Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002522-TA|BGIBMGA002522-PA|undefined
(107 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC108676-1|AAI08677.1| 445|Homo sapiens hypothetical protein LO... 66 3e-11
AK131284-1|BAD18458.1| 445|Homo sapiens protein ( Homo sapiens ... 66 3e-11
U47924-6|AAB51327.1| 268|Homo sapiens C8 protein. 33 0.17
BC036512-1|AAH36512.1| 268|Homo sapiens cell division cycle ass... 33 0.17
BC002551-1|AAH02551.1| 268|Homo sapiens cell division cycle ass... 33 0.17
BC132775-1|AAI32776.1| 1589|Homo sapiens sterile alpha motif dom... 29 2.1
BC132773-1|AAI32774.1| 1589|Homo sapiens sterile alpha motif dom... 29 2.1
AK000080-1|BAA90932.1| 630|Homo sapiens protein ( Homo sapiens ... 29 2.1
AF445355-1|AAQ04637.1| 1589|Homo sapiens OEF1 protein. 29 2.1
AC000119-1|AAQ96842.1| 630|Homo sapiens unknown protein. 29 2.1
AB095925-1|BAC23101.1| 1595|Homo sapiens KIAA2004 protein protein. 29 2.1
J03866-1|AAA62253.1| 613|Homo sapiens dihydrolipoamide acetyltr... 27 8.5
>BC108676-1|AAI08677.1| 445|Homo sapiens hypothetical protein
LOC392636 protein.
Length = 445
Score = 65.7 bits (153), Expect = 3e-11
Identities = 33/90 (36%), Positives = 57/90 (63%), Gaps = 3/90 (3%)
Query: 14 VSKGLGRMFYLVNPQDSVFETQKEVPNFYVQSWPYFFTFLILEHII-LKLQGKKGIRLND 72
VS+G +FY + P ++ F+T +EVP++ ++ P+F + ++LE ++ L+GK RL+D
Sbjct: 12 VSQGFRMLFYTMKPSETSFQTLEEVPDYVKKATPFFISLMLLELVVSWILKGKPPGRLDD 71
Query: 73 GITSISNGLLLETGRLLWRGGE--AYLYTW 100
+TSIS G+L L +R E +Y+Y W
Sbjct: 72 ALTSISAGVLSRLPSLFFRSIELTSYIYIW 101
>AK131284-1|BAD18458.1| 445|Homo sapiens protein ( Homo sapiens
cDNA FLJ16237 fis, clone HCASM2002754. ).
Length = 445
Score = 65.7 bits (153), Expect = 3e-11
Identities = 33/90 (36%), Positives = 57/90 (63%), Gaps = 3/90 (3%)
Query: 14 VSKGLGRMFYLVNPQDSVFETQKEVPNFYVQSWPYFFTFLILEHII-LKLQGKKGIRLND 72
VS+G +FY + P ++ F+T +EVP++ ++ P+F + ++LE ++ L+GK RL+D
Sbjct: 12 VSQGFRMLFYTMKPSETSFQTLEEVPDYVKKATPFFISLMLLELVVSWILKGKPPGRLDD 71
Query: 73 GITSISNGLLLETGRLLWRGGE--AYLYTW 100
+TSIS G+L L +R E +Y+Y W
Sbjct: 72 ALTSISAGVLSRLPSLFFRSIELTSYIYIW 101
>U47924-6|AAB51327.1| 268|Homo sapiens C8 protein.
Length = 268
Score = 33.1 bits (72), Expect = 0.17
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 63 QGKKGIRLNDGITSISNGLLLETGRLLWRGGEAY 96
QGK+ L++ ++ + G +L TGRLL GG A+
Sbjct: 217 QGKRPSPLSENVSELKEGAILGTGRLLKTGGRAW 250
>BC036512-1|AAH36512.1| 268|Homo sapiens cell division cycle
associated 3 protein.
Length = 268
Score = 33.1 bits (72), Expect = 0.17
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 63 QGKKGIRLNDGITSISNGLLLETGRLLWRGGEAY 96
QGK+ L++ ++ + G +L TGRLL GG A+
Sbjct: 217 QGKRPSPLSENVSELKEGAILGTGRLLKTGGRAW 250
>BC002551-1|AAH02551.1| 268|Homo sapiens cell division cycle
associated 3 protein.
Length = 268
Score = 33.1 bits (72), Expect = 0.17
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 63 QGKKGIRLNDGITSISNGLLLETGRLLWRGGEAY 96
QGK+ L++ ++ + G +L TGRLL GG A+
Sbjct: 217 QGKRPSPLSENVSELKEGAILGTGRLLKTGGRAW 250
>BC132775-1|AAI32776.1| 1589|Homo sapiens sterile alpha motif domain
containing 9 protein.
Length = 1589
Score = 29.5 bits (63), Expect = 2.1
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 11/85 (12%)
Query: 5 CRNSTHSSEVSKGLGRMFYLVNPQDSVFETQKEVPNFYVQSWPYFFTFLILEHIILKLQG 64
CR + + + K G + YL+ Q+ T K + N Y TFL LE +K+Q
Sbjct: 1332 CRRNLVALKADKFSGLLEYLIKSQEDAISTMKCIVNEY--------TFL-LEQCTVKIQS 1382
Query: 65 KKGIRLNDGITSISNGLLLETGRLL 89
K+ +LN + +I + T RL+
Sbjct: 1383 KE--KLNFILANIILSCIQPTSRLV 1405
>BC132773-1|AAI32774.1| 1589|Homo sapiens sterile alpha motif domain
containing 9 protein.
Length = 1589
Score = 29.5 bits (63), Expect = 2.1
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 11/85 (12%)
Query: 5 CRNSTHSSEVSKGLGRMFYLVNPQDSVFETQKEVPNFYVQSWPYFFTFLILEHIILKLQG 64
CR + + + K G + YL+ Q+ T K + N Y TFL LE +K+Q
Sbjct: 1332 CRRNLVALKADKFSGLLEYLIKSQEDAISTMKCIVNEY--------TFL-LEQCTVKIQS 1382
Query: 65 KKGIRLNDGITSISNGLLLETGRLL 89
K+ +LN + +I + T RL+
Sbjct: 1383 KE--KLNFILANIILSCIQPTSRLV 1405
>AK000080-1|BAA90932.1| 630|Homo sapiens protein ( Homo sapiens
cDNA FLJ20073 fis, clone COL02320. ).
Length = 630
Score = 29.5 bits (63), Expect = 2.1
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 11/85 (12%)
Query: 5 CRNSTHSSEVSKGLGRMFYLVNPQDSVFETQKEVPNFYVQSWPYFFTFLILEHIILKLQG 64
CR + + + K G + YL+ Q+ T K + N Y TFL LE +K+Q
Sbjct: 373 CRRNLVALKADKFSGLLEYLIKSQEDAISTMKCIVNEY--------TFL-LEQCTVKIQS 423
Query: 65 KKGIRLNDGITSISNGLLLETGRLL 89
K+ +LN + +I + T RL+
Sbjct: 424 KE--KLNFILANIILSCIQPTSRLV 446
>AF445355-1|AAQ04637.1| 1589|Homo sapiens OEF1 protein.
Length = 1589
Score = 29.5 bits (63), Expect = 2.1
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 11/85 (12%)
Query: 5 CRNSTHSSEVSKGLGRMFYLVNPQDSVFETQKEVPNFYVQSWPYFFTFLILEHIILKLQG 64
CR + + + K G + YL+ Q+ T K + N Y TFL LE +K+Q
Sbjct: 1332 CRRNLVALKADKFSGLLEYLIKSQEDAISTMKCIVNEY--------TFL-LEQCTVKIQS 1382
Query: 65 KKGIRLNDGITSISNGLLLETGRLL 89
K+ +LN + +I + T RL+
Sbjct: 1383 KE--KLNFILANIILSCIQPTSRLV 1405
>AC000119-1|AAQ96842.1| 630|Homo sapiens unknown protein.
Length = 630
Score = 29.5 bits (63), Expect = 2.1
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 11/85 (12%)
Query: 5 CRNSTHSSEVSKGLGRMFYLVNPQDSVFETQKEVPNFYVQSWPYFFTFLILEHIILKLQG 64
CR + + + K G + YL+ Q+ T K + N Y TFL LE +K+Q
Sbjct: 373 CRRNLVALKADKFSGLLEYLIKSQEDAISTMKCIVNEY--------TFL-LEQCTVKIQS 423
Query: 65 KKGIRLNDGITSISNGLLLETGRLL 89
K+ +LN + +I + T RL+
Sbjct: 424 KE--KLNFILANIILSCIQPTSRLV 446
>AB095925-1|BAC23101.1| 1595|Homo sapiens KIAA2004 protein protein.
Length = 1595
Score = 29.5 bits (63), Expect = 2.1
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 11/85 (12%)
Query: 5 CRNSTHSSEVSKGLGRMFYLVNPQDSVFETQKEVPNFYVQSWPYFFTFLILEHIILKLQG 64
CR + + + K G + YL+ Q+ T K + N Y TFL LE +K+Q
Sbjct: 1338 CRRNLVALKADKFSGLLEYLIKSQEDAISTMKCIVNEY--------TFL-LEQCTVKIQS 1388
Query: 65 KKGIRLNDGITSISNGLLLETGRLL 89
K+ +LN + +I + T RL+
Sbjct: 1389 KE--KLNFILANIILSCIQPTSRLV 1411
>J03866-1|AAA62253.1| 613|Homo sapiens dihydrolipoamide
acetyltransferase protein.
Length = 613
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/48 (25%), Positives = 27/48 (56%)
Query: 31 VFETQKEVPNFYVQSWPYFFTFLILEHIILKLQGKKGIRLNDGITSIS 78
+ ++++ +P++Y+ S Y L+ + + L+G+ I +ND I S
Sbjct: 403 LMQSKQTIPHYYLLSCKYGEVLLVRKELNKILEGRSKISVNDFIIKAS 450
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.323 0.140 0.444
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,634,952
Number of Sequences: 224733
Number of extensions: 595717
Number of successful extensions: 801
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 793
Number of HSP's gapped (non-prelim): 14
length of query: 107
length of database: 73,234,838
effective HSP length: 79
effective length of query: 28
effective length of database: 55,480,931
effective search space: 1553466068
effective search space used: 1553466068
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 58 (27.5 bits)
- SilkBase 1999-2023 -