GeneModel BLAST Result against fruitfly

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002523-TA|BGIBMGA002523-PA|undefined
         (247 letters)

Database: fruitfly 
           52,641 sequences; 24,830,863 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1158|AAF58763.4| 3574|Drosophila melanogaster CG11895-P...    29   4.5  
AF172329-1|AAF02618.1| 3579|Drosophila melanogaster starry night...    29   7.9  

>AE013599-1158|AAF58763.4| 3574|Drosophila melanogaster CG11895-PA
           protein.
          Length = 3574

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 13/65 (20%), Positives = 29/65 (44%)

Query: 67  LIYQQPSFNPLHLQTYYTRYVMQKYKSFDSWKHKLQAVLDRPSWKPGNTIRFRDMEEDPA 126
           ++Y    FN   +     R +  +   F+   +    + ++P+     T+R RD E+ P 
Sbjct: 332 IVYHHQEFNDTDIARRVRRELRNQSPYFEQALYVASVLEEQPAGAAVTTVRARDPEDSPV 391

Query: 127 IHAQV 131
           +++ V
Sbjct: 392 VYSMV 396


>AF172329-1|AAF02618.1| 3579|Drosophila melanogaster starry night
           protein protein.
          Length = 3579

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 13/65 (20%), Positives = 29/65 (44%)

Query: 67  LIYQQPSFNPLHLQTYYTRYVMQKYKSFDSWKHKLQAVLDRPSWKPGNTIRFRDMEEDPA 126
           ++Y    FN   +     R +  +   F+   +    + ++P+     T+R RD E+ P 
Sbjct: 332 IVYHHQEFNDTDIARRVRRELRNQSPYFELALYVASVLEEQPAGAAVTTVRARDPEDSPV 391

Query: 127 IHAQV 131
           +++ V
Sbjct: 392 VYSMV 396


  Database: fruitfly
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 24,830,863
  Number of sequences in database:  52,641
  
Lambda     K      H
   0.325    0.142    0.462 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,640,785
Number of Sequences: 52641
Number of extensions: 478703
Number of successful extensions: 1361
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1357
Number of HSP's gapped (non-prelim): 4
length of query: 247
length of database: 24,830,863
effective HSP length: 83
effective length of query: 164
effective length of database: 20,461,660
effective search space: 3355712240
effective search space used: 3355712240
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 61 (28.7 bits)