GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002519-TA|BGIBMGA002519-PA|IPR000152|Aspartic acid and
asparagine hydroxylation site, IPR000859|CUB, IPR013032|EGF-like
region, IPR000742|EGF-like, type 3, IPR001881|EGF-like
calcium-binding, IPR006210|EGF, IPR013091|EGF calcium-binding
         (642 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    29   0.12 
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    29   0.12 
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   5.8  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   5.8  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   7.7  

>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 29.1 bits (62), Expect = 0.12
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 6/44 (13%)

Query: 165 DECASIDHGCSHSC-----VNTLGGY-ECACDIGYELHSDGKKC 202
           ++C +++  CSH C     +N+      CAC  G +L SDG  C
Sbjct: 34  NQCQAVNGHCSHLCLPAPRINSKSPLLSCACPDGLKLLSDGLMC 77


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 29.1 bits (62), Expect = 0.12
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 6/44 (13%)

Query: 165 DECASIDHGCSHSC-----VNTLGGY-ECACDIGYELHSDGKKC 202
           ++C +++  CSH C     +N+      CAC  G +L SDG  C
Sbjct: 34  NQCQAVNGHCSHLCLPAPRINSKSPLLSCACPDGLKLLSDGLMC 77


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 12/28 (42%), Positives = 14/28 (50%), Gaps = 1/28 (3%)

Query: 175 SHSCVNTLGGYECACDIGY-ELHSDGKK 201
           +HS  +  G  EC CD GY     D KK
Sbjct: 284 AHSKSSDYGFTECRCDPGYFRAEKDPKK 311


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 23.4 bits (48), Expect = 5.8
 Identities = 11/29 (37%), Positives = 15/29 (51%)

Query: 268 VTVHSKLGADVLRRHGAFCGTALPPPVTS 296
           V    +  AD+ RR+GA     LPP V +
Sbjct: 739 VVAQRERAADMKRRNGALIYNILPPHVAA 767


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.0 bits (47), Expect = 7.7
 Identities = 13/51 (25%), Positives = 19/51 (37%)

Query: 454 QNQMYMVFKSDGSVQRKGFLATHSTACGGYLSATEEVKHLYSHARYGDNAY 504
           Q Q+++         + GF   H   C  YL    + + LY   R   N Y
Sbjct: 909 QGQIHLTVAVVQYKTQDGFGPIHYGVCSNYLREISDGEPLYVFVRSAPNFY 959


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.321    0.138    0.445 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,952
Number of Sequences: 429
Number of extensions: 8708
Number of successful extensions: 24
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 15
Number of HSP's gapped (non-prelim): 8
length of query: 642
length of database: 140,377
effective HSP length: 62
effective length of query: 580
effective length of database: 113,779
effective search space: 65991820
effective search space used: 65991820
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 47 (23.0 bits)