Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002527-TA|BGIBMGA002527-PA|IPR001548|Peptidase M2,
peptidyl-dipeptidase A, IPR006025|Peptidase M, neutral zinc
metallopeptidases, zinc-binding site
(649 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC965.12 |||dipeptidyl aminopeptidase |Schizosaccharomyces pom... 30 1.2
SPAC29A4.07 |srb6|med22|mediator complex subunit Srb6 |Schizosac... 29 1.5
SPBC3B8.07c |dsd1|SDCB3B8.07c|dihydroceramide delta-4 desaturase... 27 6.2
SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5 |Schizo... 27 6.2
SPCP31B10.06 |mug190||C2 domain protein |Schizosaccharomyces pom... 27 8.1
SPCC1223.09 |||uricase |Schizosaccharomyces pombe|chr 3|||Manual 27 8.1
SPAC11D3.04c |||SnoaL|Schizosaccharomyces pombe|chr 1|||Manual 27 8.1
SPCC61.03 |||conserved protein|Schizosaccharomyces pombe|chr 3||... 27 8.1
SPAC823.14 |||phosphoric monoester hydrolase |Schizosaccharomyce... 27 8.1
SPBC530.11c |||transcription factor |Schizosaccharomyces pombe|c... 27 8.1
>SPCC965.12 |||dipeptidyl aminopeptidase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 416
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 50 RLRNKKTIASWDYETNLTVHNE-QKLLQVSLEVASETKEYWKETMSYLWHEFEDP 103
+LRNK +A +D+E LT H + K+ Q + V + + +YL+ +F+ P
Sbjct: 39 QLRNKLQLAEFDFENGLTSHTDLVKMRQGQVGVQFFSCFIECKNPNYLYQDFDTP 93
>SPAC29A4.07 |srb6|med22|mediator complex subunit Srb6
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 136
Score = 29.5 bits (63), Expect = 1.5
Identities = 19/84 (22%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 44 LDEQTSRLRNKKTIASWDYETNLTVHNEQKLLQVSLEVASETKEYW---KETMSYLWHEF 100
LD + ++K T+A Y+ + + ++ L+V+ + K YW + S+ ++
Sbjct: 36 LDIAINEGKDKYTVAPEVYQIECHTVSMVRAVEQLLDVSRQIKSYWLTNSLSTSFPTVDY 95
Query: 101 EDPDLKRMFKKYTELGTSALPEDL 124
+PDL+++ + T+L L L
Sbjct: 96 SEPDLEKVKRTLTKLQNHLLEVSL 119
>SPBC3B8.07c |dsd1|SDCB3B8.07c|dihydroceramide delta-4
desaturase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 362
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 6/50 (12%)
Query: 166 ATSSDAEELKYTWLEWHKAAGAPSKSNFTEYVQMENEAAKLNGYDTVAEW 215
A S D + +T+ E P KS ++ E A LNGY+ + +W
Sbjct: 21 ADSEDVHQFYWTYTE------EPHKSRRAAILKAHPEIASLNGYEPLTKW 64
>SPAC14C4.02c |smc5|spr18|Smc5-6 complex SMC subunit Smc5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1065
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/61 (21%), Positives = 29/61 (47%)
Query: 483 QLRESLQGVEPPAPRSEADFDPAAKYHIAADVEYMRYYISYIIQFQFHRSLCQLAGEYAV 542
+L E++Q + + + A + + +Y ++YI ++QF+ L +L G+
Sbjct: 897 KLEENVQCISDRFSKGMSGMGYAGEVRLGKSDDYDKWYIDILVQFREEEGLQKLTGQRQS 956
Query: 543 G 543
G
Sbjct: 957 G 957
>SPCP31B10.06 |mug190||C2 domain protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1188
Score = 27.1 bits (57), Expect = 8.1
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 457 GYLLDLFRYGVFRGTTTVDDYNCHFWQLRESLQGVEPPAPRSEADFDPAAKYHIA---AD 513
G L + R V GT +V D + F +R ++ GV+ A S ++ A+YH+ A
Sbjct: 815 GTLEFMDRQIVAEGTGSVSDVS--FSSIRVNIAGVKITAKSSTSNSSSTAEYHVRSRHAV 872
Query: 514 VEYMRYYISYIIQFQFHRSL 533
+ Y S ++ F+F + L
Sbjct: 873 IPVNNRYRSAVV-FEFRKQL 891
>SPCC1223.09 |||uricase |Schizosaccharomyces pombe|chr 3|||Manual
Length = 296
Score = 27.1 bits (57), Expect = 8.1
Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Query: 141 KATICDYNNRTKCDLHVEPEITN-IFATSSDAEELKYTWLEWHKAAGAPSKSNFTEYVQM 199
K+T + N KC+ PE+T+ IF+TS D + + + AG S + + ++
Sbjct: 157 KSTGSGFTNFHKCEFTTLPEVTDRIFSTSIDCNYTFKHFDTFEELAGFDFNSIYEKVKEI 216
Query: 200 ENEAAKLNGYDTV 212
E L+ ++V
Sbjct: 217 TLETFALDDSESV 229
>SPAC11D3.04c |||SnoaL|Schizosaccharomyces pombe|chr 1|||Manual
Length = 130
Score = 27.1 bits (57), Expect = 8.1
Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Query: 434 EDLESNINQLYKMGLDKIVFLPF--GYLLDLFRYGVFRGTTTVDDYNCHFWQLRESLQGV 491
+D ES I QL+K D + G+L +R V T+DD+ H LR L +
Sbjct: 3 QDSESFIRQLFKAFTDFSTDVESLRGFLTPDYRQLVDGRELTLDDFISHAKALRTHLHRL 62
Query: 492 EPPAPRSEADFDPAAKYHIA 511
+ + + AA HIA
Sbjct: 63 DINVQQIVCQGNKAATVHIA 82
>SPCC61.03 |||conserved protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 327
Score = 27.1 bits (57), Expect = 8.1
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Query: 176 YTWLEWHKAAGAPSKSNFTEYVQMENEAAK-LNGY--DTVAEWWLSEYEATDSEDQFAAL 232
YT ++ + + + ++ E EAA + Y D + +L E + ED
Sbjct: 43 YTGAPYYSSMSSMLFGSDQSHIFCEKEAANVIKSYSPDLIVHPFLREKDKAGPEDSVDKC 102
Query: 233 WAQIKPLYEQIHAYVRG 249
+ IKP+ ++HA V G
Sbjct: 103 FELIKPMMGRLHAIVIG 119
>SPAC823.14 |||phosphoric monoester hydrolase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 229
Score = 27.1 bits (57), Expect = 8.1
Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 7/77 (9%)
Query: 536 LAGEYAVGDSSRLLSNCDIYN-STAAGNALGKMLQLGSSKPWPDAMEAITGQRFMDASGV 594
L + +G+++R+ N + + S + +A KML + +A+E + +D S
Sbjct: 26 LTDNFGMGNANRVNLNQQVLDGSISFRDAFAKMLD-SVHLSYDEALEVLKKNVAIDPS-- 82
Query: 595 LEYFQPLYDWLKAENER 611
F+P Y+W K+++ R
Sbjct: 83 ---FKPFYEWCKSQDIR 96
>SPBC530.11c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 819
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 544 DSSRLLSNCDIYNSTAAGNALGKMLQLGSSK 574
D R++ CD Y S ++ L K LQL SS+
Sbjct: 766 DLGRVIKICDWYQSPSSDVLLSKPLQLNSSE 796
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.134 0.412
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,028,463
Number of Sequences: 5004
Number of extensions: 132052
Number of successful extensions: 322
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 320
Number of HSP's gapped (non-prelim): 10
length of query: 649
length of database: 2,362,478
effective HSP length: 77
effective length of query: 572
effective length of database: 1,977,170
effective search space: 1130941240
effective search space used: 1130941240
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 57 (27.1 bits)
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