Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002518-TA|BGIBMGA002518-PA|IPR000859|CUB,
IPR006025|Peptidase M, neutral zinc metallopeptidases, zinc-binding
site, IPR006026|Peptidase, metallopeptidases, IPR001506|Peptidase
M12A, astacin
(647 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_1065 + 30061588-30061883,30061995-30062056,30062196-300622... 37 0.057
03_02_0762 - 10968888-10969466,10972522-10974175,10974277-109743... 34 0.31
01_01_0946 - 7442907-7443284,7443797-7445122 34 0.40
02_04_0622 - 24508508-24508666,24509533-24509634,24510108-245101... 33 0.93
11_06_0021 + 19314211-19314311,19315202-19315307,19317135-193174... 32 1.6
09_04_0634 - 19132916-19134033,19134716-19135915,19136002-191361... 32 1.6
08_02_0511 + 18002930-18003104,18003137-18003180,18003194-18003793 31 2.2
05_05_0360 - 24395993-24397540,24397626-24397730,24398731-24399111 31 2.9
04_03_0640 + 18257612-18257787,18257831-18257906,18259105-18260556 31 2.9
10_08_0596 + 19078153-19078440,19078802-19079068 29 8.7
03_01_0300 + 2350232-2352274,2352349-2352669,2352752-2352838,235... 29 8.7
>03_05_1065 + 30061588-30061883,30061995-30062056,30062196-30062276,
30062391-30062464,30062547-30062629,30063044-30063147,
30063526-30063665,30063736-30063783,30063939-30063991,
30064178-30064262,30064346-30064412,30064496-30064606,
30065262-30065283,30066244-30071110,30071186-30071374,
30071463-30071577,30072329-30073388,30074247-30074694,
30074966-30075019,30075105-30076898,30076989-30077949,
30078271-30078384,30078459-30078613,30078934-30079026,
30079341-30079613,30093423-30093975,30094465-30094540,
30094619-30094718
Length = 4025
Score = 36.7 bits (81), Expect = 0.057
Identities = 39/124 (31%), Positives = 64/124 (51%), Gaps = 14/124 (11%)
Query: 140 SESESLEQDGVLVVNISTDNILNLDELYPFIQISNASRKQDEKTNKIQSNSREITG-DSN 198
SES+S + + N++ N+ ++DE+ I +S + ++E TN ++I G + +
Sbjct: 3897 SESDSSSNKQLFINNVTLTNVNSVDEVE--ISLSKERKSENENTN---LPFKQIRGQECD 3951
Query: 199 NIQFKDIPENVTMAPAPTNGF-LSNSDQDDEK----EINKTERELKV-KNID-LLKPTES 251
N K P++VT N F LS Q + K +I+ T R LKV + +D LLK S
Sbjct: 3952 NSDPKSYPDSVTRLTRGKNPFALSILKQVEHKLHGWDIDGT-RSLKVSEQVDHLLKQATS 4010
Query: 252 LQNL 255
+ NL
Sbjct: 4011 IDNL 4014
>03_02_0762 - 10968888-10969466,10972522-10974175,10974277-10974359,
10974435-10974533,10974620-10974706,10974782-10974838,
10974939-10975065,10975344-10975465,10975685-10975732,
10975867-10976268
Length = 1085
Score = 34.3 bits (75), Expect = 0.31
Identities = 36/164 (21%), Positives = 70/164 (42%), Gaps = 3/164 (1%)
Query: 68 RKRTKQPVQLSQDKKGYNDAALMSES-LPEGVDKSLVLKNGKLLPEEILDN-STEFNETK 125
RK +Q +++ + + ++ L ++S L K++ K K I N ++E +E +
Sbjct: 892 RKFKRQGIEIRRVVESDSEGCLPADSDLHGSKHKNIHQKVRKPRAFRISRNQASEKSEQQ 951
Query: 126 SDVHIANRSSVENISESESLEQDGVLVVNISTDNILNLDELYPFIQISNASR-KQDEKTN 184
H++N E I E E +EQD + S N L I+ S+A + T+
Sbjct: 952 KQQHVSNNQEYEEIEEGELIEQDHQDTASRSKSNHQRKVVLKSVIEASSACQGGVINATS 1011
Query: 185 KIQSNSREITGDSNNIQFKDIPENVTMAPAPTNGFLSNSDQDDE 228
K S TG+ +N ++ + + ++ ++DE
Sbjct: 1012 KDADCSNGATGECDNKHILEVMKKMQKRSERFKASIATQKEEDE 1055
>01_01_0946 - 7442907-7443284,7443797-7445122
Length = 567
Score = 33.9 bits (74), Expect = 0.40
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 95 PEGVDKSLVLKNGKLLPEEILDNSTEFNETKSDVHIANRSSVENISESESLEQDGVLVVN 154
P G+ +S+ L NG+ L E L ++ T +AN+S EN + +E E L ++
Sbjct: 150 PNGIGESMTLVNGEKLDESTLISTICETNTSDTDFLANKS--ENFNGNEIEESFEQLSIS 207
Query: 155 ISTDNILNLD---ELYPFIQ 171
N L D E YP I+
Sbjct: 208 SDIGNNLQFDDAKEKYPLIE 227
>02_04_0622 -
24508508-24508666,24509533-24509634,24510108-24510176,
24510294-24510362,24510428-24510502,24510584-24510688,
24511309-24511407,24511521-24513230,24513489-24513788,
24514748-24514846,24514962-24515079,24515166-24515251,
24515334-24515402,24515746-24515843,24516373-24516534,
24516779-24516787,24516970-24516991,24517620-24517712,
24517872-24517940,24518720-24518782,24518882-24519037,
24520895-24521230
Length = 1355
Score = 32.7 bits (71), Expect = 0.93
Identities = 29/98 (29%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 516 NKLTVEEVNSL--GQTYDYDSIMHYARNTVSKGSFL-DTILPLEVHGKKRPEIGQRIKLS 572
+K V + SL G + DS + NT + GS L DT+ P V K+R LS
Sbjct: 547 SKQKVSAIESLLKGNSILLDSSLPSINNTRNGGSRLVDTVNP-HVANKERSRSPYLSSLS 605
Query: 573 ASDIAQTNLLYKCAKCGRTLLGNSGWFNSPGWGTEPAP 610
+ I+ ++L Y + GR+ G++ ++ W T P
Sbjct: 606 SESISGSSLPYARSSSGRSPYGSTMEESNDTWSTRRMP 643
>11_06_0021 +
19314211-19314311,19315202-19315307,19317135-19317412,
19318587-19318692,19318812-19319159,19319237-19319313,
19319392-19319516,19319884-19320135,19320314-19320336
Length = 471
Score = 31.9 bits (69), Expect = 1.6
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 173 SNASRKQDEKTNKIQSNSREITG-DSNNIQFKDIPENVT-MAPAPTNGFLSNSDQDDEKE 230
+N S K+ + K + ++E+ G D +NI + + P PT +++SD+DDE++
Sbjct: 375 TNPSEKEIKAVKKRKERAKELEGIDMSNIITSSRRRSTSNFIPLPTPKIVADSDEDDEED 434
Query: 231 I-NKTERELKVKNID 244
+ + E+ V+ D
Sbjct: 435 AEDDNDEEVNVEGGD 449
>09_04_0634 -
19132916-19134033,19134716-19135915,19136002-19136106,
19136273-19136315,19137622-19137740,19138074-19138172,
19138264-19138480
Length = 966
Score = 31.9 bits (69), Expect = 1.6
Identities = 30/114 (26%), Positives = 46/114 (40%), Gaps = 5/114 (4%)
Query: 135 SVENISESESLEQDGVLVVN--ISTDNILNLDELYPFIQISNASRKQD--EKTNKIQSNS 190
S +N+ E + E V +N + DN+ NA + D EK + S
Sbjct: 697 SEDNVEEKKETEGTSVKEMNSILKADNVEEEKLTDDTSAERNAMQHIDDAEKKQAADTVS 756
Query: 191 REITGDSNNIQFKDIPENVTMAPAPTNGFLSNSDQDDEKEINKTERELKVKNID 244
RE T NI+ ++ E P G L N+D +++ E + E K N D
Sbjct: 757 RE-TSALQNIEERENVEGTGAKGVPAVGSLENADAENQTEDTSAKTECKSDNAD 809
>08_02_0511 + 18002930-18003104,18003137-18003180,18003194-18003793
Length = 272
Score = 31.5 bits (68), Expect = 2.2
Identities = 17/63 (26%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 190 SREITGDSNNIQFKDIPENVTMAPAPTNGFLSNSDQDDEKEI-NKTERELKVKNIDLLKP 248
S E +GD +++ ENV A + +S S +D+++EI + E + V +++ L+P
Sbjct: 18 SEESSGDEYTQSDEEVEENVEGASEASGDDVSGSGEDEDEEICCEHEESIVVYHLEFLRP 77
Query: 249 TES 251
++
Sbjct: 78 RDT 80
>05_05_0360 - 24395993-24397540,24397626-24397730,24398731-24399111
Length = 677
Score = 31.1 bits (67), Expect = 2.9
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 8/84 (9%)
Query: 303 KKFFRHHKRHSGSKE-YRSSERKLE-VPEHEFED--KFEVKPPPKNLTEFDPFKDMVFRD 358
+ F H+ + +KE R ER E + +F D +F KPPP + F F+++ RD
Sbjct: 389 ESFLSFHQGNGVNKEALRDGERLREAICSMKFHDIKEFSYKPPPPSEDIFAVFEELRERD 448
Query: 359 TEEDLMMAESNQYNSTGPKKRHRT 382
D E Q N G KRH T
Sbjct: 449 ---DANEKEIGQCNG-GTPKRHAT 468
>04_03_0640 + 18257612-18257787,18257831-18257906,18259105-18260556
Length = 567
Score = 31.1 bits (67), Expect = 2.9
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Query: 488 WHEHTRPDRDNHVQIIRDNIM----LGQEYNFN--KLTVEEVNSLGQTYDYDSIMHYARN 541
WH H R H++ I+D + L EYN+ K+ VE +LGQ + + ++ + +
Sbjct: 196 WHSH-RETEARHLRQIKDAVYDAEDLLDEYNYYALKVKVEASKNLGQDHSHGPVLEFLDS 254
Query: 542 TVSKGSF 548
G+F
Sbjct: 255 VNFNGNF 261
>10_08_0596 + 19078153-19078440,19078802-19079068
Length = 184
Score = 29.5 bits (63), Expect = 8.7
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Query: 600 NSPGWGTEPAPTTPERCEWRIVATHGERVVLNITGNEITTASLRLAKS 647
+S G TE AP P +C WR H + V ++ + L LA+S
Sbjct: 21 DSGGRSTEAAPAAPAKCCWR---RHEDEVAALAACQQLPSLKLALARS 65
>03_01_0300 +
2350232-2352274,2352349-2352669,2352752-2352838,
2353031-2353708,2353800-2353964,2354139-2354433,
2354581-2354795,2354885-2355190,2355269-2355332,
2355426-2355665,2355783-2355886
Length = 1505
Score = 29.5 bits (63), Expect = 8.7
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 11/81 (13%)
Query: 92 ESLPEGVDKSLVLKNGKLLP----EEILDNSTEFNETKSDVHIANRSSVENISESESLEQ 147
E LP D LVLK+G + +++L T+FN + A++ ++E + SE ++
Sbjct: 808 EFLP-AADLILVLKDGHITQAGKYDDLLQAGTDFNA----LVCAHKEAIETMEFSEDSDE 862
Query: 148 DGVLVVNIS--TDNILNLDEL 166
D V V I T ++ N+D L
Sbjct: 863 DTVSSVPIKRLTPSVSNIDNL 883
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.314 0.132 0.388
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,342,187
Number of Sequences: 37544
Number of extensions: 766570
Number of successful extensions: 1515
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1514
Number of HSP's gapped (non-prelim): 12
length of query: 647
length of database: 14,793,348
effective HSP length: 87
effective length of query: 560
effective length of database: 11,527,020
effective search space: 6455131200
effective search space used: 6455131200
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
S2: 63 (29.5 bits)
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