Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002521-TA|BGIBMGA002521-PA|IPR000101|Gamma-
glutamyltranspeptidase
(526 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF068719-3|AAM45352.1| 603|Caenorhabditis elegans Hypothetical ... 123 4e-28
AF068719-2|AAC17783.1| 633|Caenorhabditis elegans Hypothetical ... 123 4e-28
Z99284-1|CAB16541.2| 607|Caenorhabditis elegans Hypothetical pr... 105 1e-22
Z92838-5|CAB07404.2| 578|Caenorhabditis elegans Hypothetical pr... 93 6e-19
AC006624-7|AAF39787.1| 642|Caenorhabditis elegans Hypothetical ... 73 7e-13
U97009-3|AAC69031.1| 619|Caenorhabditis elegans Hypothetical pr... 70 5e-12
Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical pr... 32 1.1
Z81461-1|CAB03833.1| 944|Caenorhabditis elegans Hypothetical pr... 30 3.5
Z75554-8|CAA99959.2| 259|Caenorhabditis elegans Hypothetical pr... 30 3.5
L14745-16|AAA27916.2| 1010|Caenorhabditis elegans Kinetochore nu... 30 4.6
AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical ... 29 6.1
AC024880-1|AAR12985.1| 634|Caenorhabditis elegans Hypothetical ... 29 6.1
Z69659-2|CAA93485.1| 167|Caenorhabditis elegans Hypothetical pr... 29 8.0
Z68315-7|CAA92672.1| 735|Caenorhabditis elegans Hypothetical pr... 29 8.0
U23830-1|AAB01508.1| 730|Caenorhabditis elegans suf-1 protein. 29 8.0
L39893-1|AAA62311.1| 735|Caenorhabditis elegans cleavage stimul... 29 8.0
>AF068719-3|AAM45352.1| 603|Caenorhabditis elegans Hypothetical
protein H14N18.4b protein.
Length = 603
Score = 123 bits (296), Expect = 4e-28
Identities = 131/473 (27%), Positives = 214/473 (45%), Gaps = 44/473 (9%)
Query: 11 VVAPHHLATQSAIDILREGGTXXXXXXXXXXTISVVYPHMNSIGGDSFWLIVPPH-GDPI 69
V + H L ++ D+L EGG I V P + IGG + G
Sbjct: 77 VTSDHGLCSEIGRDVLIEGGNAVDAMIASLLCIGTVNPQSSGIGGGFVMTLYNASTGMCQ 136
Query: 70 AIEASGTAGSLATEDFFKGYDKIPYLGPKAAITVAGAVGGWQEALNYVTENGYQRISVSR 129
I A TA + ATE F K +G K+ T + G W Y G ++S +R
Sbjct: 137 TINARETAPAAATETMFVDNPKESVMGYKSIATPSELHGFWTVFNMY----GSGKVSWAR 192
Query: 130 LLADAIRYAEEGVSVTQSYISNLEKF-KDLNVSSEFRRIYLLDGNNPKMGDILYQKELGT 188
L +I A +G V+ + + KF +D+ V+ + R+Y + GDIL ++ L +
Sbjct: 193 LFQPSITLAHDGFPVSSNLA--MRKFSRDIFVNPKTNRVY-------EEGDILKRQRLAS 243
Query: 189 TLRRLAE--NGLNSFYKGELARTIAEDMATVGMPITESDLQNF-TAIRKTPLRLLLKQG- 244
T LA + + FYKG +A+TIA ++ G + ESDL ++ T I PL G
Sbjct: 244 TYALLANATDPVELFYKGGMAQTIAGEITDNGGFVNESDLASYETTIDDAPLLSTHLPGD 303
Query: 245 -EVFNLPPPTQGLVSLNILGVLEKLNIDGK---NEGELVHATVEATKQAFEMRNDYITDP 300
E+ PPP+ +++ NI+ V+ + DG+ ++ + H +EA K A+ R + D
Sbjct: 304 YEMCGPPPPSSFVITQNIIQVMAQYYKDGQVDLDDPLVYHRLIEAEKFAYAQRTK-LGDV 362
Query: 301 KYM---KIDPNSLLTSQHLSKVASKI-----SLDRAASVGQGKGPG-DTIWMGAMDSKGF 351
K++ K + ++T ++ K+AS I +LD + P T + +DS G
Sbjct: 363 KFVESAKTLVDEMMTEEYTKKIASLIKDTAQTLDYYGGEKKDMAPDHGTSHVSIIDSHGN 422
Query: 352 SVSFIQSVYHEFGSTVVLPKTGILWQNR-------GV--SFTLEKDKLLTLQPGKKPFHT 402
+VS +V GS P GI+W ++ G+ SF + +QPGK+P +
Sbjct: 423 AVSCTSTVNQILGSMRASPTLGIVWNDQMDDFSTPGMKNSFGYAPSETNFIQPGKRPMSS 482
Query: 403 LN-LATARLNDGRV-MIFGTRGGDGQPQTQSAIFYRHVGQGLNLQAAVSAPRW 453
++ + N+ RV M+ G GG + R + ++AAV APR+
Sbjct: 483 MSPMIIYNKNENRVEMVTGASGGSYIISATAQTVIRTLLFNQTVKAAVDAPRF 535
>AF068719-2|AAC17783.1| 633|Caenorhabditis elegans Hypothetical
protein H14N18.4a protein.
Length = 633
Score = 123 bits (296), Expect = 4e-28
Identities = 131/473 (27%), Positives = 214/473 (45%), Gaps = 44/473 (9%)
Query: 11 VVAPHHLATQSAIDILREGGTXXXXXXXXXXTISVVYPHMNSIGGDSFWLIVPPH-GDPI 69
V + H L ++ D+L EGG I V P + IGG + G
Sbjct: 107 VTSDHGLCSEIGRDVLIEGGNAVDAMIASLLCIGTVNPQSSGIGGGFVMTLYNASTGMCQ 166
Query: 70 AIEASGTAGSLATEDFFKGYDKIPYLGPKAAITVAGAVGGWQEALNYVTENGYQRISVSR 129
I A TA + ATE F K +G K+ T + G W Y G ++S +R
Sbjct: 167 TINARETAPAAATETMFVDNPKESVMGYKSIATPSELHGFWTVFNMY----GSGKVSWAR 222
Query: 130 LLADAIRYAEEGVSVTQSYISNLEKF-KDLNVSSEFRRIYLLDGNNPKMGDILYQKELGT 188
L +I A +G V+ + + KF +D+ V+ + R+Y + GDIL ++ L +
Sbjct: 223 LFQPSITLAHDGFPVSSNLA--MRKFSRDIFVNPKTNRVY-------EEGDILKRQRLAS 273
Query: 189 TLRRLAE--NGLNSFYKGELARTIAEDMATVGMPITESDLQNF-TAIRKTPLRLLLKQG- 244
T LA + + FYKG +A+TIA ++ G + ESDL ++ T I PL G
Sbjct: 274 TYALLANATDPVELFYKGGMAQTIAGEITDNGGFVNESDLASYETTIDDAPLLSTHLPGD 333
Query: 245 -EVFNLPPPTQGLVSLNILGVLEKLNIDGK---NEGELVHATVEATKQAFEMRNDYITDP 300
E+ PPP+ +++ NI+ V+ + DG+ ++ + H +EA K A+ R + D
Sbjct: 334 YEMCGPPPPSSFVITQNIIQVMAQYYKDGQVDLDDPLVYHRLIEAEKFAYAQRTK-LGDV 392
Query: 301 KYM---KIDPNSLLTSQHLSKVASKI-----SLDRAASVGQGKGPG-DTIWMGAMDSKGF 351
K++ K + ++T ++ K+AS I +LD + P T + +DS G
Sbjct: 393 KFVESAKTLVDEMMTEEYTKKIASLIKDTAQTLDYYGGEKKDMAPDHGTSHVSIIDSHGN 452
Query: 352 SVSFIQSVYHEFGSTVVLPKTGILWQNR-------GV--SFTLEKDKLLTLQPGKKPFHT 402
+VS +V GS P GI+W ++ G+ SF + +QPGK+P +
Sbjct: 453 AVSCTSTVNQILGSMRASPTLGIVWNDQMDDFSTPGMKNSFGYAPSETNFIQPGKRPMSS 512
Query: 403 LN-LATARLNDGRV-MIFGTRGGDGQPQTQSAIFYRHVGQGLNLQAAVSAPRW 453
++ + N+ RV M+ G GG + R + ++AAV APR+
Sbjct: 513 MSPMIIYNKNENRVEMVTGASGGSYIISATAQTVIRTLLFNQTVKAAVDAPRF 565
>Z99284-1|CAB16541.2| 607|Caenorhabditis elegans Hypothetical
protein Y7A9A.1 protein.
Length = 607
Score = 105 bits (251), Expect = 1e-22
Identities = 129/505 (25%), Positives = 212/505 (41%), Gaps = 43/505 (8%)
Query: 12 VAPHHLATQSAIDILREGGTXXXXXXXXXXTISVVYPHMNSIGGDSFWLI-VPPHGDPIA 70
VA + A +++ +GG VV P+ IGG F +I + +
Sbjct: 76 VADSRFCAEIARNVIIQGGNAVDAAIAATFCNGVVLPYATGIGGGDFIVIYLKEEKKCVF 135
Query: 71 IEASGTAGSLATEDFFKGYDKIPYLGPKAAITVAGAVGG-WQEALNYVTENGYQRISVSR 129
+ + TA SLATE + +DK +I + G + G W Y G + I S
Sbjct: 136 LNSRETAPSLATEKMYV-HDKDSAQFGYQSIGIPGELHGLWTAYQKY----GSKVIPWSD 190
Query: 130 LLADAIRYAEEGV--SVTQSYISNLEKFKDLNVSSEFRRIYL--LDGNNPKMGDILYQKE 185
L+ A + A+ Y + K+K+ R +Y G K+G+I+
Sbjct: 191 LVMPAAQLAKGFPMHKAMHDYFDRISKYKERPEIEALRNLYTSKFTGEFYKVGEIVANYP 250
Query: 186 LGTTLRRLA--ENGLNSFYKGELARTIAEDMATVGMPITESDLQNFTAIRKTPLRLLLKQ 243
L LR +A ++ + FY G +A I +M G IT DL+N+ L L +
Sbjct: 251 LAKFLRLIANSQDPVQLFYNGSIADGIIREMLANGGIITIDDLRNYRTHVMETLYADLGK 310
Query: 244 GEVFNLPPPTQGLVSLNILGVLEKLNIDGK--NEGELVHATVEATKQAFEMR---NDYIT 298
+ PPP+ ++ I ++ +L D K N+ E H +EA K A+ R DY+
Sbjct: 311 YRICGPPPPSSWAITQAIPRIVARLYRDKKMFNDAEFYHTLIEAEKLAYGQRGQLGDYLF 370
Query: 299 DPKYMKIDPNSLLTSQHLSKVASKISLDRAASVGQ--GKGP----GDTIWMGAMDSKGFS 352
P+ M+I N LT K SK D++ V GP T + +D G +
Sbjct: 371 SPESMQIARN--LTENSFIKYLSKRLKDKSQDVSYYVTSGPAIMDSGTSQISVVDDDGNA 428
Query: 353 VSFIQSVYHEFGSTVVLPKTGILWQNRGVSFT---------LEKDKLLTLQPGKKPFHTL 403
VS ++ FGS +L K G ++ N+ F+ E +QPG++P ++
Sbjct: 429 VSLTSTINTAFGSK-MLSKYGFIYNNQMDDFSTPGFQNHWGFEPTAANYIQPGRRPMSSM 487
Query: 404 N-LATARLNDGRV-MIFGTRGGDGQPQTQSAIFYRHVGQGLNLQAAVSAPRWLYGRIAGD 461
+ ++ G V M+ G GG + R + G + V PR ++ ++
Sbjct: 488 SPTIVFDVSSGNVKMVTGGTGGSKIISAVAQTLIRGLLMGQSAAEIVEMPR-VHNQLT-- 544
Query: 462 AEDTLKIESRFSEETVNYLKERGHD 486
+T ++E+ FSE+ + L ER HD
Sbjct: 545 PYET-EVENDFSEKILEQL-ERDHD 567
>Z92838-5|CAB07404.2| 578|Caenorhabditis elegans Hypothetical
protein T03D8.6 protein.
Length = 578
Score = 92.7 bits (220), Expect = 6e-19
Identities = 106/413 (25%), Positives = 177/413 (42%), Gaps = 38/413 (9%)
Query: 24 DILREGGTXXXXXXXXXXTISVVYPHMNSIGGDSFWLIVPPH-GDPIAIEASGTAGSLAT 82
+ILR+GG + VV P + IGG GD +I+A TA + A+
Sbjct: 53 EILRKGGNSIDASIASMFCLGVVNPQSSGIGGGFLMTYFDQKSGDCYSIDARETAPAAAS 112
Query: 83 EDFFKGYDKIPYLGPKAAITVAGAVGGWQEALNYVTENGYQRISVSRLLADAIRYAEEGV 142
D F G KAA T G W + G +++ L+ +++ A EG
Sbjct: 113 RDMFLNDSDGSKYGFKAAGTPGEIAGYWHIFKKF----GSGKVTWKELVQPSVKLAREGH 168
Query: 143 SVTQSYISNLEKFKDLNVS---SEFRRIYLLDGNNPKMGDILYQKELGTTLRRLAE--NG 197
V+ Y++ + K K+ + S I + + GD+L + +L TL RL N
Sbjct: 169 PVSP-YLATVMKVKERHFRLFPSVKHWINPETNDTYQSGDLLKRPKLAKTLERLGNSPNP 227
Query: 198 LNSFYKGELARTIAEDMATVGMPITESDLQNFTA---IRKTPLRLLLKQGEVFNLPPPTQ 254
+ FY GE+A+T+A++ G ITE DL N+ + + PPP+
Sbjct: 228 VQLFYHGEMAKTLAKEFQEGGGLITEQDLANYKVREYVNSNSNDHFRGTLTMCGGPPPSS 287
Query: 255 GLVSLNILGVLEKLNIDGK-----NEGELVHATVEATKQAFEMRNDYITDPKYMK--IDP 307
V+ I+ + KL +G N+ +++H +EA K A+ R + D ++K ++
Sbjct: 288 FGVTQLIVSAMSKLFPEGHKDDIYNDPKVLHKYIEAMKFAYAQRT-LLGDHDFVKGALEL 346
Query: 308 NSLLTSQHLSKVASKISLDRAASVGQGKG-----PGD--TIWMGAMDSKGFSVSFIQSVY 360
+ LT+ ++ D+A S G P D T + AMD G VS ++
Sbjct: 347 SKNLTTPEYTQWVIDRMTDKAQSSKNYGGIAQYVPPDHGTSHVSAMDQYGNGVSATTTIN 406
Query: 361 HEFGSTVVLPKTGILWQNR-------GV--SFTLEKDKLLTLQPGKKPFHTLN 404
FG+ V + GILW + G+ F + ++PGK+P +++
Sbjct: 407 RWFGAAVESSEYGILWNDEMDDFSTPGMENGFGFAPSETNFIEPGKRPMSSMS 459
>AC006624-7|AAF39787.1| 642|Caenorhabditis elegans Hypothetical
protein C53D5.5 protein.
Length = 642
Score = 72.5 bits (170), Expect = 7e-13
Identities = 121/515 (23%), Positives = 212/515 (41%), Gaps = 44/515 (8%)
Query: 4 KYAPQGMVVAPHHLATQSAIDILREGGTXXXXXXXXXXTISVVYPHMNSIGGDSFWLIV- 62
KY+ + V A + + ++ +IL +GG I V+ H IGG F I
Sbjct: 100 KYS-KAAVAADNEICSEIGRNILLKGGNAVDSAIAALFCIGVMDTHSAGIGGGHFMTIYN 158
Query: 63 PPHGDPIAIEASGTAGSLATEDFFKGYDKIPYLGPKAAITVAGAVGGWQEALNYVTENGY 122
+ I+A A ATE+ ++ +G KA I V G + G + G
Sbjct: 159 ATTKECTVIDAREIAPLAATEEMYRDKWNQSRIGWKA-IAVPGELHGLRTEFERF---GS 214
Query: 123 QRISVSRLLADAIRYAEEGVSVTQSYISNLEKFKDLNVSSEFRRIYLLDGNNPKM---GD 179
++ +LL I EG + + L + + + +E ++ ++ G+
Sbjct: 215 GKVEWRQLLKPTIDLLAEGYPTSHALAKALNQ-NEHQIRAEPTMKNFINPETQRVFQPGE 273
Query: 180 -ILYQKELGTTLRRLAENG--LNSFYKGELARTIAEDMATVGMPITESDLQNFTAI---R 233
I ++ L T R LA + + FY G LA +A++ G I D +N+ +I
Sbjct: 274 QIKTRQNLLETFRLLANSTDPIADFYTGRLAEQLAKEFEANGGIIRLQDFKNYKSIVHDS 333
Query: 234 KTPLRLLLKQGE-VFNLPPPTQGLVSLNILGVLE--KLNIDGKNE-GELVHATVEATKQA 289
K + LK G V PPP+ V+ IL V++ + N+ NE L H +E++K +
Sbjct: 334 KNVIYTKLKNGRGVCGPPPPSGSAVAQAILNVMDGFEYNMKSFNEIATLYHHFLESSKFS 393
Query: 290 FEMRNDYITDPKYMK--IDPNSLLTSQHLSK-VASKISLDRAASVGQGKG----PGD--T 340
+ R+ ++ DP+++ + +TS+ + V SKI+ G P D T
Sbjct: 394 YAARS-WLGDPQFVANATEIAKNITSKEWADWVRSKITDTTHPDDYYGGSFEAPPQDHGT 452
Query: 341 IWMGAMDSKGFSVSFIQSVYHEFGSTVVLPKTGILWQNRGVSFT---------LEKDKLL 391
+ +D+ G +VS ++ G+ V TGILW N F+
Sbjct: 453 THVSIIDADGNAVSVTSTINLYLGALVSSESTGILWNNEMDDFSTPGHPNFFGFPPSPAN 512
Query: 392 TLQPGKKPFHTLN-LATARLNDGRVMIFGTRGGDGQPQTQSAIFYRHVGQGLNLQAAVSA 450
++PGK+P + + L +M G GG + + + +++ AV A
Sbjct: 513 FIRPGKRPMSSQSPLVIFNTKGAELMAVGGAGGSTIISGVAGVALHALWLKADVKQAVDA 572
Query: 451 PRWLYGRIAGDAEDTLKIESRFSEETVNYLKERGH 485
PR ++ ++ + E F + V L +RGH
Sbjct: 573 PR-MHNQL---QPNYTWYEPNFPKAYVKSLIDRGH 603
>U97009-3|AAC69031.1| 619|Caenorhabditis elegans Hypothetical
protein T19H12.6 protein.
Length = 619
Score = 69.7 bits (163), Expect = 5e-12
Identities = 92/383 (24%), Positives = 165/383 (43%), Gaps = 34/383 (8%)
Query: 25 ILREGGTXXXXXXXXXXTISVVYPHMNSIGGDSFWLIVPPHGDPIAIEASGTAGSLATED 84
IL GG + P+ S+GG + +G+ I A TA A D
Sbjct: 238 ILVRGGNAVEAAIAASFCLMGAMPNKASLGGGLMMTVKTKNGNATTIIARETAPMNADID 297
Query: 85 FFKGYDKIPYLGPKAAITVAGAVGGWQEALNYVTENGYQRISVSRLLADAIRYAEEGVSV 144
K ++ ++GPKA+ T G + G A + N R+ L+ I+ +G +
Sbjct: 298 ELKKNPELTHVGPKASGT-PGTLNGLYRAFQKFSSN---RVQWKHLVLPTIQQCNKGFKL 353
Query: 145 TQSYISNLEKFKDLNVSSEFRRIYLLDGNNPKMGDILYQKELGTTLRRLA--ENGLNSFY 202
++ +L+K ++F N K D + L T L +A E+ L++FY
Sbjct: 354 SE----DLKKRSSAPALAQF-----FKANVQK--DKILCTSLSTLLTDIADYESPLDAFY 402
Query: 203 KGELARTIAEDMATVGMPITESDLQNFTAIRKTPLRLLLKQGEVFNLPPPTQGLVSLNIL 262
GE A+ +A+++ G +T SDL+++ + + + E+ ++ G S +
Sbjct: 403 HGETAQKLAKEL---GGYMTASDLEDYESDMSSAI-----CSEI-DVDTKVCGPGSPSSF 453
Query: 263 GVLEKLNIDGKNEGELVHATVEATKQAFEMRNDYITDPKYMKIDPNSLLTSQHLSKVASK 322
VL + KN L A V ++ I DP ++K +S ++ L+K + +
Sbjct: 454 AVLANTYLATKNMSNL--AKVNDVLRSSMGLISKIADPMFVK---SSKKYTEELAKTSKR 508
Query: 323 ISLDRAASVGQGKGPGDTIWMGAMDSKGFSVSFIQSVYHEFGSTVVLPKTGILWQNRGVS 382
S + K G T + +D +VS + S+ +FGS ++ +G W N+
Sbjct: 509 SSSEAKNLAVNFKEDGST-EVFVIDENNMTVSVLLSLGDDFGS-LIYSSSGFFWNNKLRY 566
Query: 383 FTLEKDKL-LTLQPGKKPFHTLN 404
F ++ + + L+LQPGK P L+
Sbjct: 567 FDVKNENVPLSLQPGKVPTSLLS 589
>Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical
protein ZK593.5 protein.
Length = 1326
Score = 31.9 bits (69), Expect = 1.1
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 448 VSAPRWLYGRIAGDAEDTLKIESRFSEETVNYLKERGHDVEILPE 492
+ A R L G ++G + LK+ES F+E+ +N + + V IL E
Sbjct: 883 LKAYRLLPGNVSGSEQKILKLESEFTEDLLNSVVQLDKMVSILQE 927
>Z81461-1|CAB03833.1| 944|Caenorhabditis elegans Hypothetical
protein C04F12.1 protein.
Length = 944
Score = 30.3 bits (65), Expect = 3.5
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 3/73 (4%)
Query: 412 DGRVMIFGTRGGDGQPQTQSAIFYRHVGQGLNLQAAVSAPRWLYGRIAGDAEDTLKIESR 471
DG M+F T+ + + + Q AIF L ++ + +GR +G ++++ S+
Sbjct: 159 DGAAMLFTTQKFETKTEKQQAIFMPIPSDHPKLSTSLKESQ--FGRASGKFHVSIELNSK 216
Query: 472 FSE-ETVNYLKER 483
SE T++ L ER
Sbjct: 217 QSELNTIDLLNER 229
>Z75554-8|CAA99959.2| 259|Caenorhabditis elegans Hypothetical
protein ZC455.10 protein.
Length = 259
Score = 30.3 bits (65), Expect = 3.5
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 116 YVTENGYQRISVSRLLADAIRYAEEGVSVTQSYISNLE 153
+VTE G Q + ++ AD + AE G + Q Y+ LE
Sbjct: 141 WVTEEGIQIDQIHKIEADKCKKAEAGDKIYQQYVLRLE 178
>L14745-16|AAA27916.2| 1010|Caenorhabditis elegans Kinetochore null
protein 1 protein.
Length = 1010
Score = 29.9 bits (64), Expect = 4.6
Identities = 34/169 (20%), Positives = 76/169 (44%), Gaps = 10/169 (5%)
Query: 196 NGLNSFYKGELARTIAEDMATVGMPITESDLQNFTAIRKTPLRLLLKQGEVFNLPPPTQG 255
+G + K + T D+ T E+ +N + I ++ + + + + F L +
Sbjct: 481 DGTLTLPKSNVEVTTTNDVYTSLERQEENASENVSMINESSVHSEIDK-KSFMLIEEERA 539
Query: 256 LVSLNILGVLEKLNIDGKNEGELVHATVEA---TKQAFEMRNDYITDPKYMKIDPNSLL- 311
+ +++ V +KL DG ++ ++ A+ A TK+ + N T M++D N+LL
Sbjct: 540 FMHSSMIDVAQKLEDDGSSKTPVILASQSASLATKEPSALHNSSATLNNSMELDNNTLLK 599
Query: 312 -----TSQHLSKVASKISLDRAASVGQGKGPGDTIWMGAMDSKGFSVSF 355
T + +S V I+++ ++ Q + +T+ + G + +F
Sbjct: 600 TMQITTCEDISMVHESIAVELNSNKEQEQFGDETLQKNDTSNTGANFTF 648
>AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical
protein Y97E10AR.2a protein.
Length = 665
Score = 29.5 bits (63), Expect = 6.1
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 178 GDILYQKELGTTLRRLAEN--GLNSFYKGELARTIAEDMATVGMPITESDLQNFTAI 232
G +L ++ L+ L E+ + FY G+ + I E+M + G I+ DL++++ I
Sbjct: 482 GAVLRNEQYEDFLKLLKESVHAEHDFYGGQFVKIIVEEMKSRGGLISRQDLESYSCI 538
>AC024880-1|AAR12985.1| 634|Caenorhabditis elegans Hypothetical
protein Y97E10AR.2b protein.
Length = 634
Score = 29.5 bits (63), Expect = 6.1
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 178 GDILYQKELGTTLRRLAEN--GLNSFYKGELARTIAEDMATVGMPITESDLQNFTAI 232
G +L ++ L+ L E+ + FY G+ + I E+M + G I+ DL++++ I
Sbjct: 432 GAVLRNEQYEDFLKLLKESVHAEHDFYGGQFVKIIVEEMKSRGGLISRQDLESYSCI 488
>Z69659-2|CAA93485.1| 167|Caenorhabditis elegans Hypothetical
protein F07C6.2 protein.
Length = 167
Score = 29.1 bits (62), Expect = 8.0
Identities = 11/35 (31%), Positives = 22/35 (62%)
Query: 367 VVLPKTGILWQNRGVSFTLEKDKLLTLQPGKKPFH 401
VV +T + + R ++ T+E++K +++ G PFH
Sbjct: 82 VVRRRTETMARTRTIALTMEREKAMSMNGGGPPFH 116
>Z68315-7|CAA92672.1| 735|Caenorhabditis elegans Hypothetical
protein F28C6.6 protein.
Length = 735
Score = 29.1 bits (62), Expect = 8.0
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Query: 86 FKGYDKIPYLGPKAAITVAGAVGGWQEALNYVTENGYQRISVSRLL 131
F G +P GP+AA + G GG + Y G+ R +S+++
Sbjct: 551 FVGSKNVPTHGPQAASAIMGGAGGHADVARY----GFPRPDISQMI 592
>U23830-1|AAB01508.1| 730|Caenorhabditis elegans suf-1 protein.
Length = 730
Score = 29.1 bits (62), Expect = 8.0
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Query: 86 FKGYDKIPYLGPKAAITVAGAVGGWQEALNYVTENGYQRISVSRLL 131
F G +P GP+AA + G GG + Y G+ R +S+++
Sbjct: 546 FVGSKNVPTHGPQAASAIMGGAGGHADVARY----GFPRPDISQMI 587
>L39893-1|AAA62311.1| 735|Caenorhabditis elegans cleavage
stimulation factor protein.
Length = 735
Score = 29.1 bits (62), Expect = 8.0
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Query: 86 FKGYDKIPYLGPKAAITVAGAVGGWQEALNYVTENGYQRISVSRLL 131
F G +P GP+AA + G GG + Y G+ R +S+++
Sbjct: 551 FVGSKNVPTHGPQAASAIMGGAGGHADVARY----GFPRPDISQMI 592
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.316 0.135 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,609,542
Number of Sequences: 27539
Number of extensions: 531630
Number of successful extensions: 1307
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1283
Number of HSP's gapped (non-prelim): 18
length of query: 526
length of database: 12,573,161
effective HSP length: 85
effective length of query: 441
effective length of database: 10,232,346
effective search space: 4512464586
effective search space used: 4512464586
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 62 (29.1 bits)
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