GeneModel BLAST Result against bee

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA002517-TA|BGIBMGA002517-PA|undefined
         (112 letters)

Database: bee 
           429 sequences; 140,377 total letters

Searching.....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   3.5  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   4.6  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   4.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   4.6  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    20   8.0  

>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 3.5
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query: 81  EIRNLPCNKRYFDLKQFENLFRILI 105
           E+R+LP + + F ++    L R LI
Sbjct: 96  ELRDLPISGKPFQIRMKHGLIRDLI 120


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 20.6 bits (41), Expect = 4.6
 Identities = 9/32 (28%), Positives = 16/32 (50%)

Query: 55  EKYEGSVLEAKQERKSAAQNGVTILPEIRNLP 86
           + YEG     K  + +AA+  +  + + RN P
Sbjct: 73  QTYEGKGRTKKMAKHAAAELALRNIVQFRNTP 104


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 20.6 bits (41), Expect = 4.6
 Identities = 6/13 (46%), Positives = 8/13 (61%)

Query: 23  DTTHFSKPNCGEE 35
           D   + KP+C EE
Sbjct: 587 DVVRYGKPHCAEE 599


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 20.6 bits (41), Expect = 4.6
 Identities = 6/13 (46%), Positives = 8/13 (61%)

Query: 23  DTTHFSKPNCGEE 35
           D   + KP+C EE
Sbjct: 625 DVVRYGKPHCAEE 637


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
          receptor 1 protein.
          Length = 953

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 8/33 (24%), Positives = 17/33 (51%)

Query: 31 NCGEEYLEDVENGENLNKDFAFQKEKYEGSVLE 63
          N  ++Y E   N  N N ++  +   Y+ +++E
Sbjct: 43 NKSKKYFEQTLNELNFNLNYVNKGVTYKHTIIE 75


  Database: bee
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 140,377
  Number of sequences in database:  429
  
Lambda     K      H
   0.315    0.133    0.381 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,502
Number of Sequences: 429
Number of extensions: 1249
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of query: 112
length of database: 140,377
effective HSP length: 50
effective length of query: 62
effective length of database: 118,927
effective search space:  7373474
effective search space used:  7373474
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.7 bits)
S2: 39 (19.8 bits)