 165
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.328 0.144 0.510
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,003,419
Number of Sequences: 27539
Number of extensions: 69637
Number of successful extensions: 143
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 133
Number of HSP's gapped (non-prelim): 13
length of query: 73
length of database: 12,573,161
effective HSP length: 53
effective length of query: 20
effective length of database: 11,113,594
effective search space: 222271880
effective search space used: 222271880
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 51 (24.6 bits)
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