GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002518-TA|BGIBMGA002518-PA|IPR000859|CUB,
IPR006025|Peptidase M, neutral zinc metallopeptidases, zinc-binding
site, IPR006026|Peptidase, metallopeptidases, IPR001506|Peptidase
M12A, astacin
         (647 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory pro...    23   8.6  

>DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory
           protein 8 protein.
          Length = 99

 Score = 22.6 bits (46), Expect = 8.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)

Query: 452 CSFVGKRGAGAQAISIGKNCDK 473
           C  +G +  GA    IGKNC++
Sbjct: 45  CDALGNQIKGALPEIIGKNCER 66


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.314    0.132    0.388 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,965
Number of Sequences: 317
Number of extensions: 6532
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7
Number of HSP's gapped (non-prelim): 1
length of query: 647
length of database: 114,650
effective HSP length: 61
effective length of query: 586
effective length of database: 95,313
effective search space: 55853418
effective search space used: 55853418
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 46 (22.6 bits)