Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002520-TA|BGIBMGA002520-PA|IPR003323|Ovarian tumour,
otubain, IPR001012|UBX, IPR007087|Zinc finger, C2H2-type
(309 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC24C9.14 |otu1|mug141|ubiquitin-specific protease |Schizosacc... 151 9e-38
SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces... 38 0.002
SPAC17C9.11c |||zinc finger protein, zf-C2H2 type/UBA domain pro... 31 0.16
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 31 0.21
SPAC15A10.10 |mde6||Muskelin homolog|Schizosaccharomyces pombe|c... 29 0.64
SPBC1348.08c |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 29 0.84
SPAC977.07c |||glycoprotein |Schizosaccharomyces pombe|chr 1|||M... 29 0.84
SPCC777.11 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||... 29 1.1
SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pomb... 28 1.5
SPAC3C7.02c |||protein kinase inhibitor |Schizosaccharomyces pom... 28 1.5
SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces pomb... 27 3.4
SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual 27 3.4
SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr 2|||M... 27 4.5
SPBC19F8.01c |spn7|SPBC21.08c|septin Spn7|Schizosaccharomyces po... 27 4.5
SPAC30D11.01c ||SPAC56F8.01|alpha-glucosidase|Schizosaccharomyce... 26 5.9
SPCC645.04 |nse3||Smc5-6 complex non-SMC subunit Nse3 |Schizosac... 26 7.8
SPAC22G7.04 |ubp13|pan2|poly|Schizosaccharomyces pombe|chr 1|||M... 26 7.8
SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces pomb... 26 7.8
>SPAC24C9.14 |otu1|mug141|ubiquitin-specific protease
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 329
Score = 151 bits (367), Expect = 9e-38
Identities = 100/335 (29%), Positives = 173/335 (51%), Gaps = 34/335 (10%)
Query: 1 MSALVFKIKSKNGQQVLKDLTSESTVGELKMFLSSISDISIERVNILCGYPPKALDTSDN 60
MS+L ++K +N Q ++ + + +TVG +++ + + + G+PP+ + ++
Sbjct: 1 MSSLRLRLKYEN-QSAVETVEANATVGSFLDLVAAKFSLPRNSIALKFGFPPQDIPLVNS 59
Query: 61 SKTLSELGLKTGETLIVEEKAVTKI-----------NATQTETRPSQNGVE-----SHET 104
LS L + +G+ ++V + A T NA T P Q + SH++
Sbjct: 60 DVPLSTL-VSSGQQILVLKNAATSFSTNEPAKPPIPNAATKPTFPPQTEISNPPAVSHQS 118
Query: 105 IESCRP--------GILMKKVVPSDNSCLFTSIGFVLNGSIDTSVHTLMRQIIAMEVASD 156
+ + G + +V+P DNSCLF + L+ + S + L R+I+A +V S+
Sbjct: 119 KNTSQDPPYVSTPIGDIALRVMPDDNSCLFRA----LSKPLGFSPYEL-REIVANQVLSN 173
Query: 157 RDTYNEAMLGKPNAEYCDWIQQPSSWGGAIEVAILSRFYGLEMAVVDTLNAIINRFGEDK 216
D Y+ A+LGKP+ EY WI++ +SWGG IE++ILS +G+E+ VD ++ +
Sbjct: 174 PDIYSTAILGKPSIEYASWIRKETSWGGYIELSILSSHFGVEICSVDVKTGRVDSYNPQP 233
Query: 217 NYGQRVFLLFDGVHYDPLYLEQS--DGGLQTI-FPAEDMEVYREAEQLAHEAKSSRQFTD 273
GQR ++++ G+HYD L D + + F A D+ + +QLA K+ +TD
Sbjct: 234 ATGQRTYIVYSGIHYDLAALAAVLWDTDVDVVLFDASDVTITPYVQQLASLLKNMHYYTD 293
Query: 274 LNKFTLKCMICDKFLTGQAEAQKHAKETMHTNFGE 308
F+++C IC L G+ +A HA T HT FGE
Sbjct: 294 TASFSIRCTICGTGLVGEKDATAHALATGHTQFGE 328
>SPAC1952.03 |||cysteine protease, OTU family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 324
Score = 37.9 bits (84), Expect = 0.002
Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 7/99 (7%)
Query: 118 VPSDNSCLFTSIGFVLNGSIDTSVHT-LMRQIIAMEVASDRDTYNEAMLGK------PNA 170
+P+D +CLF SI LN + +++ +R A V + + +L + P +
Sbjct: 190 IPADGNCLFASISHQLNYHHNVKLNSQALRNKSADYVLKHCEQFEGFLLDEESGEVLPVS 249
Query: 171 EYCDWIQQPSSWGGAIEVAILSRFYGLEMAVVDTLNAII 209
+YC+ I+ S WG IE+ L+ + + V +T ++
Sbjct: 250 DYCNEIRNNSKWGSDIEIQALANSLEVPVHVYNTEGPVL 288
>SPAC17C9.11c |||zinc finger protein, zf-C2H2 type/UBA domain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 240
Score = 31.5 bits (68), Expect = 0.16
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 279 LKCMICDKFLTGQAEAQKHAKETMHTNFGE 308
LKC+ CDK L+ A+ H+ +T H F E
Sbjct: 3 LKCLECDKLLSSIEMAEFHSTKTSHDQFEE 32
>SPAC26A3.16 |dph1|ucp5|UBA domain protein
Dph1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 354
Score = 31.1 bits (67), Expect = 0.21
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 1 MSALVFKIKSKNGQQVLKDLTSESTVGELKMFLSSISDISIERVNILCGYPPKALDTSDN 60
M+ + IK+ N Q+ + SES+V LK ++ ++DI ER ++ Y + L ++
Sbjct: 1 MTNISLTIKAANDQKYAVTVDSESSVLALKEAIAPVADIEKERQRLI--YAGRVLKDEES 58
Query: 61 SKT 63
KT
Sbjct: 59 LKT 61
>SPAC15A10.10 |mde6||Muskelin homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 716
Score = 29.5 bits (63), Expect = 0.64
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 91 ETRPSQNGVESHETIESCRPGILMKKVVPSDNSCLFTSIGF 131
ETR + V ++T +S P + ++ S N +FT GF
Sbjct: 475 ETREAVQHVRKNDTSQSPSPSFCQRSIMDSKNHRIFTMFGF 515
>SPBC1348.08c |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 416
Score = 29.1 bits (62), Expect = 0.84
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 186 IEVAILSRFYGLEMAVVD-TLNAIINRFGEDKNYGQRVFLLFDGVHYDPLYLEQSDGGLQ 244
I AI GLE AV D T+++ +N F KN VF + ++ L+QS
Sbjct: 184 IPTAICDGVRGLEYAVYDYTISSSMNEFCYPKNGQTDVFAFNEPAYFGSSDLDQSSPLFT 243
Query: 245 TIFPAED 251
+F + D
Sbjct: 244 GVFSSTD 250
>SPAC977.07c |||glycoprotein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 416
Score = 29.1 bits (62), Expect = 0.84
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 186 IEVAILSRFYGLEMAVVD-TLNAIINRFGEDKNYGQRVFLLFDGVHYDPLYLEQSDGGLQ 244
I AI GLE AV D T+++ +N F KN VF + ++ L+QS
Sbjct: 184 IPTAICDGVRGLEYAVYDYTISSSMNEFCYPKNGQTDVFAFNEPAYFGSSDLDQSSPLFT 243
Query: 245 TIFPAED 251
+F + D
Sbjct: 244 GVFSSTD 250
>SPCC777.11 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 128
Score = 28.7 bits (61), Expect = 1.1
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Query: 37 SDISIERVNILCGYPPKALDTSDNSKTLSELGLKTGETLIVEEKAVTKIN 86
S +S++R IL G PPK + ++ L +GL+ ++ E+ + K+N
Sbjct: 7 SKVSLKR--ILQGNPPKPIGLTEYGHLLRLVGLREADSKEENERTILKLN 54
>SPBC216.05 |rad3||ATR checkpoint kinase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 2386
Score = 28.3 bits (60), Expect = 1.5
Identities = 14/48 (29%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 9 KSKNGQQVLKDLTS-ESTVGELKMFLSSISDISIERVNILCGYPPKAL 55
+ +N ++D TS ES++ +++ FLS ++ V++ CG+ +AL
Sbjct: 1354 RKENRYMSVEDATSRESSISKVESFLSRFPSKTLGIVSLNCGFHARAL 1401
>SPAC3C7.02c |||protein kinase inhibitor |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 383
Score = 28.3 bits (60), Expect = 1.5
Identities = 15/45 (33%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 17 LKDLTSESTVGELKMFLSSISDISIERVNILCGYPPKALDTSDNS 61
L ++T E+ + + ++ + S E+V ILCGY K LD D++
Sbjct: 186 LTNITRENFKRAFTLHIGTLLEHS-EKVAILCGYAKKILDLLDDT 229
>SPBC27B12.08 |||AP-1 accessory protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1919
Score = 27.1 bits (57), Expect = 3.4
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 33 LSSISDISIER-VNILCGYPPKALDTSDNSKTLSELGLKTGETLIVEEKAVT 83
L+S+ D +I+ ++ C PPK ++++ S LK+G I+ KAVT
Sbjct: 781 LTSLIDNAIQLFASMFCHQPPKVMESTLEIMVASVTNLKSGRD-ILRYKAVT 831
>SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1828
Score = 27.1 bits (57), Expect = 3.4
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 197 LEMAVVDTLNAIINRFGEDKNYGQRVFLLFDGVHYDP 233
L M + D LNA N + ++N V +L VH P
Sbjct: 1571 LSMDLQDALNAYFNNYVSEENRSHTVLVLDKSVHQFP 1607
>SPBC337.08c |ubi4||ubiquitin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 382
Score = 26.6 bits (56), Expect = 4.5
Identities = 24/120 (20%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Query: 8 IKSKNGQQVLKDLTSESTVGELKMFLSSISDISIERVNILCGYPPKALDTSDNSKTLSEL 67
+K+ G+ + ++ S T+ +K + I ++ ++ + K L+ + +TLS+
Sbjct: 5 VKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI--FAGKQLE---DGRTLSDY 59
Query: 68 GLKTGETL--IVEEKAVTKINATQTETRPSQNGVESHETIESCRPGILMKKVVPSDNSCL 125
++ TL ++ + +I + VES +TI++ + I K+ +P D L
Sbjct: 60 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 119
Score = 26.6 bits (56), Expect = 4.5
Identities = 24/120 (20%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Query: 8 IKSKNGQQVLKDLTSESTVGELKMFLSSISDISIERVNILCGYPPKALDTSDNSKTLSEL 67
+K+ G+ + ++ S T+ +K + I ++ ++ + K L+ + +TLS+
Sbjct: 81 VKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI--FAGKQLE---DGRTLSDY 135
Query: 68 GLKTGETL--IVEEKAVTKINATQTETRPSQNGVESHETIESCRPGILMKKVVPSDNSCL 125
++ TL ++ + +I + VES +TI++ + I K+ +P D L
Sbjct: 136 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 195
Score = 26.6 bits (56), Expect = 4.5
Identities = 24/120 (20%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Query: 8 IKSKNGQQVLKDLTSESTVGELKMFLSSISDISIERVNILCGYPPKALDTSDNSKTLSEL 67
+K+ G+ + ++ S T+ +K + I ++ ++ + K L+ + +TLS+
Sbjct: 157 VKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI--FAGKQLE---DGRTLSDY 211
Query: 68 GLKTGETL--IVEEKAVTKINATQTETRPSQNGVESHETIESCRPGILMKKVVPSDNSCL 125
++ TL ++ + +I + VES +TI++ + I K+ +P D L
Sbjct: 212 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 271
Score = 26.6 bits (56), Expect = 4.5
Identities = 24/120 (20%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Query: 8 IKSKNGQQVLKDLTSESTVGELKMFLSSISDISIERVNILCGYPPKALDTSDNSKTLSEL 67
+K+ G+ + ++ S T+ +K + I ++ ++ + K L+ + +TLS+
Sbjct: 233 VKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI--FAGKQLE---DGRTLSDY 287
Query: 68 GLKTGETL--IVEEKAVTKINATQTETRPSQNGVESHETIESCRPGILMKKVVPSDNSCL 125
++ TL ++ + +I + VES +TI++ + I K+ +P D L
Sbjct: 288 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRL 347
>SPBC19F8.01c |spn7|SPBC21.08c|septin Spn7|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 26.6 bits (56), Expect = 4.5
Identities = 23/103 (22%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 58 SDNSKTLSELGLKTGETLIVEEKAVTKINATQTETRPSQNGVESHETIESCRPGILMKKV 117
S++S + + L L+ +++ E + + +TETR S + E + +KK+
Sbjct: 289 SNDSPSNTSLSLQKQNSIVANEDKRSVNGSERTETRSSIDQSEMRTNVSDSTKSEELKKI 348
Query: 118 --VPSDNSCLFTSIGFVLNGSIDTSVHTLMRQIIAMEVASDRD 158
+ DN+ +S+ G+ T + L + I +EV S ++
Sbjct: 349 NSIKVDNT---SSLKCDSYGNTKTKTNQLNCEQIGLEVISPKE 388
>SPAC30D11.01c ||SPAC56F8.01|alpha-glucosidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 993
Score = 26.2 bits (55), Expect = 5.9
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 50 YPPKALDTSDNSKTLSELGLKTGETL 75
YPP ALDT + L++ G+ T+
Sbjct: 592 YPPYALDTDTETHDLAQFGVSPNATM 617
>SPCC645.04 |nse3||Smc5-6 complex non-SMC subunit Nse3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 328
Score = 25.8 bits (54), Expect = 7.8
Identities = 13/25 (52%), Positives = 15/25 (60%)
Query: 147 QIIAMEVASDRDTYNEAMLGKPNAE 171
QIIA E ASD D Y E + G N +
Sbjct: 28 QIIADEEASDLDEYEEDLEGSGNED 52
>SPAC22G7.04 |ubp13|pan2|poly|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1115
Score = 25.8 bits (54), Expect = 7.8
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 10 SKNGQQVLKDLTSESTVGELKMFLSSISDISIE-RVNILCGY 50
S NG+ +L+D S V ++ +ISDI + + CGY
Sbjct: 184 STNGEIILRDPNSFQPVNKVVAHTGTISDIDTSGNLLLSCGY 225
>SPBC2D10.12 |rhp23||Rad23 homolog Rhp23|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 368
Score = 25.8 bits (54), Expect = 7.8
Identities = 20/91 (21%), Positives = 46/91 (50%), Gaps = 9/91 (9%)
Query: 11 KNGQQ---VLKDLTSESTVGELKMFLSSISDISIERVNILCGYPPKALDTSDNSKTLSEL 67
KN QQ V+ D+++++ + ELK + + + +ER ++ Y + L + KT+ E
Sbjct: 6 KNLQQQKFVISDVSADTKISELKEKIQTQQNYEVERQKLI--YSGRIL---ADDKTVGEY 60
Query: 68 GLKTGETLI-VEEKAVTKINATQTETRPSQN 97
+K + ++ + + T + ++ P+ N
Sbjct: 61 NIKEQDFIVCMVSRPKTSTSTPKSAASPAPN 91
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.132 0.373
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,335,805
Number of Sequences: 5004
Number of extensions: 52712
Number of successful extensions: 173
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 156
Number of HSP's gapped (non-prelim): 23
length of query: 309
length of database: 2,362,478
effective HSP length: 73
effective length of query: 236
effective length of database: 1,997,186
effective search space: 471335896
effective search space used: 471335896
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 54 (25.8 bits)
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