GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002528-TA|BGIBMGA002528-PA|undefined
         (199 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    28   0.069
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           28   0.069
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    27   0.12 
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                26   0.21 
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    24   1.1  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   7.9  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   7.9  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 27.9 bits (59), Expect = 0.069
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 3/45 (6%)

Query: 78  NNGYPNVD---YNSRNPSSTLRPYDESNGDDRIDINSDPNFRRND 119
           NNG PNV+   +   NP+     Y    G  +I ++S  NF R D
Sbjct: 501 NNGVPNVNSVQWPRLNPNEKSLHYLHIAGPGKIQMDSSTNFGRED 545


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 27.9 bits (59), Expect = 0.069
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 3/45 (6%)

Query: 78  NNGYPNVD---YNSRNPSSTLRPYDESNGDDRIDINSDPNFRRND 119
           NNG PNV+   +   NP+     Y    G  +I ++S  NF R D
Sbjct: 501 NNGVPNVNSVQWPRLNPNEKSLHYLHIAGPGKIQMDSSTNFGRED 545


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 27.1 bits (57), Expect = 0.12
 Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 1/60 (1%)

Query: 72  ISPDISNNGYPNVDYNSRNPSSTLRPYDESNGDDRIDI-NSDPNFRRNDPNFVRNDPNYV 130
           ++    N G  ++   + +P +T+    +  GD  I   NSD +F R   N    DP Y+
Sbjct: 180 VNASTGNGGLVSLVVQAMDPVNTIVYMADDKGDALIVYQNSDESFHRLTSNTFDYDPKYI 239


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 26.2 bits (55), Expect = 0.21
 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 7/67 (10%)

Query: 38  PGNQFDRNYQFSTARPSPTSTPGVYQVSSTPF-NGISP-DISNNGYPNVDYN-----SRN 90
           PG+       ++TA  + TSTPG   + ++P  +G+S  + S +   N D N       N
Sbjct: 215 PGHAQMGRPSYTTATMATTSTPGSGSLPASPADSGVSDVESSTSSGGNEDANLLLKARLN 274

Query: 91  PSSTLRP 97
           P+S+L+P
Sbjct: 275 PNSSLQP 281


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 10/33 (30%), Positives = 19/33 (57%)

Query: 77  SNNGYPNVDYNSRNPSSTLRPYDESNGDDRIDI 109
           +NN Y N +YN+ N ++  + Y   N  ++I +
Sbjct: 97  NNNNYNNYNYNNNNYNNYKKLYYNINYIEQIPV 129


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/16 (43%), Positives = 12/16 (75%)

Query: 54  SPTSTPGVYQVSSTPF 69
           SP ++ G+Y V++ PF
Sbjct: 266 SPLASHGLYYVNTAPF 281


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 5/13 (38%), Positives = 12/13 (92%)

Query: 98  YDESNGDDRIDIN 110
           YD+++GD ++++N
Sbjct: 282 YDDTDGDGKLNVN 294


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.311    0.129    0.381 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,777
Number of Sequences: 429
Number of extensions: 3859
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of query: 199
length of database: 140,377
effective HSP length: 55
effective length of query: 144
effective length of database: 116,782
effective search space: 16816608
effective search space used: 16816608
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 42 (21.0 bits)