GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002522-TA|BGIBMGA002522-PA|undefined
         (107 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   2.7  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    21   2.7  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    19   8.3  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.0 bits (42), Expect = 2.7
 Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 3/59 (5%)

Query: 3   TLCRNSTHSSEVSKGLGRMFYLVNPQDSVFETQKEVPNFYVQSWPYFFTFLILEHIILK 61
           T+CR   +  +  KGLG+ + + +      +    + +  VQ W +    LIL   IL+
Sbjct: 166 TVCRTLIYIDDNVKGLGKQYNIAS--SKTLKLSINIISL-VQLWIFQLYLLILCDQILR 221


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 21.0 bits (42), Expect = 2.7
 Identities = 8/21 (38%), Positives = 12/21 (57%)

Query: 41  FYVQSWPYFFTFLILEHIILK 61
           FY Q   YF  + +LE ++ K
Sbjct: 151 FYAQFIVYFLIYAVLEMLLQK 171


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 19.4 bits (38), Expect = 8.3
 Identities = 10/20 (50%), Positives = 12/20 (60%)

Query: 12  SEVSKGLGRMFYLVNPQDSV 31
           S+V   L +M YLV  QD V
Sbjct: 159 SKVFHKLKKMKYLVEVQDEV 178


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.323    0.140    0.444 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,335
Number of Sequences: 317
Number of extensions: 1067
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 107
length of database: 114,650
effective HSP length: 49
effective length of query: 58
effective length of database: 99,117
effective search space:  5748786
effective search space used:  5748786
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.5 bits)
S2: 38 (19.4 bits)