Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA002517-TA|BGIBMGA002517-PA|undefined
(112 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 29 0.13
SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein Ucp7|Schizosaccha... 29 0.13
SPBC1706.01 |tea4|wsh3|tip elongation aberrant protein Tea4|Schi... 28 0.31
SPAC6B12.11 |drc1|sld1|DNA replication protein Drc1|Schizosaccha... 28 0.40
SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Sch... 27 0.53
SPCPB1C11.03 |||cysteine transporter |Schizosaccharomyces pombe|... 27 0.70
SPAC26A3.11 |||amidohydrolase|Schizosaccharomyces pombe|chr 1|||... 26 1.2
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 26 1.6
SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit Rpt2|Schi... 26 1.6
SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyce... 25 2.2
SPCC553.09c |spb70|pol12|DNA polymerase alpha B-subunit|Schizosa... 25 2.2
SPBC418.02 |||NatA N-acetyltransferase complex subunit |Schizosa... 25 2.8
SPCC4G3.05c |mus81||Holliday junction resolvase subunit Mus81|Sc... 25 3.8
SPBC12D12.01 |sad1|SPBC16H5.01c|spindle pole body protein Sad1|S... 24 5.0
SPAC222.07c |hri2||eIF2 alpha kinase Hri2|Schizosaccharomyces po... 24 5.0
SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces po... 24 6.6
SPBC16D10.01c ||SPBC418.03c|conserved fungal protein|Schizosacch... 24 6.6
SPAC926.02 |||conserved fungal protein|Schizosaccharomyces pombe... 24 6.6
SPBC1778.02 |rap1||telomere binding protein Rap1|Schizosaccharom... 24 6.6
SPBC106.09 |cut4|apc1|anaphase-promoting complex subunit Apc1|Sc... 23 8.7
SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr... 23 8.7
SPCC1682.13 |||SWIRM domain protein|Schizosaccharomyces pombe|ch... 23 8.7
SPCC126.02c |pku70||Ku domain protein Pku70|Schizosaccharomyces ... 23 8.7
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 29.5 bits (63), Expect = 0.13
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 4/46 (8%)
Query: 55 EKYEGSVLEAKQERKSAAQNGV----TILPEIRNLPCNKRYFDLKQ 96
+K E + K+ R S +N + T P ++N+P K FDL+Q
Sbjct: 1361 KKREAEIHRLKEHRPSGKENNIPAVKTTEPVLKNIPQRKTIFDLQQ 1406
>SPAC17A5.12 |ucp7||UBA/TPR/DNAJ domain protein
Ucp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 697
Score = 29.5 bits (63), Expect = 0.13
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 19 NDDSDTTHFSKPNCGEEYLEDVENGENLNKDFAFQKEKYEG--SVLEAKQERKSAAQ 73
++D TT+ S+ E L D ++ N F F + YEG ++LE E +A Q
Sbjct: 329 SEDRITTNQSRSGNDESSLVDFLTSKSDNSSFNFPSDTYEGTENILETAYESTTARQ 385
>SPBC1706.01 |tea4|wsh3|tip elongation aberrant protein
Tea4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 28.3 bits (60), Expect = 0.31
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 13 SFEIEYNDDSDTTHFSKP--NCGEEYLEDVENGENLNKD-FAFQKEKYEGSVLEAK 65
S EI + + DTT S +CG EY E VE+ E ++D F E+ E ++ EA+
Sbjct: 51 SQEISDSQEEDTTLTSSQFEDCGTEYNEVVEDDEFRSEDEDDFMDEEEEYALYEAE 106
>SPAC6B12.11 |drc1|sld1|DNA replication protein
Drc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 337
Score = 27.9 bits (59), Expect = 0.40
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 38 EDVENGENLNKDFAFQKEKYEGSVLEAKQERKSAAQNGVTI 78
ED ENG + N+D K+ L+++++ K +NG+ I
Sbjct: 274 EDAENGIDDNEDTTASKDSSPFLDLQSERQNKKIMRNGLVI 314
>SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein
Zds1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 938
Score = 27.5 bits (58), Expect = 0.53
Identities = 17/68 (25%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 6 SSIISTKSFEI--EYNDDSDTTHFSKPNCGEEYLEDVENGENLNKDFAFQKEKYEG-SVL 62
++++S ++ I E N+++DTT ++ + G E +D ++ + E ++G S
Sbjct: 76 ANLLSDQNITISNENNNENDTTEEAETSSGNEAADDEDSSSDAQSSVPSFSEIHDGMSEE 135
Query: 63 EAKQERKS 70
E +ERK+
Sbjct: 136 ELDKERKT 143
>SPCPB1C11.03 |||cysteine transporter |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 570
Score = 27.1 bits (57), Expect = 0.70
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
Query: 11 TKSFEIEYNDDSDTTHFSKPNCGEEYLEDVE-------NGENLNKDFAFQKEKYEGSVLE 63
+ S ++E +++ T +KP +E + DVE N +++ FAF ++ + L
Sbjct: 28 SSSLDLEKKENAVDTTIAKPFDSDEDIADVEKAGGKKINNSLIDETFAFMQDAKKLDPLT 87
Query: 64 AKQERK 69
KQE K
Sbjct: 88 PKQESK 93
>SPAC26A3.11 |||amidohydrolase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 322
Score = 26.2 bits (55), Expect = 1.2
Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 54 KEKYEGSVLEAKQERKSAAQNG--VTILPEIRNLPCNKRYFD 93
K+K E L A+ + AA+NG V +LPEI N P YF+
Sbjct: 55 KDKSENLQL-ARLKVLEAAKNGSNVIVLPEIFNSPYGTGYFN 95
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 25.8 bits (54), Expect = 1.6
Identities = 13/35 (37%), Positives = 17/35 (48%)
Query: 39 DVENGENLNKDFAFQKEKYEGSVLEAKQERKSAAQ 73
DV+N N ++ EKY+ E KQ RK Q
Sbjct: 460 DVDNNANSSEKDETTIEKYKRKAAERKQRRKELRQ 494
>SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit
Rpt2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 448
Score = 25.8 bits (54), Expect = 1.6
Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 39 DVENGENLNKDFAFQKEKYEGSVLEAKQERKSAAQNG 75
D NG+N KD K KYE V RK AQ+G
Sbjct: 14 DGANGDN-KKDQKKDKPKYEPPVPTRTGRRKKKAQSG 49
>SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1131
Score = 25.4 bits (53), Expect = 2.2
Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Query: 65 KQERKSAAQN---GVTILPEIRNLPCNKRYFDLK 95
+Q RKS +N + + +++ LP N RY DLK
Sbjct: 381 QQSRKSLDENKPNSFSNVSKLKRLPWNMRYLDLK 414
>SPCC553.09c |spb70|pol12|DNA polymerase alpha
B-subunit|Schizosaccharomyces pombe|chr 3|||Manual
Length = 574
Score = 25.4 bits (53), Expect = 2.2
Identities = 15/48 (31%), Positives = 22/48 (45%)
Query: 39 DVENGENLNKDFAFQKEKYEGSVLEAKQERKSAAQNGVTILPEIRNLP 86
D++ + KD FQ E+ + L+ ERKS Q + I LP
Sbjct: 46 DLDTFKAFAKDMKFQMERQVKATLKQNPERKSIKQIPGMNIDSILGLP 93
>SPBC418.02 |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 25.0 bits (52), Expect = 2.8
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 42 NGENLNKDFAFQKEKYEGSV 61
N E++ DFAF+++ YE S+
Sbjct: 218 NFEHIKADFAFRQKNYEESI 237
>SPCC4G3.05c |mus81||Holliday junction resolvase subunit
Mus81|Schizosaccharomyces pombe|chr 3|||Manual
Length = 608
Score = 24.6 bits (51), Expect = 3.8
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 39 DVENGENLNKDFAFQKEKYEGSVLEAKQER 68
D+E+G+ + DF ++++Y+ V K R
Sbjct: 376 DMESGQEVVLDFVVERKRYDDLVASIKDGR 405
>SPBC12D12.01 |sad1|SPBC16H5.01c|spindle pole body protein
Sad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 514
Score = 24.2 bits (50), Expect = 5.0
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Query: 44 ENLNKDFAFQKEKYEGSVLEAKQERKSAAQNGVTILPEIRNLPCNKRYFDLKQF-ENLFR 102
E+ D F E+YE S+ E + + T P N+R QF + F+
Sbjct: 110 ESDGDDEEFVNEEYENSIDEESDDEGYSLNEDTTATNASFRYPMNQRSTRKSQFYSSKFK 169
Query: 103 ILIFF 107
L++F
Sbjct: 170 PLLWF 174
>SPAC222.07c |hri2||eIF2 alpha kinase Hri2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 639
Score = 24.2 bits (50), Expect = 5.0
Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 16 IEYNDDSDTTHFSKPNCGEEYLEDVENGENLNKDFAFQKEKY 57
I YND +D + P G+ L VEN +N +F + +
Sbjct: 439 ISYNDKNDLKEYITPKIGDFGLV-VENKKNTETALSFLERNH 479
>SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2812
Score = 23.8 bits (49), Expect = 6.6
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 76 VTILPEIRNLPCNKRYFDLKQFENLFRI 103
V+ +PEI NL RY +K+ +L ++
Sbjct: 2345 VSNVPEIENLDAGSRYRAVKKILDLLKV 2372
>SPBC16D10.01c ||SPBC418.03c|conserved fungal
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 336
Score = 23.8 bits (49), Expect = 6.6
Identities = 12/47 (25%), Positives = 21/47 (44%)
Query: 36 YLEDVENGENLNKDFAFQKEKYEGSVLEAKQERKSAAQNGVTILPEI 82
+ E V +NL D ++K + + + + Q GVTIL +
Sbjct: 62 FKEAVSRSKNLTNDQGYEKYLWLAQINDNGSKALKLYQKGVTILERL 108
>SPAC926.02 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 443
Score = 23.8 bits (49), Expect = 6.6
Identities = 10/35 (28%), Positives = 20/35 (57%)
Query: 71 AAQNGVTILPEIRNLPCNKRYFDLKQFENLFRILI 105
A + T++ EI +L C+ + + FE L +I++
Sbjct: 195 ADKEASTLVTEIASLACSCKLLEESDFEKLCQIML 229
>SPBC1778.02 |rap1||telomere binding protein
Rap1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 693
Score = 23.8 bits (49), Expect = 6.6
Identities = 10/20 (50%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
Query: 8 IISTKSFEIEYN-DDSDTTH 26
++ T+SFE+E N DD + TH
Sbjct: 97 LLPTESFEVELNQDDVNRTH 116
>SPBC106.09 |cut4|apc1|anaphase-promoting complex subunit
Apc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1458
Score = 23.4 bits (48), Expect = 8.7
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 25 THFSKPNCGEEYLEDVENGENLNKDFAFQKE 55
T FS+ E +ED +L+ F F+KE
Sbjct: 414 TFFSRDKVHVEPIEDCNEAYSLSSKFHFKKE 444
>SPBC215.07c |||PWWP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 568
Score = 23.4 bits (48), Expect = 8.7
Identities = 15/66 (22%), Positives = 29/66 (43%)
Query: 9 ISTKSFEIEYNDDSDTTHFSKPNCGEEYLEDVENGENLNKDFAFQKEKYEGSVLEAKQER 68
+S S E E +++ S+P+ EE D + K + ++ S+ Q+R
Sbjct: 221 LSVPSSESEVSEEESDQEMSEPSPIEEDYNDTKARRITRKGTKKKTVTFDPSLESVPQKR 280
Query: 69 KSAAQN 74
+A+ N
Sbjct: 281 LNASSN 286
>SPCC1682.13 |||SWIRM domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 272
Score = 23.4 bits (48), Expect = 8.7
Identities = 12/27 (44%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Query: 60 SVLEAKQERKSAAQNGVTILPEIRNLP 86
S +EA++ RKSA NG+ ++ NLP
Sbjct: 134 STIEARR-RKSARGNGLNGAIDVANLP 159
>SPCC126.02c |pku70||Ku domain protein Pku70|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 607
Score = 23.4 bits (48), Expect = 8.7
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 38 EDVENGENLNKDFAFQKEKYE 58
E +++ ++ KDF F KEK++
Sbjct: 94 ERIKSLQSFEKDFQFSKEKFK 114
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.133 0.381
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 575,051
Number of Sequences: 5004
Number of extensions: 24087
Number of successful extensions: 99
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 84
Number of HSP's gapped (non-prelim): 23
length of query: 112
length of database: 2,362,478
effective HSP length: 64
effective length of query: 48
effective length of database: 2,042,222
effective search space: 98026656
effective search space used: 98026656
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 48 (23.4 bits)
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