GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002525-TA|BGIBMGA002525-PA|IPR007114|Major facilitator
superfamily, IPR005829|Sugar transporter superfamily, IPR011701|Major
facilitator superfamily MFS_1
         (579 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    24   2.5  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    24   2.5  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    24   3.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   4.4  

>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 4/42 (9%)

Query: 28  VKQINFDELLIAAGEFGIY---QILLFFATSPFFLFGVFVYY 66
           + +I+FD L  AA +   Y   Q+L  F  S +F    F Y+
Sbjct: 209 ISEIHFD-LCQAADDLNRYFEVQVLTIFGVSFYFFISTFFYF 249


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 4/42 (9%)

Query: 28  VKQINFDELLIAAGEFGIY---QILLFFATSPFFLFGVFVYY 66
           + +I+FD L  AA +   Y   Q+L  F  S +F    F Y+
Sbjct: 205 ISEIHFD-LCQAADDLNRYFEVQVLTIFGVSFYFFISTFFYF 245


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 10/26 (38%), Positives = 15/26 (57%)

Query: 98  IPIDDSTKFGYSHCQVYDANWDEVLI 123
           +P+D  T   YS   V DA+W  ++I
Sbjct: 46  LPVDLCTHIVYSFIGVNDADWSVLVI 71


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.4 bits (48), Expect = 4.4
 Identities = 12/52 (23%), Positives = 24/52 (46%), Gaps = 2/52 (3%)

Query: 238 MAYLILLEYVTPKYKTMVANMAFALFY--TSFTIAMPWISLACGHWKTISIV 287
           +A  +L E +     +++ N+   + +  TS  +A  WI+     WK I  +
Sbjct: 418 LAIFVLCELLIEGTTSILINVPSLIIHVSTSAYVATVWINSVINRWKFIEFI 469


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.326    0.138    0.447 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,758
Number of Sequences: 317
Number of extensions: 5373
Number of successful extensions: 13
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 12
Number of HSP's gapped (non-prelim): 4
length of query: 579
length of database: 114,650
effective HSP length: 60
effective length of query: 519
effective length of database: 95,630
effective search space: 49631970
effective search space used: 49631970
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 46 (22.6 bits)