GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002523-TA|BGIBMGA002523-PA|undefined
         (247 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    23   3.4  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    23   3.4  
L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    22   4.5  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   4.5  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   4.5  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   7.9  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   7.9  

>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 112 PGNTIRFRDMEEDPAIHAQVKYNVILPKWCTAY 144
           P +T+R R M +     +++ Y   L  W T Y
Sbjct: 232 PFDTVRRRMMMQSGRAKSEILYKSTLHCWATIY 264


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/33 (30%), Positives = 16/33 (48%)

Query: 112 PGNTIRFRDMEEDPAIHAQVKYNVILPKWCTAY 144
           P +T+R R M +     +++ Y   L  W T Y
Sbjct: 232 PFDTVRRRMMMQSGRAKSEILYKSTLHCWATIY 264


>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
          protein.
          Length = 74

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/21 (33%), Positives = 11/21 (52%)

Query: 18 ILNTPSHHRIHHGSNPYCIDV 38
          + N   H R+H G  PY  ++
Sbjct: 50 VANLRRHLRVHTGERPYACEL 70


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/22 (36%), Positives = 15/22 (68%)

Query: 173 ILVLYIFASLIIFGMILDASPK 194
           +L L + +SL+ FG  L+ +P+
Sbjct: 3   LLFLVLLSSLVTFGWTLEDAPR 24


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/22 (36%), Positives = 15/22 (68%)

Query: 173 ILVLYIFASLIIFGMILDASPK 194
           +L L + +SL+ FG  L+ +P+
Sbjct: 3   LLFLVLLSSLVTFGWTLEDAPR 24


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/19 (47%), Positives = 9/19 (47%)

Query: 20  NTPSHHRIHHGSNPYCIDV 38
           N   H RIH    PY  DV
Sbjct: 134 NLSVHRRIHTKERPYKCDV 152



 Score = 21.4 bits (43), Expect = 7.9
 Identities = 7/15 (46%), Positives = 8/15 (53%)

Query: 24  HHRIHHGSNPYCIDV 38
           H R H G  PY  D+
Sbjct: 222 HTRTHTGEKPYTCDI 236


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 134 NVILPKWCTAYLLTHYGLILYGFHQL 159
           NV+L K     LL  YG I++   Q+
Sbjct: 12  NVVLVKKVKIVLLIFYGSIMFSMTQV 37


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.325    0.142    0.462 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,874
Number of Sequences: 429
Number of extensions: 3214
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 10
length of query: 247
length of database: 140,377
effective HSP length: 56
effective length of query: 191
effective length of database: 116,353
effective search space: 22223423
effective search space used: 22223423
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 43 (21.4 bits)