BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002529-TA|BGIBMGA002529-PA|IPR001548|Peptidase M2,
peptidyl-dipeptidase A
(169 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 25 0.30
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 25 0.30
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 25 0.30
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 25 0.30
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 25 0.30
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 25 0.30
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 25 0.30
AY569719-1|AAS86672.1| 401|Apis mellifera complementary sex det... 25 0.30
AY569718-1|AAS86671.1| 401|Apis mellifera complementary sex det... 25 0.30
AY569715-1|AAS86668.1| 401|Apis mellifera complementary sex det... 25 0.30
AY569714-1|AAS86667.1| 401|Apis mellifera complementary sex det... 25 0.30
AY569713-1|AAS86666.1| 401|Apis mellifera complementary sex det... 25 0.30
AY569711-1|AAS86664.1| 401|Apis mellifera complementary sex det... 25 0.30
AY569702-1|AAS86655.1| 400|Apis mellifera complementary sex det... 25 0.30
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 25 0.30
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 6.4
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 25.4 bits (53), Expect = 0.30
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 4 YDQLHAYVRRRLREAYGPERISRS 27
YDQLH + LRE R SRS
Sbjct: 19 YDQLHNVEEKHLRERTSRRRYSRS 42
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 25.4 bits (53), Expect = 0.30
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 4 YDQLHAYVRRRLREAYGPERISRS 27
YDQLH + LRE R SRS
Sbjct: 19 YDQLHNVEEKHLRERTSRRRYSRS 42
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 25.4 bits (53), Expect = 0.30
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 4 YDQLHAYVRRRLREAYGPERISRS 27
YDQLH + LRE R SRS
Sbjct: 19 YDQLHNVEEKHLRERTSRRRYSRS 42
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 25.4 bits (53), Expect = 0.30
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 4 YDQLHAYVRRRLREAYGPERISRS 27
YDQLH + LRE R SRS
Sbjct: 19 YDQLHNVEEKHLRERTSRRRYSRS 42
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 25.4 bits (53), Expect = 0.30
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 4 YDQLHAYVRRRLREAYGPERISRS 27
YDQLH + LRE R SRS
Sbjct: 19 YDQLHNVEEKHLRERTSRRRYSRS 42
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 25.4 bits (53), Expect = 0.30
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 4 YDQLHAYVRRRLREAYGPERISRS 27
YDQLH + LRE R SRS
Sbjct: 19 YDQLHNVEEKHLRERTSRRRYSRS 42
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 25.4 bits (53), Expect = 0.30
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 4 YDQLHAYVRRRLREAYGPERISRS 27
YDQLH + LRE R SRS
Sbjct: 19 YDQLHNVEEKHLRERTSRRRYSRS 42
>AY569719-1|AAS86672.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 25.4 bits (53), Expect = 0.30
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 4 YDQLHAYVRRRLREAYGPERISRS 27
YDQLH + LRE R SRS
Sbjct: 268 YDQLHNVEEKHLRERTSRRRYSRS 291
>AY569718-1|AAS86671.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 25.4 bits (53), Expect = 0.30
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 4 YDQLHAYVRRRLREAYGPERISRS 27
YDQLH + LRE R SRS
Sbjct: 268 YDQLHNVEEKHLRERTSRRRYSRS 291
>AY569715-1|AAS86668.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 25.4 bits (53), Expect = 0.30
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 4 YDQLHAYVRRRLREAYGPERISRS 27
YDQLH + LRE R SRS
Sbjct: 268 YDQLHNVEEKHLRERTSRRRYSRS 291
>AY569714-1|AAS86667.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 25.4 bits (53), Expect = 0.30
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 4 YDQLHAYVRRRLREAYGPERISRS 27
YDQLH + LRE R SRS
Sbjct: 268 YDQLHNVEEKHLRERTSRRRYSRS 291
>AY569713-1|AAS86666.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 25.4 bits (53), Expect = 0.30
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 4 YDQLHAYVRRRLREAYGPERISRS 27
YDQLH + LRE R SRS
Sbjct: 268 YDQLHNVEEKHLRERTSRRRYSRS 291
>AY569711-1|AAS86664.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 25.4 bits (53), Expect = 0.30
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 4 YDQLHAYVRRRLREAYGPERISRS 27
YDQLH + LRE R SRS
Sbjct: 268 YDQLHNVEEKHLRERTSRRRYSRS 291
>AY569702-1|AAS86655.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 25.4 bits (53), Expect = 0.30
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 4 YDQLHAYVRRRLREAYGPERISRS 27
YDQLH + LRE R SRS
Sbjct: 267 YDQLHNVEEKHLRERTSRRRYSRS 290
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 25.4 bits (53), Expect = 0.30
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 4 YDQLHAYVRRRLREAYGPERISRS 27
YDQLH + LRE R SRS
Sbjct: 268 YDQLHNVEEKHLRERTSRRRYSRS 291
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.0 bits (42), Expect = 6.4
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 4 YDQLHAYVRRRLREAYGPERISRS 27
Y++LH + L E ER SRS
Sbjct: 252 YEKLHNEKEKLLEERTSRERYSRS 275
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.323 0.136 0.447
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,746
Number of Sequences: 429
Number of extensions: 2354
Number of successful extensions: 18
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 16
length of query: 169
length of database: 140,377
effective HSP length: 53
effective length of query: 116
effective length of database: 117,640
effective search space: 13646240
effective search space used: 13646240
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.5 bits)
S2: 41 (20.6 bits)
- SilkBase 1999-2023 -